Protein ID | Pro_DTO377G3_2|g5581.t1 |
Gene name | |
Location | scaffold_13:494937..497842 |
Strand | + |
Gene length (bp) | 2905 |
Transcript length (bp) | 2550 |
Coding sequence length (bp) | 2550 |
Protein length (aa) | 850 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10373 | EST1_DNA_bind | Est1 DNA/RNA binding domain | 4.1E-71 | 189 | 471 |
PF10374 | EST1 | Telomerase activating protein Est1 | 2.8E-27 | 59 | 176 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 39.76 | 24.13 | 55.39 |
5d_25C | Five days - 25 degrees Celsius | 52.46 | 32.12 | 72.80 |
7d_25C | Seven days - 25 degrees Celsius | 59.97 | 36.49 | 83.44 |
10d_25C | Ten days - 25 degrees Celsius | 69.98 | 42.77 | 97.20 |
7d_15C | Seven days - 15 degrees Celsius | 49.57 | 30.14 | 69.01 |
7d_30C | Seven days - 30 degrees Celsius | 48.52 | 29.78 | 67.26 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.222094 | no |
3d_25C | 7d_25C | 0.057587 | no |
3d_25C | 7d_15C | 0.368910 | no |
3d_25C | 7d_30C | 0.423623 | no |
3d_25C | 10d_25C | 0.005235 | yes |
5d_25C | 7d_25C | 0.620475 | no |
5d_25C | 7d_15C | 0.854926 | no |
5d_25C | 7d_30C | 0.787876 | no |
5d_25C | 10d_25C | 0.197084 | no |
7d_25C | 7d_15C | 0.453390 | no |
7d_25C | 7d_30C | 0.383303 | no |
7d_25C | 10d_25C | 0.562518 | no |
7d_15C | 7d_30C | 0.950750 | no |
7d_15C | 10d_25C | 0.115405 | no |
7d_30C | 10d_25C | 0.082032 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5581.t1 MAPSFTDAWKTAIEAEKELLQCFSQERRTFDEFEHFLSEFRTSSQNAILLDFNASREADVETRLWDAHLKVNNRF RKQLIRFREEHGKKKPVERRKLERHYLDFIKSSQRFYRGYIQHLSSRFGGIVELERVARKFNFENLSGQPPIKPS KDLRRLILQSCHATLIRLGDLSRYRESELVSKDRNWGPAIGYYDLASVINPASGASQNQLAIIALADGNHLRATY HLYRALSAQEPHPTAKGNLEIELRKIMSAWAKKELIRPEDAGIPGRALTSWFLYLHAKCYKGTDFPEHDELESEV LSQLAVEIRERSLEGTLQKFCLINIAAEDFAKVRSIEESVLEARVFFQRINVKTFFTLLQILLVELERTASFEDP NSKDEMPIPDKVSVVARRILPALRHYSSWLLTNSKSLVEQKEEKDSALSIQIKEFWKIYAGTLSLLASSFDVVSL PEVDYLLEEDEESLGFAPLDQDATSRRYVGSRDQPKPRMHDLGIERSHPNMEMLYRIREFVIDGLDLVVNGKIPV ALVDSEDKKTFIYQEEDLPSQFYSSPHGRQNALPVASIEREDIPQAGQNAYSAAEAQSLFGGSQSASASMSANMH QIVEGVERLVDSDTYETPSNGQFAFMNSGEISTPTHVSPNVNAYPFRNENSPPLTTPMAPPPGLGPPVINTAEPT SAQSYTPRPAIPSIPSIWTPLRDTAPPRTPPGLGPQHGQRAPLHPMASGNAMPSERSPSQDQLANELMLRQHLMA QTQFSSSLDVGSMPTPWASSISHARPTASGWDHGRATFGAFELPSQTMSSSLGHQSWANDAFIASSLAGATPYSS GIGGRKPATQLGAVGQTPPCGQGG* |
Coding | >Pro_DTO377G3_2|g5581.t1 ATGGCGCCCTCGTTCACGGATGCCTGGAAGACTGCAATAGAAGCCGAGAAAGAGCTTCTGCAATGCTTCTCGCAA GAACGGCGCACATTCGATGAATTCGAACATTTCCTCTCCGAGTTCCGAACCTCTTCTCAGAATGCAATCCTCCTC GATTTCAATGCTTCCCGCGAGGCCGATGTGGAGACTCGCCTTTGGGATGCGCACTTGAAAGTGAACAATCGGTTT CGCAAGCAGTTGATTCGCTTTCGCGAAGAGCACGGCAAGAAAAAACCAGTGGAGAGGCGGAAACTCGAACGCCAT TATCTCGATTTCATTAAGTCAAGCCAGCGGTTTTACCGAGGATACATCCAGCACTTGTCGTCGCGATTTGGGGGG ATTGTTGAGTTGGAGAGAGTGGCGCGCAAGTTCAATTTTGAGAATCTGTCCGGCCAACCTCCTATCAAGCCCTCC AAAGACCTGCGTAGGCTGATTCTCCAGTCTTGCCACGCAACTCTTATCCGGCTGGGAGACCTTTCCCGCTATCGT GAATCGGAACTCGTCAGCAAAGATCGCAACTGGGGCCCTGCCATCGGTTATTATGATTTGGCGTCGGTGATCAAC CCTGCTTCGGGTGCATCTCAGAACCAATTGGCAATTATCGCTCTCGCGGATGGAAATCATCTTCGTGCTACCTAC CATCTCTACAGAGCCCTGTCAGCCCAAGAACCCCATCCTACTGCGAAGGGCAATCTGGAGATTGAACTCCGAAAA ATCATGAGTGCTTGGGCTAAGAAAGAGCTGATCCGCCCCGAAGATGCCGGTATCCCTGGAAGGGCCTTGACCTCG TGGTTTCTTTATCTCCATGCCAAATGTTACAAGGGCACCGACTTCCCCGAGCACGATGAGTTGGAGAGTGAAGTT CTCAGTCAACTAGCAGTAGAGATTAGAGAACGATCACTAGAGGGGACACTTCAAAAGTTCTGTCTCATTAATATT GCGGCCGAGGATTTTGCTAAGGTCCGGTCTATTGAAGAGTCTGTCTTAGAAGCACGCGTCTTTTTCCAACGCATC AACGTGAAGACATTTTTCACCTTACTGCAAATACTTTTGGTCGAACTCGAACGAACTGCTTCTTTTGAAGATCCG AACAGCAAAGATGAAATGCCTATCCCAGACAAGGTGTCCGTGGTTGCTCGTCGGATCCTGCCCGCGCTTCGCCAT TACAGCTCCTGGCTGCTTACAAATAGCAAGTCTCTGGTTGAGCAGAAGGAGGAAAAAGATTCGGCGCTCTCGATT CAAATCAAAGAGTTCTGGAAAATCTATGCCGGTACGCTGAGCCTGCTCGCATCCTCGTTTGATGTGGTCAGCCTT CCCGAGGTCGATTATCTATTGGAAGAAGACGAAGAAAGTCTTGGTTTTGCACCTCTAGATCAGGATGCCACTTCT CGCCGATACGTTGGAAGTCGTGATCAGCCAAAGCCCAGGATGCACGATCTTGGGATTGAAAGAAGTCACCCCAAC ATGGAAATGCTCTATCGAATTCGTGAATTCGTGATTGATGGACTCGACTTGGTTGTTAACGGAAAAATACCCGTG GCTCTTGTGGACAGTGAAGACAAGAAGACATTTATCTATCAAGAAGAGGATCTGCCTTCGCAATTCTATTCCAGC CCTCATGGCCGCCAGAATGCACTTCCGGTTGCGAGCATCGAGCGTGAGGATATCCCACAGGCCGGTCAAAATGCA TACTCTGCCGCAGAAGCCCAAAGTCTGTTCGGCGGTTCCCAGTCTGCATCGGCATCTATGTCCGCCAACATGCAT CAGATCGTTGAGGGCGTTGAACGACTTGTTGACTCGGACACGTATGAAACCCCATCCAATGGCCAATTTGCTTTC ATGAATTCGGGGGAGATATCGACACCTACGCATGTCTCACCCAATGTCAATGCTTACCCGTTCCGGAACGAAAAC TCTCCACCACTCACCACTCCCATGGCTCCTCCACCTGGGCTTGGTCCACCAGTCATAAATACAGCTGAGCCTACA TCGGCGCAATCATATACCCCACGGCCTGCCATTCCCAGCATCCCTAGCATTTGGACACCACTGAGAGACACCGCC CCTCCACGAACGCCCCCTGGCCTTGGTCCACAACATGGCCAGCGAGCTCCACTGCACCCCATGGCTTCTGGAAAT GCCATGCCTTCTGAGCGCTCGCCGTCGCAAGATCAGTTAGCAAATGAGCTCATGCTCCGACAGCACTTGATGGCC CAGACCCAGTTTTCAAGCTCACTGGACGTAGGATCAATGCCCACACCGTGGGCATCATCCATCTCTCATGCTCGT CCCACCGCCAGCGGTTGGGATCATGGCCGAGCGACCTTCGGTGCATTCGAACTCCCGAGCCAGACGATGTCCAGC AGCCTGGGACATCAGTCATGGGCCAATGACGCTTTCATCGCCAGCAGCCTCGCTGGGGCAACTCCCTACAGCTCC GGGATTGGCGGGCGCAAGCCTGCAACCCAGCTTGGAGCAGTCGGTCAAACCCCACCCTGTGGCCAAGGAGGCTGA |
Transcript | >Pro_DTO377G3_2|g5581.t1 ATGGCGCCCTCGTTCACGGATGCCTGGAAGACTGCAATAGAAGCCGAGAAAGAGCTTCTGCAATGCTTCTCGCAA GAACGGCGCACATTCGATGAATTCGAACATTTCCTCTCCGAGTTCCGAACCTCTTCTCAGAATGCAATCCTCCTC GATTTCAATGCTTCCCGCGAGGCCGATGTGGAGACTCGCCTTTGGGATGCGCACTTGAAAGTGAACAATCGGTTT CGCAAGCAGTTGATTCGCTTTCGCGAAGAGCACGGCAAGAAAAAACCAGTGGAGAGGCGGAAACTCGAACGCCAT TATCTCGATTTCATTAAGTCAAGCCAGCGGTTTTACCGAGGATACATCCAGCACTTGTCGTCGCGATTTGGGGGG ATTGTTGAGTTGGAGAGAGTGGCGCGCAAGTTCAATTTTGAGAATCTGTCCGGCCAACCTCCTATCAAGCCCTCC AAAGACCTGCGTAGGCTGATTCTCCAGTCTTGCCACGCAACTCTTATCCGGCTGGGAGACCTTTCCCGCTATCGT GAATCGGAACTCGTCAGCAAAGATCGCAACTGGGGCCCTGCCATCGGTTATTATGATTTGGCGTCGGTGATCAAC CCTGCTTCGGGTGCATCTCAGAACCAATTGGCAATTATCGCTCTCGCGGATGGAAATCATCTTCGTGCTACCTAC CATCTCTACAGAGCCCTGTCAGCCCAAGAACCCCATCCTACTGCGAAGGGCAATCTGGAGATTGAACTCCGAAAA ATCATGAGTGCTTGGGCTAAGAAAGAGCTGATCCGCCCCGAAGATGCCGGTATCCCTGGAAGGGCCTTGACCTCG TGGTTTCTTTATCTCCATGCCAAATGTTACAAGGGCACCGACTTCCCCGAGCACGATGAGTTGGAGAGTGAAGTT CTCAGTCAACTAGCAGTAGAGATTAGAGAACGATCACTAGAGGGGACACTTCAAAAGTTCTGTCTCATTAATATT GCGGCCGAGGATTTTGCTAAGGTCCGGTCTATTGAAGAGTCTGTCTTAGAAGCACGCGTCTTTTTCCAACGCATC AACGTGAAGACATTTTTCACCTTACTGCAAATACTTTTGGTCGAACTCGAACGAACTGCTTCTTTTGAAGATCCG AACAGCAAAGATGAAATGCCTATCCCAGACAAGGTGTCCGTGGTTGCTCGTCGGATCCTGCCCGCGCTTCGCCAT TACAGCTCCTGGCTGCTTACAAATAGCAAGTCTCTGGTTGAGCAGAAGGAGGAAAAAGATTCGGCGCTCTCGATT CAAATCAAAGAGTTCTGGAAAATCTATGCCGGTACGCTGAGCCTGCTCGCATCCTCGTTTGATGTGGTCAGCCTT CCCGAGGTCGATTATCTATTGGAAGAAGACGAAGAAAGTCTTGGTTTTGCACCTCTAGATCAGGATGCCACTTCT CGCCGATACGTTGGAAGTCGTGATCAGCCAAAGCCCAGGATGCACGATCTTGGGATTGAAAGAAGTCACCCCAAC ATGGAAATGCTCTATCGAATTCGTGAATTCGTGATTGATGGACTCGACTTGGTTGTTAACGGAAAAATACCCGTG GCTCTTGTGGACAGTGAAGACAAGAAGACATTTATCTATCAAGAAGAGGATCTGCCTTCGCAATTCTATTCCAGC CCTCATGGCCGCCAGAATGCACTTCCGGTTGCGAGCATCGAGCGTGAGGATATCCCACAGGCCGGTCAAAATGCA TACTCTGCCGCAGAAGCCCAAAGTCTGTTCGGCGGTTCCCAGTCTGCATCGGCATCTATGTCCGCCAACATGCAT CAGATCGTTGAGGGCGTTGAACGACTTGTTGACTCGGACACGTATGAAACCCCATCCAATGGCCAATTTGCTTTC ATGAATTCGGGGGAGATATCGACACCTACGCATGTCTCACCCAATGTCAATGCTTACCCGTTCCGGAACGAAAAC TCTCCACCACTCACCACTCCCATGGCTCCTCCACCTGGGCTTGGTCCACCAGTCATAAATACAGCTGAGCCTACA TCGGCGCAATCATATACCCCACGGCCTGCCATTCCCAGCATCCCTAGCATTTGGACACCACTGAGAGACACCGCC CCTCCACGAACGCCCCCTGGCCTTGGTCCACAACATGGCCAGCGAGCTCCACTGCACCCCATGGCTTCTGGAAAT GCCATGCCTTCTGAGCGCTCGCCGTCGCAAGATCAGTTAGCAAATGAGCTCATGCTCCGACAGCACTTGATGGCC CAGACCCAGTTTTCAAGCTCACTGGACGTAGGATCAATGCCCACACCGTGGGCATCATCCATCTCTCATGCTCGT CCCACCGCCAGCGGTTGGGATCATGGCCGAGCGACCTTCGGTGCATTCGAACTCCCGAGCCAGACGATGTCCAGC AGCCTGGGACATCAGTCATGGGCCAATGACGCTTTCATCGCCAGCAGCCTCGCTGGGGCAACTCCCTACAGCTCC GGGATTGGCGGGCGCAAGCCTGCAACCCAGCTTGGAGCAGTCGGTCAAACCCCACCCTGTGGCCAAGGAGGCTGA |
Gene | >Pro_DTO377G3_2|g5581.t1 ATGGCGCCCTCGTTCACGGATGCCTGGAAGTTAGTGCTTTCCCCTCTCGATTTCGGCTGGATTGTGAACATTGAC CAGTGGTGTGATACAGGACTGCAATAGAAGCCGAGAAAGAGCTTCTGCAATGCTTCTCGCAAGAACGGCGCACAT TCGATGAATTCGAACATTTCCTCTCCGAGTCAGTGACAAGCCCCGCGCGCACGCCAACGCATGGCTGACCTCTTT CCTATATAGGTTCCGAACCTCTTCTCAGAATGCAATCCTCCTCGATTTCAATGCTTCCCGCGAGGCCGATGTGGA GACTCGCCTTTGGGATGCGCACTTGAAAGTGAACAATCGGTTTCGCAAGCAGTTGATTCGCGTGAGTACCCCACG GAAGCTTTTCGCAAAGTATATATTCGCTGACTGTGGTTGTCTATCATTAGTTTCGCGAAGAGCACGGCAAGAAAA AACCAGTGGAGAGGCGGAAACTCGAACGCCATTATCTCGATTTCATTAAGTCAAGCCAGCGGTTTTACCGAGGAT ACATCCAGCACTTGTCGTCGCGATTTGGGGGGATTGTTGAGTTGGAGAGAGTGGCGCGCAAGTTCAATTTTGAGA GTAAGGCAGATACACAAGCTGCGCGCCGGGTCTCTAGGCACGCTGACCCGCGTTTGTTTTTAGATCTGTCCGGCC AACCTCCTATCAAGCCCTCCAAAGACCTGCGTAGGCTGATTCTCCAGTCTTGCCACGCAACTCTTATCCGGCTGG GAGACCTTTCCCGCTATCGTGAATCGGAACTCGTCAGCAAAGATCGCAACTGGGGCCCTGCCATCGGTTATTATG ATTTGGCGTCGGTGATCAACCCTGCTTCGGGTGCATCTCAGAACCAATTGGCAATTATCGCTCTCGCGGATGGAA ATCATCTTCGTGCTACCTACCATCTCTACAGAGCCCTGTCAGCCCAAGAACCCCATCCTACTGCGAAGGGCAATC TGGAGATTGAACTCCGAAAAATCATGAGTGCTTGGGCTAAGAAAGAGCTGATCCGCCCCGAAGATGCCGGTATCC CTGGAAGGGCCTTGACCTCGTGGTTTCTTTATCTCCATGCCAAATGTTACAAGGGCACCGACTTCCCCGAGCACG ATGAGTTGGAGAGTGAAGTTCTCAGTCAACTAGCAGTAGAGATTAGAGAACGATCACTAGAGGGGACACTTCAAA AGTTCTGTCTCATTAATATTGCGGCCGAGGATTTTGCTAAGGTCCGGTCTATTGGTAAGAGCTCGAAACATTATC ATTGCTCATACATCTGCTTACTTATCTTAGAAGAGTCTGTCTTAGAAGCACGCGTCTTTTTCCAACGCATCAACG TGAAGACATTTTTCACCTTACTGCAAATACTTTTGGTCGAACTCGAACGAACTGCTTCTTTTGAAGATCCGAACA GCAAAGATGAAATGCCTATCCCAGACAAGGTGTCCGTGGTTGCTCGTCGGATCCTGCCCGCGCTTCGCCATTACA GCTCCTGGCTGCTTACAAATAGCAAGTCTCTGGTTGAGCAGAAGGAGGAAAAAGATTCGGCGCTCTCGATTCAAA TCAAAGAGTTCTGGAAAATCTATGCCGGTACGCTGAGCCTGCTCGCATCCTCGTTTGATGTGGTCAGCCTTCCCG AGGTCGATTATCTATTGGAAGAAGACGAAGAAAGTCTTGGTTTTGCACCTCTAGATCAGGATGCCACTTCTCGCC GATACGTTGGAAGTCGTGATCAGCCAAAGCCCAGGATGCACGATCTTGGGATTGAAAGAAGTCACCCCAACATGG AAATGCTCTATCGAATTCGTGAATTCGTGATTGATGGACTCGACTTGGTTGTTAACGGAGTATGTGGAAAGCTCT GAAGATATTATAAACAAACAAGCAGATTGCTAACCTCGTTTAGAAAATACCCGTGGCTCTTGTGGACAGTGAAGA CAAGAAGACATTTATCTATCAAGAAGAGGATCTGCCTTCGCAATTCTATTCCAGCCCTCATGGCCGCCAGAATGC ACTTCCGGTTGCGAGCATCGAGCGTGAGGATATCCCACAGGCCGGTCAAAATGCATACTCTGCCGCAGAAGCCCA AAGTCTGTTCGGCGGTTCCCAGTCTGCATCGGCATCTATGTCCGCCAACATGCATCAGATCGTTGAGGGCGTTGA ACGACTTGTTGACTCGGACACGTATGAAACCCCATCCAATGGCCAATTTGCTTTCATGAATTCGGGGGAGATATC GACACCTACGCATGTCTCACCCAATGTCAATGCTTACCCGTTCCGGAACGAAAACTCTCCACCACTCACCACTCC CATGGCTCCTCCACCTGGGCTTGGTCCACCAGTCATAAATACAGCTGAGCCTACATCGGCGCAATCATATACCCC ACGGCCTGCCATTCCCAGCATCCCTAGCATTTGGACACCACTGAGAGACACCGCCCCTCCACGAACGCCCCCTGG CCTTGGTCCACAACATGGCCAGCGAGCTCCACTGCACCCCATGGCTTCTGGAAATGCCATGCCTTCTGAGCGCTC GCCGTCGCAAGATCAGTTAGCAAATGAGCTCATGCTCCGACAGCACTTGATGGCCCAGACCCAGTTTTCAAGCTC ACTGGACGTAGGATCAATGCCCACACCGTGGGCATCATCCATCTCTCATGCTCGTCCCACCGCCAGCGGTTGGGA TCATGGCCGAGCGACCTTCGGTGCATTCGAACTCCCGAGCCAGACGATGTCCAGCAGCCTGGGACATCAGTCATG GGCCAATGACGCTTTCATCGCCAGCAGCCTCGCTGGGGCAACTCCCTACAGCTCCGGGATTGGCGGGCGCAAGCC TGCAACCCAGCTTGGAGCAGTCGGTCAAACCCCACCCTGTGGCCAAGGAGGCTGA |