Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5567.t1
Gene name
Location	scaffold_13:452993..453743
Strand	+
Gene length (bp)	750
Transcript length (bp)	750
Coding sequence length (bp)	750
Protein length (aa)	250

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13419	HAD_2	Haloacid dehalogenase-like hydrolase	3.3E-20	22	215
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	2.9E-09	22	210
PF12710	HAD	haloacid dehalogenase-like hydrolase	1.2E-07	22	209

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5567.t1 MTTLKYPMSIQGIILSKFWFGFDLDDTLHEFRRASANASVRVFETIHASNNKTSVDTLKNTYQDILRNTTANAFT DGRTSSEYRRERFGRLLQTHGLTDDSFLSRLLEVYRDSLRENLTLKPGGLHLLQTLRELGKKIIVITEGPADAQE WTVQELGIRPYIDVLVTTNEVGKSKIDGLFGAVLEKYGIAAEDIVYFGDNAIRDVQAARQEGILAVLYDEKQQSR FYDISALRVDSWAIVEKVLVHGDI*
Coding	>Pro_DTO377G3_2\|g5567.t1 ATGACCACTCTGAAATACCCCATGTCTATCCAAGGAATTATCCTCTCAAAATTCTGGTTCGGCTTCGATCTAGAT GACACGCTCCACGAATTCCGACGGGCCTCTGCCAATGCCTCGGTCCGCGTCTTCGAAACGATTCACGCCTCAAAC AACAAGACCAGCGTTGATACTCTCAAGAATACATACCAAGATATCCTGCGCAATACAACCGCAAACGCCTTCACA GATGGGAGGACTTCAAGCGAGTATCGGCGCGAACGGTTCGGGCGTCTTCTCCAGACGCACGGGCTCACTGATGAC TCTTTCCTGAGTCGTCTGTTAGAGGTATATCGAGACTCTCTACGCGAAAACTTGACTCTCAAGCCGGGTGGATTG CATCTTTTGCAAACTTTGCGAGAACTGGGAAAGAAAATCATTGTCATTACTGAGGGTCCGGCGGATGCGCAGGAG TGGACAGTCCAGGAACTCGGGATACGGCCTTACATTGATGTGCTTGTGACGACGAACGAGGTCGGGAAGTCTAAG ATTGATGGGCTGTTTGGTGCCGTGCTGGAGAAATATGGTATCGCCGCTGAAGATATTGTATACTTCGGTGATAAT GCGATTCGCGATGTTCAGGCTGCGCGGCAGGAAGGGATCCTGGCTGTTCTTTATGATGAAAAGCAGCAGTCTCGT TTCTACGATATCAGTGCATTACGAGTGGATTCGTGGGCTATTGTAGAAAAAGTACTCGTCCATGGAGACATATAG
Transcript	>Pro_DTO377G3_2\|g5567.t1 ATGACCACTCTGAAATACCCCATGTCTATCCAAGGAATTATCCTCTCAAAATTCTGGTTCGGCTTCGATCTAGAT GACACGCTCCACGAATTCCGACGGGCCTCTGCCAATGCCTCGGTCCGCGTCTTCGAAACGATTCACGCCTCAAAC AACAAGACCAGCGTTGATACTCTCAAGAATACATACCAAGATATCCTGCGCAATACAACCGCAAACGCCTTCACA GATGGGAGGACTTCAAGCGAGTATCGGCGCGAACGGTTCGGGCGTCTTCTCCAGACGCACGGGCTCACTGATGAC TCTTTCCTGAGTCGTCTGTTAGAGGTATATCGAGACTCTCTACGCGAAAACTTGACTCTCAAGCCGGGTGGATTG CATCTTTTGCAAACTTTGCGAGAACTGGGAAAGAAAATCATTGTCATTACTGAGGGTCCGGCGGATGCGCAGGAG TGGACAGTCCAGGAACTCGGGATACGGCCTTACATTGATGTGCTTGTGACGACGAACGAGGTCGGGAAGTCTAAG ATTGATGGGCTGTTTGGTGCCGTGCTGGAGAAATATGGTATCGCCGCTGAAGATATTGTATACTTCGGTGATAAT GCGATTCGCGATGTTCAGGCTGCGCGGCAGGAAGGGATCCTGGCTGTTCTTTATGATGAAAAGCAGCAGTCTCGT TTCTACGATATCAGTGCATTACGAGTGGATTCGTGGGCTATTGTAGAAAAAGTACTCGTCCATGGAGACATATAG
Gene	>Pro_DTO377G3_2\|g5567.t1 ATGACCACTCTGAAATACCCCATGTCTATCCAAGGAATTATCCTCTCAAAATTCTGGTTCGGCTTCGATCTAGAT GACACGCTCCACGAATTCCGACGGGCCTCTGCCAATGCCTCGGTCCGCGTCTTCGAAACGATTCACGCCTCAAAC AACAAGACCAGCGTTGATACTCTCAAGAATACATACCAAGATATCCTGCGCAATACAACCGCAAACGCCTTCACA GATGGGAGGACTTCAAGCGAGTATCGGCGCGAACGGTTCGGGCGTCTTCTCCAGACGCACGGGCTCACTGATGAC TCTTTCCTGAGTCGTCTGTTAGAGGTATATCGAGACTCTCTACGCGAAAACTTGACTCTCAAGCCGGGTGGATTG CATCTTTTGCAAACTTTGCGAGAACTGGGAAAGAAAATCATTGTCATTACTGAGGGTCCGGCGGATGCGCAGGAG TGGACAGTCCAGGAACTCGGGATACGGCCTTACATTGATGTGCTTGTGACGACGAACGAGGTCGGGAAGTCTAAG ATTGATGGGCTGTTTGGTGCCGTGCTGGAGAAATATGGTATCGCCGCTGAAGATATTGTATACTTCGGTGATAAT GCGATTCGCGATGTTCAGGCTGCGCGGCAGGAAGGGATCCTGGCTGTTCTTTATGATGAAAAGCAGCAGTCTCGT TTCTACGATATCAGTGCATTACGAGTGGATTCGTGGGCTATTGTAGAAAAAGTACTCGTCCATGGAGACATATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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