Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5548.t1
Gene name
Locationscaffold_13:408774..410122
Strand-
Gene length (bp)1348
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 61 80 19
3 141 163 22
4 190 212 22
5 222 244 22
6 257 279 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5548.t1
MKLPPAAILDSWPTPNYIDPPTRGHGVLIVNVVCLTLASLVVSLRLYTRVWITCSAGIDDALIVIGLVFGIAMAI
VTSIATEHWDMNRHIWDIKLLELEAIQKLNLSFQIMFSMSSCFTKISLLWFCRRLIGKGHFALYNLAFIFAIVFV
GVASLLFTIISIFQCSPIRAYWQLNPTESYHCMNDGAIVFSASVINIFTDFLVTALPMPLIWSLKLPARQRLAVI
SIFALGSIVNVAGSVRTVYVWKSMVTGYDATWLGWPVLIAAAVEISLGLICSSAPALRPLIAAFLPRLLSSNHNT
TSYNQRSRTHRHWYSTARSRASRLVADGHHQPSYSSDRFEIIRTVEMESWVESRLPSHEKMGHGYDITSDTGRAV
TPADSIEMKSGMVYASPTSAASSSASGRSETFDGRQLR*
Coding >Pro_DTO377G3_2|g5548.t1
ATGAAGCTCCCTCCAGCTGCCATCCTGGACTCATGGCCCACCCCAAACTATATCGACCCGCCCACGCGCGGCCAC
GGCGTCCTCATCGTGAACGTCGTCTGTCTCACCCTGGCCTCCCTGGTCGTCTCCCTCCGTCTATACACCAGGGTA
TGGATCACATGCAGCGCCGGCATCGATGATGCACTCATTGTCATCGGTCTGGTCTTCGGGATCGCAATGGCCATC
GTCACTTCTATCGCCACGGAACATTGGGACATGAACCGCCATATCTGGGATATTAAATTGCTGGAGCTCGAAGCT
ATTCAGAAACTAAATCTCTCCTTCCAAATCATGTTCTCGATGTCGTCGTGCTTCACCAAGATCTCTCTGTTGTGG
TTCTGTCGACGACTCATCGGGAAGGGCCACTTTGCGCTGTATAACTTGGCGTTTATTTTCGCCATTGTCTTTGTT
GGCGTGGCGAGTTTGCTGTTCACTATTATCAGTATCTTCCAATGCTCACCTATCCGCGCATACTGGCAACTTAAC
CCTACCGAGTCATACCATTGCATGAATGACGGCGCGATTGTTTTCTCCGCCAGTGTTATCAACATCTTCACCGAT
TTCCTAGTCACGGCTTTACCAATGCCGTTGATCTGGAGTCTGAAACTCCCTGCTCGCCAACGACTCGCCGTTATC
TCCATCTTCGCCCTCGGCTCCATAGTTAACGTAGCCGGCTCCGTGCGAACCGTATACGTGTGGAAGAGTATGGTG
ACTGGCTACGACGCGACCTGGCTTGGATGGCCAGTGCTGATCGCCGCGGCAGTAGAAATCAGCCTGGGATTGATC
TGCTCTTCAGCCCCAGCACTCCGCCCCCTCATTGCAGCCTTCCTCCCCCGCCTCCTCAGCTCCAACCACAACACC
ACCTCCTACAACCAGCGGTCTCGCACCCACAGACACTGGTACTCAACCGCCCGCTCCCGAGCATCCCGTCTCGTC
GCCGACGGCCACCACCAACCCAGTTACAGCAGCGACCGATTCGAAATCATCCGCACCGTCGAGATGGAGAGCTGG
GTTGAGTCCCGACTCCCGAGCCACGAGAAGATGGGCCACGGTTATGATATCACATCCGATACCGGCCGCGCCGTC
ACCCCTGCGGATAGCATTGAGATGAAGAGCGGCATGGTCTATGCCTCTCCGACGAGTGCTGCCTCCTCCTCTGCG
TCAGGACGGAGCGAGACATTCGATGGTCGGCAGCTGCGTTAA
Transcript >Pro_DTO377G3_2|g5548.t1
ATGAAGCTCCCTCCAGCTGCCATCCTGGACTCATGGCCCACCCCAAACTATATCGACCCGCCCACGCGCGGCCAC
GGCGTCCTCATCGTGAACGTCGTCTGTCTCACCCTGGCCTCCCTGGTCGTCTCCCTCCGTCTATACACCAGGGTA
TGGATCACATGCAGCGCCGGCATCGATGATGCACTCATTGTCATCGGTCTGGTCTTCGGGATCGCAATGGCCATC
GTCACTTCTATCGCCACGGAACATTGGGACATGAACCGCCATATCTGGGATATTAAATTGCTGGAGCTCGAAGCT
ATTCAGAAACTAAATCTCTCCTTCCAAATCATGTTCTCGATGTCGTCGTGCTTCACCAAGATCTCTCTGTTGTGG
TTCTGTCGACGACTCATCGGGAAGGGCCACTTTGCGCTGTATAACTTGGCGTTTATTTTCGCCATTGTCTTTGTT
GGCGTGGCGAGTTTGCTGTTCACTATTATCAGTATCTTCCAATGCTCACCTATCCGCGCATACTGGCAACTTAAC
CCTACCGAGTCATACCATTGCATGAATGACGGCGCGATTGTTTTCTCCGCCAGTGTTATCAACATCTTCACCGAT
TTCCTAGTCACGGCTTTACCAATGCCGTTGATCTGGAGTCTGAAACTCCCTGCTCGCCAACGACTCGCCGTTATC
TCCATCTTCGCCCTCGGCTCCATAGTTAACGTAGCCGGCTCCGTGCGAACCGTATACGTGTGGAAGAGTATGGTG
ACTGGCTACGACGCGACCTGGCTTGGATGGCCAGTGCTGATCGCCGCGGCAGTAGAAATCAGCCTGGGATTGATC
TGCTCTTCAGCCCCAGCACTCCGCCCCCTCATTGCAGCCTTCCTCCCCCGCCTCCTCAGCTCCAACCACAACACC
ACCTCCTACAACCAGCGGTCTCGCACCCACAGACACTGGTACTCAACCGCCCGCTCCCGAGCATCCCGTCTCGTC
GCCGACGGCCACCACCAACCCAGTTACAGCAGCGACCGATTCGAAATCATCCGCACCGTCGAGATGGAGAGCTGG
GTTGAGTCCCGACTCCCGAGCCACGAGAAGATGGGCCACGGTTATGATATCACATCCGATACCGGCCGCGCCGTC
ACCCCTGCGGATAGCATTGAGATGAAGAGCGGCATGGTCTATGCCTCTCCGACGAGTGCTGCCTCCTCCTCTGCG
TCAGGACGGAGCGAGACATTCGATGGTCGGCAGCTGCGTTAA
Gene >Pro_DTO377G3_2|g5548.t1
ATGAAGCTCCCTCCAGCTGCCATCCTGGACTCATGGCCCACCCCAAACTATATCGACCCGCCCACGCGCGGCCAC
GGCGTCCTCATCGTGAACGTCGTCTGTCTCACCCTGGCCTCCCTGGTCGTCTCCCTCCGTCTATACACCAGGGTA
TGGATCACATGCAGCGCCGGCATCGATGATGCACTCATTGTCATCGGTCTGGTCTTCGGGATCGCAATGGCCATC
GTCACTTCTATCGCCACGGAACATTGGGACATGAACCGCCATATCTGGGATATTAAATTGCTGGAGCTCGAAGCT
ATTCAGAAACTAAATCTCTCCTTCCAAATCATGTTCTCGATGTCGTCGTGCTTCACCAAGATCTCTCTGTTGTGG
TTCTGTCGACGACTCATCGGGAAGGGCCACTTTGCGCTGTATAACTTGGCGTTTATTTTCGCCATTGTCTTTGTT
GGCGTGGCGAGTTTGCTGTTCACTATTATCAGTATCTTCCAATGCTCGTGCGTCGTCTGCTGTCGTGGTGATCGA
GAATCGTTGCTAATGTTTCATACAGACCTATCCGCGCATACTGGCAACTTAACCCTACCGAGTCATACCATTGCA
TGAATGACGGCGCGATTGTTTTCTCCGCCAGTGTTATCAACATCTTCACCGATTTCCTAGTCACGGCTTTACCAA
TGCCGTTGATCTGGAGTCTGAAACTCCCTGCTCGCCAACGACTCGCCGTTATCTCCATCTTCGCCCTCGGCTCCA
TAGTTAACGTAGCCGGCTCCGTGCGAACCGTATACGTGTGGAAGAGTATGGTGACTGGCTACGACGCGACCTGGC
TTGGATGGCCAGTGCTGATCGCCGCGGCAGTAGAAATCAGCCTGGGATTGGTAAGACCAAAGTCGCGCTACCCAT
GCTCATACTCAACGCTAACAATCACCAGATCTGCTCTTCAGCCCCAGCACTCCGCCCCCTCATTGCAGCCTTCCT
CCCCCGCCTCCTCAGCTCCAACCACAACACCACCTCCTACAACCAGCGGTCTCGCACCCACAGACACTGGTACTC
AACCGCCCGCTCCCGAGCATCCCGTCTCGTCGCCGACGGCCACCACCAACCCAGTTACAGCAGCGACCGATTCGA
AATCATCCGCACCGTCGAGATGGAGAGCTGGGTTGAGTCCCGACTCCCGAGCCACGAGAAGATGGGCCACGGTTA
TGATATCACATCCGATACCGGCCGCGCCGTCACCCCTGCGGATAGCATTGAGATGAAGAGCGGCATGGTCTATGC
CTCTCCGACGAGTGCTGCCTCCTCCTCTGCGTCAGGACGGAGCGAGACATTCGATGGTCGGCAGCTGCGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail