Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5502.t1
Gene name
Location	scaffold_13:289025..290298
Strand	+
Gene length (bp)	1273
Transcript length (bp)	1074
Coding sequence length (bp)	1074
Protein length (aa)	358

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05368	NmrA	NmrA-like family	3.0E-26	5	227
PF13460	NAD_binding_10	NAD(P)H-binding	6.1E-15	9	146
PF03435	Sacchrp_dh_NADP	Saccharopine dehydrogenase NADP binding domain	3.5E-06	5	100

GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0003674	molecular_function	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5502.t1 MSTKVLLVGAAGETGGSIANGLLDTGNFEVIALVRPISAQKPAITRLQDRGCQIRKCDLKAPEEQLIEALAGIDV VISCVGPAEQQDQIPLAKAAKKTGVKRFVPCGFITVCPPGGIMWLRDEKEIVYNQIRQLWLPYTVVDVGWWYQLA YPRLPSGRVDYAMTSGNDEIIGDGNMPTALTDLRDIGRYMAMIISDPRTLNKKILAYNLVSSQNKIYELMEELSE EKIDRNYVPEETICSRVVAARQASETYPFDPIKFIPRYLAEYQLSWGIRGDNNPEYAKYLGYHTTQDLYPDFQPT DFREYLESVIRGSAKGVYTDRVISRKHQRHFPRTESSDSLYTRIFPRTESSDSLMSR*
Coding	>Pro_DTO377G3_2\|g5502.t1 ATGTCCACCAAGGTTTTGCTCGTTGGAGCAGCGGGTGAAACCGGAGGCTCTATCGCCAACGGGCTGTTGGATACC GGTAACTTTGAGGTCATCGCTCTTGTTCGCCCTATCTCGGCCCAAAAGCCAGCTATCACGCGCCTCCAGGACCGC GGATGCCAGATTAGAAAATGCGACTTGAAGGCCCCAGAGGAGCAGCTCATCGAGGCCTTGGCTGGTATTGATGTG GTGATCAGCTGCGTCGGTCCTGCCGAACAACAGGATCAGATTCCTCTCGCCAAAGCAGCTAAAAAGACCGGTGTG AAGCGATTCGTGCCATGTGGTTTCATCACCGTTTGCCCACCGGGCGGTATCATGTGGTTGCGTGATGAGAAAGAA ATCGTCTACAACCAGATCCGCCAGTTATGGCTTCCCTACACCGTCGTTGACGTCGGCTGGTGGTACCAGCTCGCC TACCCCCGCCTCCCCTCCGGGCGCGTCGACTACGCCATGACATCCGGCAACGATGAGATTATTGGTGATGGCAAC ATGCCCACAGCACTGACCGATTTGCGAGACATCGGTCGCTACATGGCGATGATCATTTCCGACCCCCGCACTTTG AACAAGAAGATCCTCGCCTACAACTTGGTATCCTCGCAAAATAAGATCTACGAGCTCATGGAGGAACTGAGCGAG GAGAAGATCGACCGAAACTACGTTCCCGAAGAAACCATCTGCAGCAGAGTCGTGGCAGCCCGACAAGCCAGTGAA ACCTATCCCTTCGACCCAATCAAGTTCATTCCGCGATACCTGGCTGAATATCAACTGTCGTGGGGAATCCGCGGC GACAACAACCCCGAGTACGCCAAGTATCTCGGCTACCACACCACACAGGACCTGTACCCCGATTTCCAACCGACA GATTTCCGCGAGTATCTTGAGTCCGTCATTCGTGGCTCGGCTAAGGGAGTCTACACCGATCGTGTGATCTCACGG AAGCACCAACGACACTTCCCGCGTACCGAGTCCAGCGATTCCCTCTACACGCGCATATTCCCTCGCACGGAGTCG AGCGACTCGCTCATGTCGCGATGA
Transcript	>Pro_DTO377G3_2\|g5502.t1 ATGTCCACCAAGGTTTTGCTCGTTGGAGCAGCGGGTGAAACCGGAGGCTCTATCGCCAACGGGCTGTTGGATACC GGTAACTTTGAGGTCATCGCTCTTGTTCGCCCTATCTCGGCCCAAAAGCCAGCTATCACGCGCCTCCAGGACCGC GGATGCCAGATTAGAAAATGCGACTTGAAGGCCCCAGAGGAGCAGCTCATCGAGGCCTTGGCTGGTATTGATGTG GTGATCAGCTGCGTCGGTCCTGCCGAACAACAGGATCAGATTCCTCTCGCCAAAGCAGCTAAAAAGACCGGTGTG AAGCGATTCGTGCCATGTGGTTTCATCACCGTTTGCCCACCGGGCGGTATCATGTGGTTGCGTGATGAGAAAGAA ATCGTCTACAACCAGATCCGCCAGTTATGGCTTCCCTACACCGTCGTTGACGTCGGCTGGTGGTACCAGCTCGCC TACCCCCGCCTCCCCTCCGGGCGCGTCGACTACGCCATGACATCCGGCAACGATGAGATTATTGGTGATGGCAAC ATGCCCACAGCACTGACCGATTTGCGAGACATCGGTCGCTACATGGCGATGATCATTTCCGACCCCCGCACTTTG AACAAGAAGATCCTCGCCTACAACTTGGTATCCTCGCAAAATAAGATCTACGAGCTCATGGAGGAACTGAGCGAG GAGAAGATCGACCGAAACTACGTTCCCGAAGAAACCATCTGCAGCAGAGTCGTGGCAGCCCGACAAGCCAGTGAA ACCTATCCCTTCGACCCAATCAAGTTCATTCCGCGATACCTGGCTGAATATCAACTGTCGTGGGGAATCCGCGGC GACAACAACCCCGAGTACGCCAAGTATCTCGGCTACCACACCACACAGGACCTGTACCCCGATTTCCAACCGACA GATTTCCGCGAGTATCTTGAGTCCGTCATTCGTGGCTCGGCTAAGGGAGTCTACACCGATCGTGTGATCTCACGG AAGCACCAACGACACTTCCCGCGTACCGAGTCCAGCGATTCCCTCTACACGCGCATATTCCCTCGCACGGAGTCG AGCGACTCGCTCATGTCGCGATGA
Gene	>Pro_DTO377G3_2\|g5502.t1 ATGTCCACCAAGGTTTTGCTCGTTGGAGCAGCGGGTGAAACCGGAGGCTCTATCGCCAACGGGCTGTTGGATACC GGTAACTTTGTAAGCTCAGCTTCCAGGGCTGTCAATTGACCCCAGACTAATTGTTTTATTTTTCGCTGAACAGGA GGTCATCGCTCTTGTTCGCCCTATCTCGGCCCAAAAGCCAGCTATCACGCGCCTCCAGGACCGCGGATGCCAGAT TAGAAAATGCGACTTGAAGGCCCCAGAGGAGCAGCTCATCGAGGCCTTGGCTGGTATTGATGTGGTGATCAGCTG CGTCGGTCCTGCCGAACAACAGGATCAGATTCCTCTCGCCAAAGCAGCTAAAAAGACCGGTGTGAAGCGATTCGT GCCATGTGGTTTCATCACCGTTTGCCCACCGGGCGGTATCATGTGGTTGCGTGATGAGGTATGAGGAATGTGCCA CGGTACTTTGGGTCAGTGGACTGACCAGGCTTTTACTACGCATAGAAAGAAATCGTCTACAACCAGATCCGCCAG TTATGGCTTCCCTACACCGTCGTTGACGTCGGCTGGTGGTACCAGCTCGCCTACCCCCGCCTCCCCTCCGGGCGC GTCGACTACGCCATGACATCCGGCAACGATGAGATTATTGGTGATGGCAACATGCCCACAGCACTGACCGATTTG CGAGACATCGGTCGCTACATGGCGATGATCATTTCCGACCCCCGCACTTTGAACAAGAAGATCCTCGCCTACAAC TTGGTATCCTCGCAAAATAAGATCTACGAGCTCATGGAGGAACTGAGCGAGGAGAAGATCGACCGAAACTACGTA AGTCGCACAGACGCTCGGCTCCGAATCAAGTCAATGTGGCTAACCGATTTTTTCTTTTTCCGGAGCACAGGTTCC CGAAGAAACCATCTGCAGCAGAGTCGTGGCAGCCCGACAAGCCAGTGAAACCTATCCCTTCGACCCAATCAAGTT CATTCCGCGATACCTGGCTGAATATCAACTGTCGTGGGGAATCCGCGGCGACAACAACCCCGAGTACGCCAAGTA TCTCGGCTACCACACCACACAGGACCTGTACCCCGATTTCCAACCGACAGATTTCCGCGAGTATCTTGAGTCCGT CATTCGTGGCTCGGCTAAGGGAGTCTACACCGATCGTGTGATCTCACGGAAGCACCAACGACACTTCCCGCGTAC CGAGTCCAGCGATTCCCTCTACACGCGCATATTCCCTCGCACGGAGTCGAGCGACTCGCTCATGTCGCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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