Protein ID | Pro_DTO377G3_2|g5515.t1 |
Gene name | |
Location | scaffold_13:323898..326039 |
Strand | + |
Gene length (bp) | 2141 |
Transcript length (bp) | 1794 |
Coding sequence length (bp) | 1794 |
Protein length (aa) | 598 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09325 | Vps5 | Vps5 C terminal like | 4.4E-15 | 301 | 486 |
PF00787 | PX | PX domain | 1.9E-09 | 159 | 247 |
GO Term | Description | Terminal node |
---|---|---|
GO:0035091 | phosphatidylinositol binding | Yes |
GO:0008289 | lipid binding | No |
GO:0043168 | anion binding | No |
GO:0005488 | binding | No |
GO:0005543 | phospholipid binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5515.t1 MPARATPPCQRLYSLRRPSTKMDYSTISTDPDHPVGTSPWGSPHVERGAFPTSSNDIPSSPLPGQEQSADVGSSH NGEPQSPDLSAQLQSAQLGDPDYPEEPFSAHQPSNSQQQLSPTLAQFQTGARDTRPPAPAYRIQGKVTGLERTGK KDPILRFDIHTNIPKFRTTQYRDVRRTHSEFVKLADHLISANPEALVPAVPSPVTPAGAGTEEDEIRIKSAMQRW LNVVLSNEILIQDDEVVLFVESDFGYSPVLRMKQPATGVRRKMLKQFAPPPDDTPELQAARPIAKMFYLASMDTS HKVDRVVKARRGLGLAEADFGVKLGQMSVQETHPGLGAAYRKLGKIVQTVGDYHAVQATAEATTLGEPLSYHSSD AFIVKETLTNRHILLRDLLQAQQSARSKRAAADRLKVSSSVRPDKVDEAINALEEAQNHEDYLTKRTQRVTSNLL QEKRRWFDRTTQDLLSSLREYTLRQIEAERRTLATLESVRPDIRAIDASGGLSRLGRESHPAMRRPNMASSQGPK GDSWSGVPRRNDNIGRSMSGSFTAPSLPDDDDEESSNKGRNRASSQVGSIAEEDDDRLDARNAASRLATSTF* |
Coding | >Pro_DTO377G3_2|g5515.t1 ATGCCTGCACGAGCCACTCCCCCTTGTCAGCGATTATACTCCTTACGCCGACCTTCAACTAAGATGGACTACTCT ACCATCTCTACCGACCCGGATCATCCTGTCGGTACCTCGCCCTGGGGATCACCGCATGTTGAGCGAGGCGCCTTC CCCACTTCCAGCAATGACATCCCGTCGTCCCCTTTACCCGGCCAGGAGCAATCGGCGGACGTTGGTAGTAGTCAC AATGGAGAACCCCAATCTCCAGACCTCTCTGCGCAGCTGCAGAGCGCGCAATTAGGAGACCCGGACTATCCCGAG GAGCCATTCAGCGCGCACCAGCCTTCAAACAGCCAGCAACAACTATCTCCTACTCTCGCACAATTTCAGACCGGA GCACGAGACACACGGCCCCCCGCTCCCGCCTATAGAATCCAAGGAAAGGTCACTGGTCTGGAGAGGACGGGGAAG AAAGACCCAATCCTGCGTTTCGACATCCACACCAATATTCCCAAATTCCGCACGACCCAGTACCGTGATGTGCGT CGGACCCATTCCGAATTTGTCAAGCTCGCAGACCATCTAATTTCCGCCAACCCGGAAGCTCTGGTCCCTGCTGTG CCATCGCCAGTGACGCCGGCCGGCGCCGGCACCGAGGAGGATGAGATTCGCATCAAATCGGCGATGCAGAGATGG CTCAATGTTGTGCTAAGCAATGAAATTCTCATTCAAGACGACGAGGTTGTGCTTTTCGTGGAAAGCGACTTCGGC TATAGCCCCGTACTGCGGATGAAGCAGCCGGCAACGGGCGTGCGACGAAAGATGTTGAAGCAGTTTGCGCCGCCT CCAGATGACACACCCGAGTTGCAAGCTGCTCGCCCAATTGCGAAGATGTTTTACTTGGCATCAATGGATACGAGC CACAAGGTCGACCGAGTTGTCAAGGCCCGTCGTGGGCTTGGATTGGCTGAAGCCGATTTCGGCGTGAAGCTCGGT CAGATGAGCGTACAGGAGACTCATCCCGGCTTGGGCGCCGCTTACCGTAAACTTGGCAAGATTGTTCAGACAGTT GGCGACTACCACGCTGTTCAGGCCACCGCGGAGGCTACCACTCTCGGCGAACCGTTGAGTTACCACTCTTCAGAC GCCTTTATTGTGAAGGAAACCCTCACCAACCGCCATATTCTTCTGCGTGATCTACTCCAGGCCCAACAAAGTGCA CGGAGCAAACGTGCCGCAGCAGACCGCTTGAAGGTTAGCTCATCGGTGCGTCCGGACAAGGTAGATGAAGCGATC AACGCTCTTGAGGAGGCCCAAAACCATGAAGATTACTTGACCAAGCGGACCCAGCGTGTCACGTCAAACCTTCTC CAGGAGAAGCGCCGCTGGTTTGACCGCACCACCCAGGATCTTTTATCCAGCCTACGTGAGTACACTCTCCGCCAG ATCGAAGCTGAGCGCCGTACTCTGGCCACTTTGGAGAGTGTCCGACCCGACATTCGTGCCATTGACGCTTCCGGT GGTCTTAGCCGGCTGGGTCGCGAATCCCACCCAGCGATGCGCCGGCCAAACATGGCTTCGAGCCAGGGCCCTAAG GGTGATTCGTGGAGCGGTGTTCCTCGCCGCAATGACAACATTGGACGCAGCATGAGTGGCAGCTTTACTGCCCCC TCGCTCCCTGACGATGATGATGAGGAGAGCTCTAATAAAGGACGCAACCGAGCTTCCAGTCAGGTTGGGTCGATT GCGGAGGAAGACGATGACCGTCTTGATGCGCGAAATGCAGCCAGCAGATTGGCCACCAGCACGTTCTGA |
Transcript | >Pro_DTO377G3_2|g5515.t1 ATGCCTGCACGAGCCACTCCCCCTTGTCAGCGATTATACTCCTTACGCCGACCTTCAACTAAGATGGACTACTCT ACCATCTCTACCGACCCGGATCATCCTGTCGGTACCTCGCCCTGGGGATCACCGCATGTTGAGCGAGGCGCCTTC CCCACTTCCAGCAATGACATCCCGTCGTCCCCTTTACCCGGCCAGGAGCAATCGGCGGACGTTGGTAGTAGTCAC AATGGAGAACCCCAATCTCCAGACCTCTCTGCGCAGCTGCAGAGCGCGCAATTAGGAGACCCGGACTATCCCGAG GAGCCATTCAGCGCGCACCAGCCTTCAAACAGCCAGCAACAACTATCTCCTACTCTCGCACAATTTCAGACCGGA GCACGAGACACACGGCCCCCCGCTCCCGCCTATAGAATCCAAGGAAAGGTCACTGGTCTGGAGAGGACGGGGAAG AAAGACCCAATCCTGCGTTTCGACATCCACACCAATATTCCCAAATTCCGCACGACCCAGTACCGTGATGTGCGT CGGACCCATTCCGAATTTGTCAAGCTCGCAGACCATCTAATTTCCGCCAACCCGGAAGCTCTGGTCCCTGCTGTG CCATCGCCAGTGACGCCGGCCGGCGCCGGCACCGAGGAGGATGAGATTCGCATCAAATCGGCGATGCAGAGATGG CTCAATGTTGTGCTAAGCAATGAAATTCTCATTCAAGACGACGAGGTTGTGCTTTTCGTGGAAAGCGACTTCGGC TATAGCCCCGTACTGCGGATGAAGCAGCCGGCAACGGGCGTGCGACGAAAGATGTTGAAGCAGTTTGCGCCGCCT CCAGATGACACACCCGAGTTGCAAGCTGCTCGCCCAATTGCGAAGATGTTTTACTTGGCATCAATGGATACGAGC CACAAGGTCGACCGAGTTGTCAAGGCCCGTCGTGGGCTTGGATTGGCTGAAGCCGATTTCGGCGTGAAGCTCGGT CAGATGAGCGTACAGGAGACTCATCCCGGCTTGGGCGCCGCTTACCGTAAACTTGGCAAGATTGTTCAGACAGTT GGCGACTACCACGCTGTTCAGGCCACCGCGGAGGCTACCACTCTCGGCGAACCGTTGAGTTACCACTCTTCAGAC GCCTTTATTGTGAAGGAAACCCTCACCAACCGCCATATTCTTCTGCGTGATCTACTCCAGGCCCAACAAAGTGCA CGGAGCAAACGTGCCGCAGCAGACCGCTTGAAGGTTAGCTCATCGGTGCGTCCGGACAAGGTAGATGAAGCGATC AACGCTCTTGAGGAGGCCCAAAACCATGAAGATTACTTGACCAAGCGGACCCAGCGTGTCACGTCAAACCTTCTC CAGGAGAAGCGCCGCTGGTTTGACCGCACCACCCAGGATCTTTTATCCAGCCTACGTGAGTACACTCTCCGCCAG ATCGAAGCTGAGCGCCGTACTCTGGCCACTTTGGAGAGTGTCCGACCCGACATTCGTGCCATTGACGCTTCCGGT GGTCTTAGCCGGCTGGGTCGCGAATCCCACCCAGCGATGCGCCGGCCAAACATGGCTTCGAGCCAGGGCCCTAAG GGTGATTCGTGGAGCGGTGTTCCTCGCCGCAATGACAACATTGGACGCAGCATGAGTGGCAGCTTTACTGCCCCC TCGCTCCCTGACGATGATGATGAGGAGAGCTCTAATAAAGGACGCAACCGAGCTTCCAGTCAGGTTGGGTCGATT GCGGAGGAAGACGATGACCGTCTTGATGCGCGAAATGCAGCCAGCAGATTGGCCACCAGCACGTTCTGA |
Gene | >Pro_DTO377G3_2|g5515.t1 ATGCGTGACTTGACTCCGACACTACCTACCTCTCCTCAACTACTCAGATCCTTTTGCTCATACCCTTGCTGTTTA TTTGCTGTCTTTGTTATGCCAATTCAACGGGTCTCATCTATTCTCTCCGTTTGAAGCTGCACGAGGTAGGTCTTT GAGTGCCTGGAAGCTGACCATTACTGTGGGGGTCCGATCTTCAGCCGTTTAATACTGACGCCTGCCATGACCAGC CACTCCCCCTTGTCAGCGATTATACTCCTTACGCCGACCTTCAACTAAGATGGACTACTCTACCATCTCTACCGA CCCGGATCATCCTGTCGGTACCTCGCCCTGGGGATCACCGCATGTTGAGCGAGGCGCCTTCCCCACTTCCAGCAA TGACATCCCGTCGTCCCCTTTACCCGGCCAGGAGCAATCGGCGGACGTTGGTAGTAGTCACAATGGAGAACCCCA ATCTCCAGACCTCTCTGCGCAGCTGCAGAGCGCGCAATTAGGAGACCCGGACTATCCCGAGGAGCCATTCAGCGC GCACCAGCCTTCAAACAGCCAGCAACAACTATCTCCTACTCTCGCACAATTTCAGACCGGAGCACGAGACACACG GCCCCCCGCTCCCGCCTATAGAATCCAAGGAAAGGTCACTGGTCTGGAGAGGACGGGGAAGAAAGACCCAATCCT GCGTTTCGACATCCACGTAGGTCTGCCCCTGGGAGTATTTGCGCCTGTGCCATGGCTAATTCCCGATTTTTCTTT GAGATCAGACCAATATTCCCAAATTCCGCACGACCCAGTACCGTGATGTGCGTCGGACCCATTCCGAATTTGTCA AGCTCGCAGACCATCTAATTTCCGCCAACCCGGAAGCTCTGGTCCCTGCTGTGCCATCGCCAGTGACGCCGGCCG GCGCCGGCACCGAGGAGGATGAGATTCGCATCAAATCGGCGATGCAGAGATGGCTCAATGTTGTGCTAAGCAATG AAATTCTCATTCAAGACGACGAGGTTGTGCTTTTCGTGGAAAGCGACTTCGGCTATAGCCCCGTACTGCGGATGA AGCAGCCGGCAACGGGCGTGCGACGAAAGATGTTGAAGCAGTTTGCGCCGCCTCCAGATGACACACCCGAGTTGC AAGCTGCTCGCCCAATTGCGAAGATGTTTTACTTGGCATCAATGGATACGAGCCACAAGGTCGACCGAGTTGTCA AGGCCCGTCGTGGTACGTTATCGGAGTTTTAAACTGTTTTGGTCGCATATTTTGTTCCGATTAAAACTGACAATT TTTTAGGGCTTGGATTGGCTGAAGCCGATTTCGGCGTGAAGCTCGGTCAGATGAGCGTACAGGAGACTCATCCCG GCTTGGGCGCCGCTTACCGTAAACTTGGCAAGATTGTTCAGACAGTTGGCGACTACCACGCTGTTCAGGCCACCG CGGAGGCTACCACTCTCGGCGAACCGTTGAGTTACCACTCTTCAGACGCCTTTATTGTGAAGGAAACCCTCACCA ACCGCCATATTCTTCTGCGTGATCTACTCCAGGCCCAACAAAGTGCACGGAGCAAACGTGCCGCAGCAGACCGCT TGAAGGTTAGCTCATCGGTGCGTCCGGACAAGGTAGATGAAGCGATCAACGCTCTTGAGGAGGCCCAAAACCATG AAGATTACTTGACCAAGCGGACCCAGCGTGTCACGTCAAACCTTCTCCAGGAGAAGCGCCGCTGGTTTGACCGCA CCACCCAGGATCTTTTATCCAGCCTACGTGAGTACACTCTCCGCCAGATCGAAGCTGAGCGCCGTACTCTGGCCA CTTTGGAGAGTGTCCGACCCGACATTCGTGCCATTGACGCTTCCGGTGGTCTTAGCCGGCTGGGTCGCGAATCCC ACCCAGCGATGCGCCGGCCAAACATGGCTTCGAGCCAGGGCCCTAAGGGTGATTCGTGGAGCGGTGTTCCTCGCC GCAATGACAACATTGGACGCAGCATGAGTGGCAGCTTTACTGCCCCCTCGCTCCCTGACGATGATGATGAGGAGA GCTCTAATAAAGGACGCAACCGAGCTTCCAGTCAGGTTGGGTCGATTGCGGAGGAAGACGATGACCGTCTTGATG CGCGAAATGCAGCCAGCAGATTGGCCACCAGCACGTTCTGA |