Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g558.t1
Gene name
Locationscaffold_01:1436949..1437886
Strand-
Gene length (bp)937
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06428 Sec2p GDP/GTP exchange factor Sec2p 4.6E-09 177 246

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g558.t1
MSTTSVTTLVIPAMKGVVISENKCPMCWGEGFPQDGSGAHDRIQELEGQVHTLTARALAAASKLSEYEDELRRLR
ASQPQGAYHTPRSSSSLGRPPSRADHSSPQRPTSSESQSQRQTYHSRLTNLASFLPYRRGSATPAPAASSGPLPS
TPTALGTPLLHMSPANSEHTSELQDALAREQKLREAAESQLSLASTELEELTVQLFSQANEMVAEERKARAKLEE
RVAVLEKRDVEKRGRLERLENAVARVERLRALVNQ*
Coding >Pro_DTO377G3_2|g558.t1
ATGTCAACAACATCCGTCACCACGCTTGTCATACCGGCCATGAAGGGTGTCGTTATATCAGAAAATAAATGTCCC
ATGTGTTGGGGTGAAGGCTTTCCCCAAGATGGTTCTGGCGCCCACGATAGAATCCAGGAGTTGGAGGGGCAAGTG
CATACGTTGACAGCGCGCGCTTTGGCTGCAGCCTCCAAACTTAGCGAGTACGAAGACGAACTCCGCCGTCTCCGC
GCCTCCCAGCCCCAAGGAGCCTACCACACCCCGCGCAGCAGCTCTTCACTGGGAAGACCCCCCTCCCGAGCCGAC
CATTCATCACCACAGCGCCCAACATCCTCAGAATCTCAATCCCAACGACAAACATACCACAGCCGCCTCACAAAC
CTAGCCTCCTTCCTCCCCTACCGACGTGGCAGCGCAACCCCCGCACCAGCAGCATCCAGCGGCCCCCTCCCAAGT
ACCCCGACCGCGCTGGGAACACCACTCCTACACATGTCCCCCGCGAACAGCGAGCACACCTCCGAGCTGCAGGAT
GCGCTTGCGCGCGAGCAGAAACTGCGCGAGGCTGCCGAGTCGCAACTCTCGCTGGCGAGTACCGAGCTAGAGGAG
TTGACGGTGCAGCTTTTCAGTCAGGCAAATGAGATGGTCGCAGAGGAGCGCAAGGCTCGCGCGAAGCTTGAGGAG
AGGGTTGCTGTGCTGGAAAAGAGGGATGTGGAGAAGCGCGGTCGGTTGGAGAGGTTGGAGAATGCTGTGGCGCGC
GTGGAGCGATTGAGGGCATTGGTTAATCAATGA
Transcript >Pro_DTO377G3_2|g558.t1
ATGTCAACAACATCCGTCACCACGCTTGTCATACCGGCCATGAAGGGTGTCGTTATATCAGAAAATAAATGTCCC
ATGTGTTGGGGTGAAGGCTTTCCCCAAGATGGTTCTGGCGCCCACGATAGAATCCAGGAGTTGGAGGGGCAAGTG
CATACGTTGACAGCGCGCGCTTTGGCTGCAGCCTCCAAACTTAGCGAGTACGAAGACGAACTCCGCCGTCTCCGC
GCCTCCCAGCCCCAAGGAGCCTACCACACCCCGCGCAGCAGCTCTTCACTGGGAAGACCCCCCTCCCGAGCCGAC
CATTCATCACCACAGCGCCCAACATCCTCAGAATCTCAATCCCAACGACAAACATACCACAGCCGCCTCACAAAC
CTAGCCTCCTTCCTCCCCTACCGACGTGGCAGCGCAACCCCCGCACCAGCAGCATCCAGCGGCCCCCTCCCAAGT
ACCCCGACCGCGCTGGGAACACCACTCCTACACATGTCCCCCGCGAACAGCGAGCACACCTCCGAGCTGCAGGAT
GCGCTTGCGCGCGAGCAGAAACTGCGCGAGGCTGCCGAGTCGCAACTCTCGCTGGCGAGTACCGAGCTAGAGGAG
TTGACGGTGCAGCTTTTCAGTCAGGCAAATGAGATGGTCGCAGAGGAGCGCAAGGCTCGCGCGAAGCTTGAGGAG
AGGGTTGCTGTGCTGGAAAAGAGGGATGTGGAGAAGCGCGGTCGGTTGGAGAGGTTGGAGAATGCTGTGGCGCGC
GTGGAGCGATTGAGGGCATTGGTTAATCAATGA
Gene >Pro_DTO377G3_2|g558.t1
ATGTCAACAACATCCGTCACCACGCTTGTCATACCGGCCATGAAGGGTGTCGTTATATCAGAAAATAAATGTCCC
ATGTGTTGGGGTGAAGGCTTTCCCCAAGATGGTTCTGGCGCCCACGATAGAATCCAGGAGTTGGAGGGGCAAGTG
CATACGTTGACAGCGCGCGCTTTGGCTGCAGGTAAGCCTGTGAAGGATCTCTACAGACTACATACACACAAGTGT
AGCATGAATGCGATCCCGCGTCTACAGAGAAGACAATACTTTCCCCCCCTTCCCCTTCTTCCAATCCAACCCTTA
AAAACAAGAATCCCCGCTAACCCGATCGCAAACAGCCTCCAAACTTAGCGAGTACGAAGACGAACTCCGCCGTCT
CCGCGCCTCCCAGCCCCAAGGAGCCTACCACACCCCGCGCAGCAGCTCTTCACTGGGAAGACCCCCCTCCCGAGC
CGACCATTCATCACCACAGCGCCCAACATCCTCAGAATCTCAATCCCAACGACAAACATACCACAGCCGCCTCAC
AAACCTAGCCTCCTTCCTCCCCTACCGACGTGGCAGCGCAACCCCCGCACCAGCAGCATCCAGCGGCCCCCTCCC
AAGTACCCCGACCGCGCTGGGAACACCACTCCTACACATGTCCCCCGCGAACAGCGAGCACACCTCCGAGCTGCA
GGATGCGCTTGCGCGCGAGCAGAAACTGCGCGAGGCTGCCGAGTCGCAACTCTCGCTGGCGAGTACCGAGCTAGA
GGAGTTGACGGTGCAGCTTTTCAGTCAGGCAAATGAGATGGTCGCAGAGGAGCGCAAGGCTCGCGCGAAGCTTGA
GGAGAGGGTTGCTGTGCTGGAAAAGAGGGATGTGGAGAAGCGCGGTCGGTTGGAGAGGTTGGAGAATGCTGTGGC
GCGCGTGGAGCGATTGAGGGCATTGGTTAATCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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