Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5577.t1
Gene name
Locationscaffold_13:483347..484580
Strand+
Gene length (bp)1233
Transcript length (bp)1071
Coding sequence length (bp)1071
Protein length (aa) 357

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00673 Ribosomal_L5_C ribosomal L5P family C-terminus 2.6E-29 252 350

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5577.t1
MAAREPCRYLTRALPRASVPSIRPQGFFSSRNVSDEAPARRLSDHLTELETASSLSTPVPDSAAASFDPLARASA
RKTQLPRGRYQFRSPKYNRGPLHPHQPPPPSDPSSRLFVPGPFSAPRAEQTFDSTVSPDIMTLCYVHTPPGFKPP
PKSARLREWDDSSPYHKNRVLRGPRGGDVLRLLRKPIKFNNIPEIERITIHSYVKNAAAERNSSWLHVAGIAIQA
ISNVRVQTFKSKSNVAPWGIAANRDSVAVKAELYGENMYHFFGKLVDVVLPRIKDWEGVKGSSGDSSGNITFGLI
PENVALFPELEVNYDMYPPKMIPGCHITLHTTAKTDKDARLLLSAMGIPFYGKIVN*
Coding >Pro_DTO377G3_2|g5577.t1
ATGGCTGCCAGAGAGCCGTGCAGATACCTAACAAGGGCATTGCCCCGGGCCTCAGTGCCATCAATTCGCCCTCAA
GGCTTTTTCTCGAGCCGCAATGTCTCTGATGAAGCCCCAGCCAGGCGTCTGTCGGACCACCTAACCGAGCTAGAA
ACGGCGTCGTCGCTGTCAACACCTGTCCCAGACAGCGCAGCAGCATCGTTCGATCCGCTTGCACGAGCATCCGCT
CGCAAGACCCAGCTTCCCCGAGGCCGATACCAATTCCGCTCCCCCAAATACAACCGTGGTCCCCTCCACCCTCAC
CAACCGCCGCCACCATCCGACCCCTCCTCCCGGCTGTTCGTGCCAGGCCCATTCTCCGCGCCCCGAGCAGAGCAG
ACCTTCGACTCAACCGTCTCCCCCGACATTATGACCCTGTGCTACGTGCACACGCCACCAGGCTTCAAGCCGCCG
CCGAAATCGGCCCGTCTCCGCGAGTGGGACGACAGCTCGCCATATCACAAGAACCGTGTCCTCCGCGGTCCCCGT
GGCGGCGACGTCCTGCGCCTGCTCCGCAAGCCGATCAAGTTCAACAACATCCCGGAAATCGAGCGCATCACAATC
CACAGCTATGTCAAGAATGCCGCGGCTGAGCGGAACTCGTCTTGGCTGCACGTCGCTGGTATTGCCATTCAGGCC
ATCTCCAATGTGCGCGTTCAGACTTTCAAGTCCAAGTCTAACGTTGCTCCTTGGGGTATTGCGGCGAACCGTGAC
TCCGTCGCTGTAAAGGCAGAGCTGTATGGCGAGAACATGTACCACTTCTTTGGTAAGCTGGTTGATGTCGTCTTG
CCCCGTATCAAGGATTGGGAGGGTGTCAAGGGGTCCAGTGGTGATAGCAGTGGTAACATCACTTTCGGTCTGATT
CCGGAGAATGTTGCTCTTTTCCCGGAGCTTGAGGTCAACTACGATATGTATCCTCCTAAGATGATCCCCGGTTGC
CACATCACTCTCCACACTACCGCCAAGACCGACAAGGATGCACGACTTCTGTTGAGTGCCATGGGTATTCCTTTC
TACGGCAAGATCGTGAACTAA
Transcript >Pro_DTO377G3_2|g5577.t1
ATGGCTGCCAGAGAGCCGTGCAGATACCTAACAAGGGCATTGCCCCGGGCCTCAGTGCCATCAATTCGCCCTCAA
GGCTTTTTCTCGAGCCGCAATGTCTCTGATGAAGCCCCAGCCAGGCGTCTGTCGGACCACCTAACCGAGCTAGAA
ACGGCGTCGTCGCTGTCAACACCTGTCCCAGACAGCGCAGCAGCATCGTTCGATCCGCTTGCACGAGCATCCGCT
CGCAAGACCCAGCTTCCCCGAGGCCGATACCAATTCCGCTCCCCCAAATACAACCGTGGTCCCCTCCACCCTCAC
CAACCGCCGCCACCATCCGACCCCTCCTCCCGGCTGTTCGTGCCAGGCCCATTCTCCGCGCCCCGAGCAGAGCAG
ACCTTCGACTCAACCGTCTCCCCCGACATTATGACCCTGTGCTACGTGCACACGCCACCAGGCTTCAAGCCGCCG
CCGAAATCGGCCCGTCTCCGCGAGTGGGACGACAGCTCGCCATATCACAAGAACCGTGTCCTCCGCGGTCCCCGT
GGCGGCGACGTCCTGCGCCTGCTCCGCAAGCCGATCAAGTTCAACAACATCCCGGAAATCGAGCGCATCACAATC
CACAGCTATGTCAAGAATGCCGCGGCTGAGCGGAACTCGTCTTGGCTGCACGTCGCTGGTATTGCCATTCAGGCC
ATCTCCAATGTGCGCGTTCAGACTTTCAAGTCCAAGTCTAACGTTGCTCCTTGGGGTATTGCGGCGAACCGTGAC
TCCGTCGCTGTAAAGGCAGAGCTGTATGGCGAGAACATGTACCACTTCTTTGGTAAGCTGGTTGATGTCGTCTTG
CCCCGTATCAAGGATTGGGAGGGTGTCAAGGGGTCCAGTGGTGATAGCAGTGGTAACATCACTTTCGGTCTGATT
CCGGAGAATGTTGCTCTTTTCCCGGAGCTTGAGGTCAACTACGATATGTATCCTCCTAAGATGATCCCCGGTTGC
CACATCACTCTCCACACTACCGCCAAGACCGACAAGGATGCACGACTTCTGTTGAGTGCCATGGGTATTCCTTTC
TACGGCAAGATCGTGAACTAA
Gene >Pro_DTO377G3_2|g5577.t1
ATGGCTGCCAGAGAGCCGTGCAGATACCTAACAAGGGCATTGCCCCGGGCCTCAGTGCCATCAATTCGCCCTCAA
GGCTTTTTCTCGAGCCGCAATGTCTCTGATGAAGCCCCAGCCAGGCGTCTGTCGGACCACCTAACCGAGCTAGAA
ACGGCGTCGTCGCTGTCAACACCTGTCCCAGACAGCGCAGCAGCATCGTTCGATCCGCTTGCACGAGCATCCGCT
CGCAAGACCCAGCTTCCCCGAGGCCGGTAAGAGCACTCCGACTACATCTTCGGTCATGCGCATCTGCAGACATGA
AAACAACATCGAACATACTCAATGAACAATAACTAACTCCGACACCTTATCACAGATACCAATTCCGCTCCCCCA
AATACAACCGTGGTCCCCTCCACCCTCACCAACCGCCGCCACCATCCGACCCCTCCTCCCGGCTGTTCGTGCCAG
GCCCATTCTCCGCGCCCCGAGCAGAGCAGACCTTCGACTCAACCGTCTCCCCCGACATTATGACCCTGTGCTACG
TGCACACGCCACCAGGCTTCAAGCCGCCGCCGAAATCGGCCCGTCTCCGCGAGTGGGACGACAGCTCGCCATATC
ACAAGAACCGTGTCCTCCGCGGTCCCCGTGGCGGCGACGTCCTGCGCCTGCTCCGCAAGCCGATCAAGTTCAACA
ACATCCCGGAAATCGAGCGCATCACAATCCACAGCTATGTCAAGAATGCCGCGGCTGAGCGGAACTCGTCTTGGC
TGCACGTCGCTGGTATTGCCATTCAGGCCATCTCCAATGTGCGCGTTCAGACTTTCAAGTCCAAGTCTAACGTTG
CTCCTTGGGGTATTGCGGCGAACCGTGACTCCGTCGCTGTAAAGGCAGAGCTGTATGGCGAGAACATGTACCACT
TCTTTGGTAAGCTGGTTGATGTCGTCTTGCCCCGTATCAAGGATTGGGAGGGTGTCAAGGGGTCCAGTGGTGATA
GCAGTGGTAACATCACTTTCGGTCTGATTCCGGAGAATGTTGCTCTTTTCCCGGAGCTTGAGGTCAACTACGATA
TGTAAGTGTTCTCTATTCTATGTTTCTATTGTCTTGTCAAGGCTAACCCTGCTTCATAGGTATCCTCCTAAGATG
ATCCCCGGTTGCCACATCACTCTCCACACTACCGCCAAGACCGACAAGGATGCACGACTTCTGTTGAGTGCCATG
GGTATTCCTTTCTACGGCAAGATCGTGAACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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