Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5567.t1
Gene name
Locationscaffold_13:452993..453743
Strand+
Gene length (bp)750
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13419 HAD_2 Haloacid dehalogenase-like hydrolase 3.0E-20 22 216
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 2.7E-09 22 210
PF12710 HAD haloacid dehalogenase-like hydrolase 2.6E-07 22 209

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5567.t1
MTTLKYPMSIQGIILSKFWFGFDLDDTLHEFRRASANASVRVFETIHASNNKTSVDTLKNTYQDILRNTTANAFT
DGRTSSEYRRERFGRLLQTHGLTDDSFLSRLLEVYRDSLRENLTLKPGGLHLLQTLRELGKKIIVITEGPADAQE
WTVQELGIRPYIDVLVTTNEVGKSKIDGLFGAVLEKYGIAAEDIVYFGDNAIRDVQAARQEGILAVLYDEKQQSR
FYDISALRVDSWAIVEKVLVHGDI*
Coding >Pro_DTO377G3_2|g5567.t1
ATGACCACTCTGAAATACCCCATGTCTATCCAAGGAATTATCCTCTCAAAATTCTGGTTCGGCTTCGATCTAGAT
GACACGCTCCACGAATTCCGACGGGCCTCTGCCAATGCCTCGGTCCGCGTCTTCGAAACGATTCACGCCTCAAAC
AACAAGACCAGCGTTGATACTCTCAAGAATACATACCAAGATATCCTGCGCAATACAACCGCAAACGCCTTCACA
GATGGGAGGACTTCAAGCGAGTATCGGCGCGAACGGTTCGGGCGTCTTCTCCAGACGCACGGGCTCACTGATGAC
TCTTTCCTGAGTCGTCTGTTAGAGGTATATCGAGACTCTCTACGCGAAAACTTGACTCTCAAGCCGGGTGGATTG
CATCTTTTGCAAACTTTGCGAGAACTGGGAAAGAAAATCATTGTCATTACTGAGGGTCCGGCGGATGCGCAGGAG
TGGACAGTCCAGGAACTCGGGATACGGCCTTACATTGATGTGCTTGTGACGACGAACGAGGTCGGGAAGTCTAAG
ATTGATGGGCTGTTTGGTGCCGTGCTGGAGAAATATGGTATCGCCGCTGAAGATATTGTATACTTCGGTGATAAT
GCGATTCGCGATGTTCAGGCTGCGCGGCAGGAAGGGATCCTGGCTGTTCTTTATGATGAAAAGCAGCAGTCTCGT
TTCTACGATATCAGTGCATTACGAGTGGATTCGTGGGCTATTGTAGAAAAAGTACTCGTCCATGGAGACATATAG
Transcript >Pro_DTO377G3_2|g5567.t1
ATGACCACTCTGAAATACCCCATGTCTATCCAAGGAATTATCCTCTCAAAATTCTGGTTCGGCTTCGATCTAGAT
GACACGCTCCACGAATTCCGACGGGCCTCTGCCAATGCCTCGGTCCGCGTCTTCGAAACGATTCACGCCTCAAAC
AACAAGACCAGCGTTGATACTCTCAAGAATACATACCAAGATATCCTGCGCAATACAACCGCAAACGCCTTCACA
GATGGGAGGACTTCAAGCGAGTATCGGCGCGAACGGTTCGGGCGTCTTCTCCAGACGCACGGGCTCACTGATGAC
TCTTTCCTGAGTCGTCTGTTAGAGGTATATCGAGACTCTCTACGCGAAAACTTGACTCTCAAGCCGGGTGGATTG
CATCTTTTGCAAACTTTGCGAGAACTGGGAAAGAAAATCATTGTCATTACTGAGGGTCCGGCGGATGCGCAGGAG
TGGACAGTCCAGGAACTCGGGATACGGCCTTACATTGATGTGCTTGTGACGACGAACGAGGTCGGGAAGTCTAAG
ATTGATGGGCTGTTTGGTGCCGTGCTGGAGAAATATGGTATCGCCGCTGAAGATATTGTATACTTCGGTGATAAT
GCGATTCGCGATGTTCAGGCTGCGCGGCAGGAAGGGATCCTGGCTGTTCTTTATGATGAAAAGCAGCAGTCTCGT
TTCTACGATATCAGTGCATTACGAGTGGATTCGTGGGCTATTGTAGAAAAAGTACTCGTCCATGGAGACATATAG
Gene >Pro_DTO377G3_2|g5567.t1
ATGACCACTCTGAAATACCCCATGTCTATCCAAGGAATTATCCTCTCAAAATTCTGGTTCGGCTTCGATCTAGAT
GACACGCTCCACGAATTCCGACGGGCCTCTGCCAATGCCTCGGTCCGCGTCTTCGAAACGATTCACGCCTCAAAC
AACAAGACCAGCGTTGATACTCTCAAGAATACATACCAAGATATCCTGCGCAATACAACCGCAAACGCCTTCACA
GATGGGAGGACTTCAAGCGAGTATCGGCGCGAACGGTTCGGGCGTCTTCTCCAGACGCACGGGCTCACTGATGAC
TCTTTCCTGAGTCGTCTGTTAGAGGTATATCGAGACTCTCTACGCGAAAACTTGACTCTCAAGCCGGGTGGATTG
CATCTTTTGCAAACTTTGCGAGAACTGGGAAAGAAAATCATTGTCATTACTGAGGGTCCGGCGGATGCGCAGGAG
TGGACAGTCCAGGAACTCGGGATACGGCCTTACATTGATGTGCTTGTGACGACGAACGAGGTCGGGAAGTCTAAG
ATTGATGGGCTGTTTGGTGCCGTGCTGGAGAAATATGGTATCGCCGCTGAAGATATTGTATACTTCGGTGATAAT
GCGATTCGCGATGTTCAGGCTGCGCGGCAGGAAGGGATCCTGGCTGTTCTTTATGATGAAAAGCAGCAGTCTCGT
TTCTACGATATCAGTGCATTACGAGTGGATTCGTGGGCTATTGTAGAAAAAGTACTCGTCCATGGAGACATATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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