Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5540.t1
Gene name
Locationscaffold_13:387463..389089
Strand-
Gene length (bp)1626
Transcript length (bp)1107
Coding sequence length (bp)1107
Protein length (aa) 369

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16897 MMR_HSR1_Xtn C-terminal region of MMR_HSR1 domain 2.4E-34 187 293
PF01926 MMR_HSR1 50S ribosome-binding GTPase 9.7E-20 66 159
PF02824 TGS TGS domain 3.7E-19 294 366
PF02421 FeoB_N Ferrous iron transport protein B 4.7E-12 66 155

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0097367 carbohydrate derivative binding No
GO:0032549 ribonucleoside binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0001883 purine nucleoside binding No
GO:0043168 anion binding No
GO:0001882 nucleoside binding No
GO:1901265 nucleoside phosphate binding No
GO:0017076 purine nucleotide binding No
GO:0036094 small molecule binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0032550 purine ribonucleoside binding No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0019001 guanyl nucleotide binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5540.t1
MVNITEKIKEIEDEMRRTQKNKATEHHLGLLKGKLARLRAQLLEPVGGAGGGPGAGFDVSKSGDARVALVGFPSV
GKSTFLSKITKTKSEAASYSFTTLTAIPGVLEYGGAEIQILDLPGIIEGASEGKGRGRQVISAAKTSDLILMILD
ATKRAEQRALLEAELDAVGIRLNKEPPNIYLKIKKAGGMKISFATPPKHLDEKLVYNVLRDYKILNCEVLVRDEN
ATIDDFIDVIMKDHRKYIRCLYVYNKVDSIGLEFLDALAREPHTAVMSCELDLGVQDVVERIWKELRLMRLYTKR
KGEEPKFDEALIVRKDSTIEDVCDQIHRTIKDTFKYALVWGASARHVPQRVGLGHLVADEDVVSIVAK*
Coding >Pro_DTO377G3_2|g5540.t1
ATGGTGAACATCACGGAAAAGATCAAGGAGATCGAGGATGAGATGCGTCGAACGCAGAAGAACAAGGCAACAGAA
CACCATTTGGGTCTACTGAAAGGAAAACTTGCCCGGCTAAGAGCCCAGCTCTTGGAGCCAGTGGGAGGTGCTGGC
GGTGGCCCCGGTGCGGGATTTGATGTCAGCAAGAGCGGCGATGCACGAGTGGCTCTTGTTGGCTTCCCCTCTGTC
GGAAAGTCTACATTCCTGTCTAAAATCACCAAGACCAAGAGTGAGGCTGCATCCTACTCTTTCACCACGCTGACG
GCTATTCCCGGAGTGCTGGAGTATGGTGGCGCTGAGATTCAGATCTTGGATTTGCCAGGTATTATCGAAGGTGCC
TCCGAGGGCAAAGGCCGTGGTCGGCAGGTCATTTCGGCCGCAAAGACAAGTGATTTGATCTTGATGATTTTGGAC
GCCACAAAGCGTGCCGAACAGCGAGCCTTGCTCGAGGCCGAGCTGGATGCCGTGGGCATTCGGTTGAACAAGGAG
CCCCCTAATATCTACTTGAAAATCAAGAAGGCCGGTGGCATGAAGATCTCTTTTGCTACGCCCCCAAAGCATTTG
GATGAAAAGTTGGTTTACAACGTGCTCCGGGATTACAAAATTCTCAACTGCGAGGTGCTCGTGCGAGATGAGAAT
GCCACGATCGACGACTTTATCGATGTGATTATGAAGGACCACCGGAAGTACATCCGCTGTCTTTACGTTTACAAC
AAGGTCGACAGCATCGGCCTCGAGTTCCTTGATGCCCTTGCCCGCGAACCTCACACAGCCGTCATGAGTTGCGAA
CTTGACCTCGGCGTGCAAGACGTTGTCGAACGCATCTGGAAGGAACTGAGACTAATGCGGCTTTACACAAAACGA
AAGGGAGAGGAACCTAAATTCGATGAGGCGCTCATCGTACGAAAGGACTCCACCATTGAGGATGTTTGTGACCAG
ATCCATCGCACAATTAAGGACACATTTAAGTATGCATTGGTGTGGGGAGCGAGCGCGAGACATGTTCCGCAGCGG
GTAGGATTGGGACATTTGGTTGCTGATGAGGATGTGGTATCTATAGTGGCTAAGTAG
Transcript >Pro_DTO377G3_2|g5540.t1
ATGGTGAACATCACGGAAAAGATCAAGGAGATCGAGGATGAGATGCGTCGAACGCAGAAGAACAAGGCAACAGAA
CACCATTTGGGTCTACTGAAAGGAAAACTTGCCCGGCTAAGAGCCCAGCTCTTGGAGCCAGTGGGAGGTGCTGGC
GGTGGCCCCGGTGCGGGATTTGATGTCAGCAAGAGCGGCGATGCACGAGTGGCTCTTGTTGGCTTCCCCTCTGTC
GGAAAGTCTACATTCCTGTCTAAAATCACCAAGACCAAGAGTGAGGCTGCATCCTACTCTTTCACCACGCTGACG
GCTATTCCCGGAGTGCTGGAGTATGGTGGCGCTGAGATTCAGATCTTGGATTTGCCAGGTATTATCGAAGGTGCC
TCCGAGGGCAAAGGCCGTGGTCGGCAGGTCATTTCGGCCGCAAAGACAAGTGATTTGATCTTGATGATTTTGGAC
GCCACAAAGCGTGCCGAACAGCGAGCCTTGCTCGAGGCCGAGCTGGATGCCGTGGGCATTCGGTTGAACAAGGAG
CCCCCTAATATCTACTTGAAAATCAAGAAGGCCGGTGGCATGAAGATCTCTTTTGCTACGCCCCCAAAGCATTTG
GATGAAAAGTTGGTTTACAACGTGCTCCGGGATTACAAAATTCTCAACTGCGAGGTGCTCGTGCGAGATGAGAAT
GCCACGATCGACGACTTTATCGATGTGATTATGAAGGACCACCGGAAGTACATCCGCTGTCTTTACGTTTACAAC
AAGGTCGACAGCATCGGCCTCGAGTTCCTTGATGCCCTTGCCCGCGAACCTCACACAGCCGTCATGAGTTGCGAA
CTTGACCTCGGCGTGCAAGACGTTGTCGAACGCATCTGGAAGGAACTGAGACTAATGCGGCTTTACACAAAACGA
AAGGGAGAGGAACCTAAATTCGATGAGGCGCTCATCGTACGAAAGGACTCCACCATTGAGGATGTTTGTGACCAG
ATCCATCGCACAATTAAGGACACATTTAAGTATGCATTGGTGTGGGGAGCGAGCGCGAGACATGTTCCGCAGCGG
GTAGGATTGGGACATTTGGTTGCTGATGAGGATGTGGTATCTATAGTGGCTAAGTAG
Gene >Pro_DTO377G3_2|g5540.t1
ATGGTGAACATCACGGAAAAGATCAAGGAGTCAGTTTCTTGTTAATTGCTGGATGGCCTAATTTACTGATCTTTT
ACAGGATCGAGGATGAGATGCGTCGAACGCAGAGTAAGTGTTCTTATCTTCAGACTTATATATCACCCCGCTAAT
GACCCACAGAGAACAAGGCAACAGGTAAGATATCATTTTGATCAGGGGAGGATATGACCTAATTTCCAAATCTCC
ATATCAGAACACCATTTGGGTCTACTGAAAGGGTATAGTCTGAATTCTCTAACTTCAATTTCAAATATAAACTAA
CAATCTTTCCAGAAAACTTGCCCGGCTAAGAGCCCAGCTCTTGGAGCCAGTGGGAGGTGCTGGCGGTGGCCCCGG
TGCGGGATTTGATGTCAGCAAGAGCGGCGATGCACGAGTGGCTCTTGTTGGCTTCCCCTCTGTCGGAAAGTCTAC
ATTCCTGTCTAAAATCACCAAGACCAAGAGTGAGGCTGCATCCTACTCTTTCACCACGCTGACGGCTATTCCCGG
AGTGCTGGAGTATGGTGGCGCTGAGATTCAGATCTTGGATTTGCCAGGTATTATCGAAGGTGCCTCCGAGGGCAA
AGGCCGTGGTCGGCAGGTCATTTCGGCCGCAAAGGTGAGCGGGCTAACTTTCTTAATAGGAGAGAGTACAGAAAC
ACTGACAAAATTCCTGCTTCTAGACAAGTGATTTGATCTTGATGATTTTGGACGCCACAAAGCGTGCCGAACAGC
GAGCCTTGCTCGAGGCCGAGCTGGATGCCGTGGGCATTCGGTTGAACAAGGAGCCCCCGTATGTTATACCGTATC
CGAAGTTTTGCGCAGACTGAAATACTGATACCATCCTAGTAATATCTACTTGAAAATCAAGAAGGCCGGTGGCAT
GAAGATCTCTTTTGCTACGCCCCCAAAGCATTTGGATGAAAAGTTGGTTTACAACGTGCTCCGGGATTACAAAAT
TCTCAACTGCGAGGTGCTCGTGCGAGATGAGAATGGTACGTGATGCTTTAATACAAACAGCCAGGCCCAAACACT
AATTGCGGCTCCGTTATAGCCACGATCGACGACTTTATCGATGTGATTATGAAGGACCACCGGAAGTACATCCGC
TGGTAAGATTGACACTAATCATGATTGATATCCAACTGTCAAACGCTAATATTTCTCCTTTTGTGCCAGTCTTTA
CGTTTACAACAAGGTCGACAGCATCGGCCTCGAGTTCCTTGATGCCCTTGCCCGCGAACCTCACACAGCCGTCAT
GAGTTGCGAACTTGACCTCGGCGTGCAAGACGTTGTCGAACGCATCTGGAAGGAACTGAGACTAATGCGGCTTTA
CACAAAACGGTATGGTATATCCTTGACTTTAGGTTCATTGACATGGCTGATGATTATCGTATCTTTAGAAAGGGA
GAGGAACCTAAATTCGATGAGGCGCTCATCGTACGAAAGGACTCCACCATTGAGGATGTTTGTGACCAGATCCAT
CGCACAATTAAGGACACATTTAAGTATGCATTGGTGTGGGGAGCGAGCGCGAGACATGTTCCGCAGCGGGTAGGA
TTGGGACATTTGGTTGCTGATGAGGATGTGGTATCTATAGTGGCTAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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