Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5539.t1
Gene name
Locationscaffold_13:385895..387263
Strand+
Gene length (bp)1368
Transcript length (bp)1368
Coding sequence length (bp)1368
Protein length (aa) 456

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00117 GATase Glutamine amidotransferase class-I 7.1E-46 221 396
PF00988 CPSase_sm_chain Carbamoyl-phosphate synthase small chain, CPSase domain 3.1E-45 41 176

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5539.t1
MISNLFKAMPARASAFASMSRTSGQARFMATVRRAAMEPATFTIRDGPMFSGKSFGARSNISGEAVFTTSLVGYP
ESLTDPSYRGQILVFTQPLIGNYGVPSAEKDPNGLLKYFESPNLQAAGVVVADVAEQYSHWTAVQSLGEWCAREG
VPAISGVDTRAIVTYLREQGSSLARITVGEEYDANEDEAFTDPEQIHLVRQVSTKQPFHVAAADPHSHVAVIDCG
VKENILRSLVGRGSSVTVLPFDYPIHKVAHHFDGVFISNGPGDPTHCQDTVYHLKRLMETSQVPIFGICLGHQLL
ALAAGASTIKLKYGNRAHNIPALDLSTGRCHITSQNHGYAVDASTLPSDWKPYFINLNDQSNEGMIHKSRPIFST
QFHPEAKGGPLDSSYLFDIYLDSVLKYKNSQTGLYPQRDSRPSPLLVDLLAKERVGVQPTIGQQNVVAAAAASAA
IAAAA*
Coding >Pro_DTO377G3_2|g5539.t1
ATGATCTCCAACCTCTTCAAGGCAATGCCTGCCCGGGCTTCTGCCTTCGCCTCCATGAGCCGAACCTCTGGTCAG
GCCCGCTTCATGGCTACTGTGCGCCGTGCCGCTATGGAGCCTGCTACCTTCACTATCCGTGATGGTCCCATGTTC
TCCGGCAAGTCTTTCGGTGCCCGCTCCAACATCTCTGGCGAAGCCGTCTTCACTACATCCCTTGTTGGATACCCC
GAGTCCTTGACCGATCCCTCATACCGTGGTCAGATCCTAGTTTTCACCCAGCCTCTGATTGGCAACTACGGAGTT
CCCTCCGCCGAGAAGGATCCCAATGGACTTTTGAAATACTTCGAGTCTCCCAATCTCCAGGCAGCTGGTGTTGTT
GTTGCCGATGTCGCCGAGCAATACAGTCACTGGACTGCTGTCCAGAGTCTGGGCGAGTGGTGTGCCCGTGAAGGT
GTTCCTGCCATCTCCGGTGTCGATACTCGTGCCATTGTCACCTACCTGCGTGAGCAAGGCTCTTCTCTGGCCCGT
ATCACCGTCGGCGAAGAATACGACGCCAACGAGGATGAGGCTTTCACTGACCCTGAGCAAATCCACTTGGTGCGC
CAGGTCAGCACCAAGCAGCCTTTCCATGTTGCCGCTGCTGATCCCCACTCCCACGTTGCTGTCATCGACTGTGGT
GTTAAGGAGAACATTCTCCGCAGCTTGGTCGGTCGTGGCTCCAGCGTCACTGTCCTGCCCTTCGACTACCCCATC
CACAAGGTCGCCCACCACTTCGATGGTGTCTTCATCTCCAACGGCCCTGGTGACCCAACCCACTGCCAGGACACC
GTCTACCACCTGAAGCGTCTGATGGAGACCTCCCAGGTCCCCATTTTCGGTATCTGCCTGGGCCACCAGCTCCTC
GCTCTGGCCGCCGGTGCCAGCACCATCAAGTTGAAGTACGGAAACCGGGCTCACAACATTCCCGCTCTTGACCTT
AGCACTGGTCGCTGCCACATCACCAGCCAGAACCACGGTTACGCCGTTGATGCTTCGACTCTACCATCGGACTGG
AAGCCGTACTTCATCAACCTGAACGACCAGAGCAACGAAGGCATGATCCACAAGTCTCGTCCCATCTTCAGCACC
CAGTTCCACCCCGAGGCCAAGGGCGGTCCTCTTGACTCATCCTACCTCTTCGATATCTACCTGGACTCCGTGCTG
AAGTACAAGAACAGCCAGACTGGTCTCTACCCTCAGCGTGACAGCCGCCCCAGCCCTCTGCTGGTCGACCTGCTT
GCCAAGGAGCGCGTGGGTGTTCAGCCCACCATTGGCCAGCAGAACGTGGTAGCCGCTGCCGCTGCTTCTGCTGCC
ATTGCCGCTGCTGCTTAA
Transcript >Pro_DTO377G3_2|g5539.t1
ATGATCTCCAACCTCTTCAAGGCAATGCCTGCCCGGGCTTCTGCCTTCGCCTCCATGAGCCGAACCTCTGGTCAG
GCCCGCTTCATGGCTACTGTGCGCCGTGCCGCTATGGAGCCTGCTACCTTCACTATCCGTGATGGTCCCATGTTC
TCCGGCAAGTCTTTCGGTGCCCGCTCCAACATCTCTGGCGAAGCCGTCTTCACTACATCCCTTGTTGGATACCCC
GAGTCCTTGACCGATCCCTCATACCGTGGTCAGATCCTAGTTTTCACCCAGCCTCTGATTGGCAACTACGGAGTT
CCCTCCGCCGAGAAGGATCCCAATGGACTTTTGAAATACTTCGAGTCTCCCAATCTCCAGGCAGCTGGTGTTGTT
GTTGCCGATGTCGCCGAGCAATACAGTCACTGGACTGCTGTCCAGAGTCTGGGCGAGTGGTGTGCCCGTGAAGGT
GTTCCTGCCATCTCCGGTGTCGATACTCGTGCCATTGTCACCTACCTGCGTGAGCAAGGCTCTTCTCTGGCCCGT
ATCACCGTCGGCGAAGAATACGACGCCAACGAGGATGAGGCTTTCACTGACCCTGAGCAAATCCACTTGGTGCGC
CAGGTCAGCACCAAGCAGCCTTTCCATGTTGCCGCTGCTGATCCCCACTCCCACGTTGCTGTCATCGACTGTGGT
GTTAAGGAGAACATTCTCCGCAGCTTGGTCGGTCGTGGCTCCAGCGTCACTGTCCTGCCCTTCGACTACCCCATC
CACAAGGTCGCCCACCACTTCGATGGTGTCTTCATCTCCAACGGCCCTGGTGACCCAACCCACTGCCAGGACACC
GTCTACCACCTGAAGCGTCTGATGGAGACCTCCCAGGTCCCCATTTTCGGTATCTGCCTGGGCCACCAGCTCCTC
GCTCTGGCCGCCGGTGCCAGCACCATCAAGTTGAAGTACGGAAACCGGGCTCACAACATTCCCGCTCTTGACCTT
AGCACTGGTCGCTGCCACATCACCAGCCAGAACCACGGTTACGCCGTTGATGCTTCGACTCTACCATCGGACTGG
AAGCCGTACTTCATCAACCTGAACGACCAGAGCAACGAAGGCATGATCCACAAGTCTCGTCCCATCTTCAGCACC
CAGTTCCACCCCGAGGCCAAGGGCGGTCCTCTTGACTCATCCTACCTCTTCGATATCTACCTGGACTCCGTGCTG
AAGTACAAGAACAGCCAGACTGGTCTCTACCCTCAGCGTGACAGCCGCCCCAGCCCTCTGCTGGTCGACCTGCTT
GCCAAGGAGCGCGTGGGTGTTCAGCCCACCATTGGCCAGCAGAACGTGGTAGCCGCTGCCGCTGCTTCTGCTGCC
ATTGCCGCTGCTGCTTAA
Gene >Pro_DTO377G3_2|g5539.t1
ATGATCTCCAACCTCTTCAAGGCAATGCCTGCCCGGGCTTCTGCCTTCGCCTCCATGAGCCGAACCTCTGGTCAG
GCCCGCTTCATGGCTACTGTGCGCCGTGCCGCTATGGAGCCTGCTACCTTCACTATCCGTGATGGTCCCATGTTC
TCCGGCAAGTCTTTCGGTGCCCGCTCCAACATCTCTGGCGAAGCCGTCTTCACTACATCCCTTGTTGGATACCCC
GAGTCCTTGACCGATCCCTCATACCGTGGTCAGATCCTAGTTTTCACCCAGCCTCTGATTGGCAACTACGGAGTT
CCCTCCGCCGAGAAGGATCCCAATGGACTTTTGAAATACTTCGAGTCTCCCAATCTCCAGGCAGCTGGTGTTGTT
GTTGCCGATGTCGCCGAGCAATACAGTCACTGGACTGCTGTCCAGAGTCTGGGCGAGTGGTGTGCCCGTGAAGGT
GTTCCTGCCATCTCCGGTGTCGATACTCGTGCCATTGTCACCTACCTGCGTGAGCAAGGCTCTTCTCTGGCCCGT
ATCACCGTCGGCGAAGAATACGACGCCAACGAGGATGAGGCTTTCACTGACCCTGAGCAAATCCACTTGGTGCGC
CAGGTCAGCACCAAGCAGCCTTTCCATGTTGCCGCTGCTGATCCCCACTCCCACGTTGCTGTCATCGACTGTGGT
GTTAAGGAGAACATTCTCCGCAGCTTGGTCGGTCGTGGCTCCAGCGTCACTGTCCTGCCCTTCGACTACCCCATC
CACAAGGTCGCCCACCACTTCGATGGTGTCTTCATCTCCAACGGCCCTGGTGACCCAACCCACTGCCAGGACACC
GTCTACCACCTGAAGCGTCTGATGGAGACCTCCCAGGTCCCCATTTTCGGTATCTGCCTGGGCCACCAGCTCCTC
GCTCTGGCCGCCGGTGCCAGCACCATCAAGTTGAAGTACGGAAACCGGGCTCACAACATTCCCGCTCTTGACCTT
AGCACTGGTCGCTGCCACATCACCAGCCAGAACCACGGTTACGCCGTTGATGCTTCGACTCTACCATCGGACTGG
AAGCCGTACTTCATCAACCTGAACGACCAGAGCAACGAAGGCATGATCCACAAGTCTCGTCCCATCTTCAGCACC
CAGTTCCACCCCGAGGCCAAGGGCGGTCCTCTTGACTCATCCTACCTCTTCGATATCTACCTGGACTCCGTGCTG
AAGTACAAGAACAGCCAGACTGGTCTCTACCCTCAGCGTGACAGCCGCCCCAGCCCTCTGCTGGTCGACCTGCTT
GCCAAGGAGCGCGTGGGTGTTCAGCCCACCATTGGCCAGCAGAACGTGGTAGCCGCTGCCGCTGCTTCTGCTGCC
ATTGCCGCTGCTGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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