Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5507.t1
Gene name
Locationscaffold_13:304166..305378
Strand-
Gene length (bp)1212
Transcript length (bp)1212
Coding sequence length (bp)1212
Protein length (aa) 404

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04371 PAD_porph Porphyromonas-type peptidyl-arginine deiminase 3.1E-98 40 400

GO

GO Term Description Terminal node
GO:0009446 putrescine biosynthetic process Yes
GO:0004668 protein-arginine deiminase activity Yes
GO:0097164 ammonium ion metabolic process No
GO:0009309 amine biosynthetic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009308 amine metabolic process No
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0009445 putrescine metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044106 cellular amine metabolic process No
GO:0009987 cellular process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0006576 cellular biogenic amine metabolic process No
GO:0044237 cellular metabolic process No
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0006595 polyamine metabolic process No
GO:0016787 hydrolase activity No
GO:0008150 biological_process No
GO:0006807 nitrogen compound metabolic process No
GO:0042401 cellular biogenic amine biosynthetic process No
GO:0003674 molecular_function No
GO:1901576 organic substance biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0009058 biosynthetic process No
GO:0006596 polyamine biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5507.t1
MKLFERFRKFLSNLYTTTRTWFQPSHISSNESKVQSSYIFPAESEPHEATIMGLPSRCSLPPDQFDAMCNELAQL
AAAITDFEPVRLYVRPEDIPLAESLVQTFVKDATKISIIPCPINHCWVRDTGPVYVRDKIGAFPNRRFAINFRFN
EWGGKKPEDDGICWGQRWPVMDKKALQENTNFARWVMEHDRKPGPVTQIETPIRAEGGGLVTDGEGTLLITESSI
VCDVRNPGMSKAEIETELRRLLGIEKVIWFPGRRNVDITDVHMDAEARFVRPGVIAYSKPHPIAIDLWQELSTEI
REILDRETDAKGRRLQIHTIEEPDPRGLVKSDHDELAASYVNFYFVNGGLIIPRFGDEERDQKALEMFQRLLPER
VIRQVYANAIPLTGGVLHCVTQQVPVMK*
Coding >Pro_DTO377G3_2|g5507.t1
ATGAAGCTATTCGAGCGATTCCGCAAATTTCTGTCGAATCTCTATACTACTACACGTACCTGGTTCCAACCCTCT
CACATCAGCAGTAATGAGAGCAAAGTTCAAAGCAGCTACATCTTCCCGGCAGAGTCGGAGCCTCATGAAGCGACA
ATCATGGGATTACCATCTCGATGTTCCCTACCCCCCGATCAGTTTGACGCCATGTGCAATGAATTAGCTCAACTA
GCGGCGGCGATCACTGACTTCGAACCGGTTCGGCTATACGTGAGGCCCGAAGACATCCCATTGGCCGAGTCCCTA
GTCCAGACTTTCGTGAAAGACGCAACAAAAATATCTATCATCCCCTGTCCAATCAACCACTGCTGGGTCCGCGAC
ACAGGCCCAGTCTACGTGCGCGACAAGATAGGCGCATTCCCGAATCGACGCTTCGCAATCAACTTCCGCTTCAAT
GAATGGGGCGGGAAGAAACCCGAAGACGACGGAATCTGCTGGGGTCAGCGATGGCCTGTGATGGACAAGAAGGCA
CTACAGGAAAACACCAATTTTGCGCGGTGGGTAATGGAGCACGATCGCAAGCCCGGCCCCGTTACGCAGATCGAG
ACTCCGATTCGCGCCGAGGGCGGCGGGCTCGTTACCGACGGCGAAGGAACGCTGCTTATCACGGAGAGTAGCATT
GTATGTGATGTGCGCAACCCGGGGATGTCCAAGGCCGAGATCGAGACGGAGTTGAGGCGGCTGCTCGGGATTGAA
AAGGTGATCTGGTTCCCAGGACGGCGCAATGTTGACATTACCGACGTGCATATGGATGCTGAGGCAAGATTCGTG
CGCCCTGGTGTCATCGCTTACTCAAAACCACATCCTATTGCGATTGACCTGTGGCAGGAGCTGTCTACGGAGATC
CGAGAGATTCTGGACCGCGAGACAGACGCTAAGGGTCGGCGCTTGCAGATCCACACCATTGAAGAGCCGGACCCA
CGAGGCTTGGTGAAATCCGATCACGACGAACTAGCGGCGAGTTATGTGAATTTCTATTTTGTTAATGGAGGCCTG
ATTATCCCCAGATTCGGTGACGAAGAAAGGGATCAAAAGGCGCTGGAAATGTTTCAGCGCTTGCTCCCTGAGCGG
GTGATTCGGCAGGTGTATGCCAACGCCATCCCCCTTACTGGTGGGGTGCTTCACTGCGTCACTCAGCAGGTTCCT
GTAATGAAGTGA
Transcript >Pro_DTO377G3_2|g5507.t1
ATGAAGCTATTCGAGCGATTCCGCAAATTTCTGTCGAATCTCTATACTACTACACGTACCTGGTTCCAACCCTCT
CACATCAGCAGTAATGAGAGCAAAGTTCAAAGCAGCTACATCTTCCCGGCAGAGTCGGAGCCTCATGAAGCGACA
ATCATGGGATTACCATCTCGATGTTCCCTACCCCCCGATCAGTTTGACGCCATGTGCAATGAATTAGCTCAACTA
GCGGCGGCGATCACTGACTTCGAACCGGTTCGGCTATACGTGAGGCCCGAAGACATCCCATTGGCCGAGTCCCTA
GTCCAGACTTTCGTGAAAGACGCAACAAAAATATCTATCATCCCCTGTCCAATCAACCACTGCTGGGTCCGCGAC
ACAGGCCCAGTCTACGTGCGCGACAAGATAGGCGCATTCCCGAATCGACGCTTCGCAATCAACTTCCGCTTCAAT
GAATGGGGCGGGAAGAAACCCGAAGACGACGGAATCTGCTGGGGTCAGCGATGGCCTGTGATGGACAAGAAGGCA
CTACAGGAAAACACCAATTTTGCGCGGTGGGTAATGGAGCACGATCGCAAGCCCGGCCCCGTTACGCAGATCGAG
ACTCCGATTCGCGCCGAGGGCGGCGGGCTCGTTACCGACGGCGAAGGAACGCTGCTTATCACGGAGAGTAGCATT
GTATGTGATGTGCGCAACCCGGGGATGTCCAAGGCCGAGATCGAGACGGAGTTGAGGCGGCTGCTCGGGATTGAA
AAGGTGATCTGGTTCCCAGGACGGCGCAATGTTGACATTACCGACGTGCATATGGATGCTGAGGCAAGATTCGTG
CGCCCTGGTGTCATCGCTTACTCAAAACCACATCCTATTGCGATTGACCTGTGGCAGGAGCTGTCTACGGAGATC
CGAGAGATTCTGGACCGCGAGACAGACGCTAAGGGTCGGCGCTTGCAGATCCACACCATTGAAGAGCCGGACCCA
CGAGGCTTGGTGAAATCCGATCACGACGAACTAGCGGCGAGTTATGTGAATTTCTATTTTGTTAATGGAGGCCTG
ATTATCCCCAGATTCGGTGACGAAGAAAGGGATCAAAAGGCGCTGGAAATGTTTCAGCGCTTGCTCCCTGAGCGG
GTGATTCGGCAGGTGTATGCCAACGCCATCCCCCTTACTGGTGGGGTGCTTCACTGCGTCACTCAGCAGGTTCCT
GTAATGAAGTGA
Gene >Pro_DTO377G3_2|g5507.t1
ATGAAGCTATTCGAGCGATTCCGCAAATTTCTGTCGAATCTCTATACTACTACACGTACCTGGTTCCAACCCTCT
CACATCAGCAGTAATGAGAGCAAAGTTCAAAGCAGCTACATCTTCCCGGCAGAGTCGGAGCCTCATGAAGCGACA
ATCATGGGATTACCATCTCGATGTTCCCTACCCCCCGATCAGTTTGACGCCATGTGCAATGAATTAGCTCAACTA
GCGGCGGCGATCACTGACTTCGAACCGGTTCGGCTATACGTGAGGCCCGAAGACATCCCATTGGCCGAGTCCCTA
GTCCAGACTTTCGTGAAAGACGCAACAAAAATATCTATCATCCCCTGTCCAATCAACCACTGCTGGGTCCGCGAC
ACAGGCCCAGTCTACGTGCGCGACAAGATAGGCGCATTCCCGAATCGACGCTTCGCAATCAACTTCCGCTTCAAT
GAATGGGGCGGGAAGAAACCCGAAGACGACGGAATCTGCTGGGGTCAGCGATGGCCTGTGATGGACAAGAAGGCA
CTACAGGAAAACACCAATTTTGCGCGGTGGGTAATGGAGCACGATCGCAAGCCCGGCCCCGTTACGCAGATCGAG
ACTCCGATTCGCGCCGAGGGCGGCGGGCTCGTTACCGACGGCGAAGGAACGCTGCTTATCACGGAGAGTAGCATT
GTATGTGATGTGCGCAACCCGGGGATGTCCAAGGCCGAGATCGAGACGGAGTTGAGGCGGCTGCTCGGGATTGAA
AAGGTGATCTGGTTCCCAGGACGGCGCAATGTTGACATTACCGACGTGCATATGGATGCTGAGGCAAGATTCGTG
CGCCCTGGTGTCATCGCTTACTCAAAACCACATCCTATTGCGATTGACCTGTGGCAGGAGCTGTCTACGGAGATC
CGAGAGATTCTGGACCGCGAGACAGACGCTAAGGGTCGGCGCTTGCAGATCCACACCATTGAAGAGCCGGACCCA
CGAGGCTTGGTGAAATCCGATCACGACGAACTAGCGGCGAGTTATGTGAATTTCTATTTTGTTAATGGAGGCCTG
ATTATCCCCAGATTCGGTGACGAAGAAAGGGATCAAAAGGCGCTGGAAATGTTTCAGCGCTTGCTCCCTGAGCGG
GTGATTCGGCAGGTGTATGCCAACGCCATCCCCCTTACTGGTGGGGTGCTTCACTGCGTCACTCAGCAGGTTCCT
GTAATGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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