Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5570.t1
Gene name
Locationscaffold_13:458459..460003
Strand-
Gene length (bp)1544
Transcript length (bp)1341
Coding sequence length (bp)1341
Protein length (aa) 447

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 5.2E-29 260 411
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 1.0E-19 146 248
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 1.2E-13 17 141
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 2.3E-11 277 385

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5570.t1
MSASSRIPPIAQPFVSEQAKRTLDLVEEFVEKDCIPADIVFSAQLGEGEQRWKTNPAILESLKEKAKKIGLWNMF
LPKNHFSQGAGFSNLEYGLMAELLGKSKIASEATNNAAPDTGNMEVFAKYGNDAQKKQWLEPLLEGKIRSAFLMT
EPEVASSDATNIELDIRREGNEYVLNGSKWWSSGAGDPRCAIYLVMGKTDASNPDTYKQQSVILVPAGLPGITVH
RMLTVYGYDDAPHGHGHISFKDVRVPASNMVLGEGRGFEIIQGRLGPGRIHHAMRSIGAAERALEWLIARVNDER
KMTFGKPLVAHGVILEWIAKSRIEVDAARFVVLNAAIKIDQGNAKGALKEIAQAKVLVPQTALTIIDRAVQAYGA
AGICQDTPLAYMWAMIRTLRIADGPDEVHLQQLGKRENKTRKDAVIAKLNWQRAEADRLLVASGFKPKSHL*
Coding >Pro_DTO377G3_2|g5570.t1
ATGTCCGCTTCTTCTCGTATTCCGCCCATTGCCCAGCCGTTCGTCAGCGAACAGGCCAAGCGGACCCTCGATCTG
GTCGAAGAATTCGTCGAAAAAGATTGCATCCCTGCCGATATCGTCTTCTCAGCCCAGCTTGGCGAGGGGGAGCAG
CGATGGAAGACCAACCCCGCCATCTTGGAGTCCCTGAAGGAGAAGGCCAAGAAGATCGGGCTGTGGAACATGTTC
CTGCCTAAGAACCACTTCAGCCAGGGCGCTGGATTCTCAAACTTGGAGTATGGATTGATGGCCGAGTTGCTCGGC
AAAAGCAAAATTGCCTCGGAGGCTACCAACAATGCTGCCCCAGATACCGGCAACATGGAGGTGTTCGCCAAGTAT
GGTAACGACGCACAAAAGAAGCAGTGGCTTGAGCCTCTGTTAGAGGGCAAGATCCGCTCTGCTTTCCTAATGACC
GAGCCGGAAGTTGCCTCTAGCGATGCGACAAATATCGAGCTTGACATTCGCCGTGAGGGCAACGAGTACGTCCTT
AATGGCTCGAAATGGTGGTCCTCCGGCGCCGGCGATCCCCGCTGCGCAATCTACCTCGTAATGGGCAAGACCGAC
GCCTCCAACCCAGACACCTACAAGCAGCAGTCCGTCATCCTCGTCCCCGCCGGACTCCCCGGCATCACAGTGCAC
CGCATGTTGACAGTATACGGGTACGACGACGCACCCCACGGCCACGGCCACATCTCATTCAAAGACGTGCGCGTG
CCAGCCTCAAACATGGTCCTCGGCGAAGGCCGCGGCTTCGAGATCATCCAGGGCCGCCTGGGACCCGGCCGCATC
CACCACGCGATGCGGTCGATTGGCGCCGCCGAGCGCGCGCTCGAGTGGCTGATTGCCCGCGTCAACGACGAGCGC
AAGATGACCTTCGGCAAGCCTCTAGTCGCGCACGGCGTGATCCTCGAGTGGATTGCCAAGTCGCGCATTGAGGTC
GATGCCGCCCGCTTCGTGGTCTTGAACGCTGCTATCAAGATCGATCAGGGTAATGCCAAGGGCGCGCTCAAGGAG
ATTGCTCAGGCCAAGGTGCTTGTTCCTCAGACTGCGCTTACTATCATCGATCGCGCGGTGCAGGCTTATGGTGCA
GCTGGTATTTGCCAGGATACCCCGCTTGCGTATATGTGGGCTATGATTCGTACGCTGCGCATTGCGGATGGTCCG
GATGAGGTCCACTTGCAGCAGCTGGGTAAGCGGGAGAACAAGACTCGCAAGGATGCGGTTATTGCCAAGTTGAAT
TGGCAGCGGGCGGAGGCGGATCGCTTGCTTGTTGCTTCTGGGTTCAAGCCTAAGAGCCATCTTTGA
Transcript >Pro_DTO377G3_2|g5570.t1
ATGTCCGCTTCTTCTCGTATTCCGCCCATTGCCCAGCCGTTCGTCAGCGAACAGGCCAAGCGGACCCTCGATCTG
GTCGAAGAATTCGTCGAAAAAGATTGCATCCCTGCCGATATCGTCTTCTCAGCCCAGCTTGGCGAGGGGGAGCAG
CGATGGAAGACCAACCCCGCCATCTTGGAGTCCCTGAAGGAGAAGGCCAAGAAGATCGGGCTGTGGAACATGTTC
CTGCCTAAGAACCACTTCAGCCAGGGCGCTGGATTCTCAAACTTGGAGTATGGATTGATGGCCGAGTTGCTCGGC
AAAAGCAAAATTGCCTCGGAGGCTACCAACAATGCTGCCCCAGATACCGGCAACATGGAGGTGTTCGCCAAGTAT
GGTAACGACGCACAAAAGAAGCAGTGGCTTGAGCCTCTGTTAGAGGGCAAGATCCGCTCTGCTTTCCTAATGACC
GAGCCGGAAGTTGCCTCTAGCGATGCGACAAATATCGAGCTTGACATTCGCCGTGAGGGCAACGAGTACGTCCTT
AATGGCTCGAAATGGTGGTCCTCCGGCGCCGGCGATCCCCGCTGCGCAATCTACCTCGTAATGGGCAAGACCGAC
GCCTCCAACCCAGACACCTACAAGCAGCAGTCCGTCATCCTCGTCCCCGCCGGACTCCCCGGCATCACAGTGCAC
CGCATGTTGACAGTATACGGGTACGACGACGCACCCCACGGCCACGGCCACATCTCATTCAAAGACGTGCGCGTG
CCAGCCTCAAACATGGTCCTCGGCGAAGGCCGCGGCTTCGAGATCATCCAGGGCCGCCTGGGACCCGGCCGCATC
CACCACGCGATGCGGTCGATTGGCGCCGCCGAGCGCGCGCTCGAGTGGCTGATTGCCCGCGTCAACGACGAGCGC
AAGATGACCTTCGGCAAGCCTCTAGTCGCGCACGGCGTGATCCTCGAGTGGATTGCCAAGTCGCGCATTGAGGTC
GATGCCGCCCGCTTCGTGGTCTTGAACGCTGCTATCAAGATCGATCAGGGTAATGCCAAGGGCGCGCTCAAGGAG
ATTGCTCAGGCCAAGGTGCTTGTTCCTCAGACTGCGCTTACTATCATCGATCGCGCGGTGCAGGCTTATGGTGCA
GCTGGTATTTGCCAGGATACCCCGCTTGCGTATATGTGGGCTATGATTCGTACGCTGCGCATTGCGGATGGTCCG
GATGAGGTCCACTTGCAGCAGCTGGGTAAGCGGGAGAACAAGACTCGCAAGGATGCGGTTATTGCCAAGTTGAAT
TGGCAGCGGGCGGAGGCGGATCGCTTGCTTGTTGCTTCTGGGTTCAAGCCTAAGAGCCATCTTTGA
Gene >Pro_DTO377G3_2|g5570.t1
ATGTCCGCTTCTTCTCGTATTCCGCCCATTGCCCAGCCGTTCGTCAGCGAACAGGCCAAGCGGACCCTCGATCTG
GTAATTTATTTCCAATATCCGCAAATCACCAATATTCAGCGCTAACATGACTCCAGGTCGAAGAATTCGTCGAAA
AAGATTGCATCCCTGCCGATATCGTCTTCTCAGCCCAGCTTGGCGAGGGGGAGCAGCGATGGAAGACCAACCCCG
CCATCTTGGAGTCCCTGAAGGAGAAGGCCAAGAAGATCGGGCTGTGGAACATGTTCCTGCCTAAGAACCACTTCA
GCCAGGGCGCTGGATTCTCAAACTTGGAGTATGGATTGATGGCCGAGTTGCTCGGCAAAAGCAAAATTGCCTCGG
AGGTGAGTTATTCTATTTTGTCTGGCGCATTGCTTTACTTGCTGGGCAGGTCTTGCAAATTGATACGATTGATCG
CTGACTATTGCTTCTTATCAGGCTACCAACAATGCTGCCCCAGATACCGGCAACATGGAGGTGTTCGCCAAGTAT
GGTAACGACGCACAAAAGAAGCAGTGGCTTGAGCCTCTGTTAGAGGGCAAGATCCGCTCTGCTTTCCTAATGACC
GAGCCGGAAGTTGCCTCTAGCGATGCGACAAATATCGAGCTTGACATTCGCCGTGAGGGCAACGAGTACGTCCTT
AATGGCTCGGTGTGTACCTCTACAATCCCCTTCTCATCCTCAACATCTAACAGCCAATACAGAAATGGTGGTCCT
CCGGCGCCGGCGATCCCCGCTGCGCAATCTACCTCGTAATGGGCAAGACCGACGCCTCCAACCCAGACACCTACA
AGCAGCAGTCCGTCATCCTCGTCCCCGCCGGACTCCCCGGCATCACAGTGCACCGCATGTTGACAGTATACGGGT
ACGACGACGCACCCCACGGCCACGGCCACATCTCATTCAAAGACGTGCGCGTGCCAGCCTCAAACATGGTCCTCG
GCGAAGGCCGCGGCTTCGAGATCATCCAGGGCCGCCTGGGACCCGGCCGCATCCACCACGCGATGCGGTCGATTG
GCGCCGCCGAGCGCGCGCTCGAGTGGCTGATTGCCCGCGTCAACGACGAGCGCAAGATGACCTTCGGCAAGCCTC
TAGTCGCGCACGGCGTGATCCTCGAGTGGATTGCCAAGTCGCGCATTGAGGTCGATGCCGCCCGCTTCGTGGTCT
TGAACGCTGCTATCAAGATCGATCAGGGTAATGCCAAGGGCGCGCTCAAGGAGATTGCTCAGGCCAAGGTGCTTG
TTCCTCAGACTGCGCTTACTATCATCGATCGCGCGGTGCAGGCTTATGGTGCAGCTGGTATTTGCCAGGATACCC
CGCTTGCGTATATGTGGGCTATGATTCGTACGCTGCGCATTGCGGATGGTCCGGATGAGGTCCACTTGCAGCAGC
TGGGTAAGCGGGAGAACAAGACTCGCAAGGATGCGGTTATTGCCAAGTTGAATTGGCAGCGGGCGGAGGCGGATC
GCTTGCTTGTTGCTTCTGGGTTCAAGCCTAAGAGCCATCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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