Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5490.t1
Gene name
Locationscaffold_13:255831..257687
Strand-
Gene length (bp)1856
Transcript length (bp)1707
Coding sequence length (bp)1707
Protein length (aa) 569

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00743 FMO-like Flavin-binding monooxygenase-like 4.4E-17 42 223
PF07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 1.0E-12 39 256
PF13738 Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 1.6E-08 41 222
PF13434 Lys_Orn_oxgnase L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase 1.8E-07 113 228
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 5.9E-06 42 84

GO

GO Term Description Terminal node
GO:0004499 N,N-dimethylaniline monooxygenase activity Yes
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0050661 NADP binding Yes
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0004497 monooxygenase activity No
GO:0000166 nucleotide binding No
GO:0036094 small molecule binding No
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 19.48 10.23 28.73
5d_25C Five days - 25 degrees Celsius 20.02 10.48 29.56
7d_25C Seven days - 25 degrees Celsius 18.93 9.76 28.11
10d_25C Ten days - 25 degrees Celsius 13.50 6.50 20.50
7d_15C Seven days - 15 degrees Celsius 33.75 19.12 48.38
7d_30C Seven days - 30 degrees Celsius 41.59 24.03 59.15

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.947467 no
3d_25C 7d_25C 0.946011 no
3d_25C 7d_15C 0.021163 yes
3d_25C 7d_30C 0.000700 yes
3d_25C 10d_25C 0.202249 no
5d_25C 7d_25C 0.884641 no
5d_25C 7d_15C 0.028642 yes
5d_25C 7d_30C 0.000700 yes
5d_25C 10d_25C 0.164586 no
7d_25C 7d_15C 0.016361 yes
7d_25C 7d_30C 0.000700 yes
7d_25C 10d_25C 0.260297 no
7d_15C 7d_30C 0.440686 no
7d_15C 10d_25C 0.000700 yes
7d_30C 10d_25C 0.000700 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5490.t1
MASKEETASKPKKYNTELTDYSTVHTDKTGPYADNLEVDALVVGAGFAGVFMLKTLRDRGLKTVIFEAGNDMGGT
WRWNCYPGAGVDSEVPEYEFSWPEVYNTWNWPNNYPNYQNLRDYFDHVDKVVGIKKDCSFNTVVIGAQFDTKEGK
WNIKTADGRTTKAKYLVLGTGFAAKRYIPPWPGMDKFKGIVHHSSFWPEEKIEVKNKRAAVIGTGASGVQITQAW
GPEAGDLKVFQRTPNLAVPMRKRDLTVEEQERLKPNYPELFRYRETSFAGFLYDWYERNTFDDTPEEREAFFESV
WKEGGFRFWVGVYKDNLFNAEANKESYNFWVKKTRDRIGDPVARDLLAPLKMPHYFGIKRPCLERDYYEQFNRES
VHLVNIGNNPIKEFTETGITLEDGTHHELDVVAVATGFDVVTGVMTQLGLKSINGAELEKEWIPGAKTYLGTTVS
GYPNMFHIYGAHGPTLLSNGPTSVAVQGRWISDAIAKIEGNGVKYINPKIEAADKWKTHVVELNDRTLFPTTQST
YMGGSIPGKVSEPVCYSAGIPAYVREIRAALDNWEEGFDIVKA*
Coding >Pro_DTO377G3_2|g5490.t1
ATGGCCAGCAAAGAGGAGACGGCCTCCAAGCCGAAGAAGTATAACACTGAGCTCACGGACTACTCGACTGTTCAC
ACCGACAAGACTGGGCCATATGCGGACAATCTCGAGGTCGATGCTTTGGTCGTCGGTGCTGGTTTTGCCGGTGTT
TTCATGCTCAAGACCCTTCGCGATCGCGGTCTGAAGACGGTCATTTTCGAGGCCGGCAACGACATGGGTGGCACC
TGGCGATGGAATTGCTACCCCGGCGCCGGTGTCGACTCTGAAGTCCCCGAGTACGAGTTCTCTTGGCCCGAGGTC
TACAACACGTGGAATTGGCCCAACAACTACCCCAACTACCAAAACCTGCGTGATTACTTCGATCACGTGGATAAA
GTAGTTGGTATCAAGAAGGACTGCTCTTTCAACACCGTCGTGATTGGAGCTCAGTTCGATACAAAGGAGGGCAAA
TGGAATATCAAGACTGCCGATGGTCGCACGACCAAGGCCAAGTATCTCGTCCTTGGAACCGGCTTTGCCGCCAAG
CGTTACATTCCCCCGTGGCCTGGCATGGATAAATTCAAGGGTATCGTGCACCATTCTTCCTTCTGGCCCGAGGAG
AAAATCGAGGTGAAGAACAAGCGCGCTGCTGTCATCGGCACCGGTGCCTCGGGAGTGCAAATCACGCAGGCTTGG
GGCCCTGAGGCCGGCGACCTCAAAGTCTTTCAACGCACCCCTAACCTCGCCGTCCCCATGCGCAAGCGAGACCTC
ACTGTTGAGGAGCAGGAACGCCTCAAGCCAAACTATCCAGAGCTGTTCCGGTACCGCGAGACCAGCTTTGCGGGC
TTCCTGTATGATTGGTACGAGCGCAACACCTTCGATGACACACCCGAGGAGCGCGAGGCCTTCTTCGAGAGCGTC
TGGAAGGAAGGTGGCTTCCGCTTTTGGGTTGGTGTGTACAAGGATAACTTGTTCAATGCCGAGGCCAACAAGGAG
TCGTACAATTTCTGGGTGAAGAAGACCCGTGATCGTATCGGTGACCCCGTTGCGAGGGATTTGCTTGCGCCACTG
AAGATGCCGCATTACTTCGGTATCAAGCGGCCGTGTCTTGAAAGAGACTACTACGAGCAGTTCAATCGGGAGTCG
GTGCACCTGGTTAACATCGGAAATAACCCGATCAAGGAGTTTACCGAGACGGGCATCACCCTTGAGGACGGAACT
CACCATGAACTTGATGTCGTTGCTGTCGCGACTGGATTTGATGTTGTTACCGGTGTCATGACCCAGCTCGGCCTG
AAGAGCATCAATGGTGCCGAGCTCGAGAAGGAATGGATTCCAGGCGCGAAGACCTACCTCGGTACTACTGTCAGC
GGCTACCCCAATATGTTCCACATCTATGGCGCACATGGTCCGACGCTTCTGAGCAATGGCCCCACGTCGGTCGCG
GTGCAGGGCCGGTGGATTTCCGACGCCATTGCCAAGATCGAGGGCAACGGTGTCAAGTATATCAATCCCAAGATT
GAGGCTGCGGATAAGTGGAAGACTCATGTTGTGGAGCTCAATGACAGGACTCTCTTCCCCACAACACAGTCGACA
TACATGGGTGGTAGCATCCCTGGCAAGGTTTCTGAGCCAGTGTGCTACTCTGCTGGTATCCCCGCTTATGTCAGG
GAGATTCGGGCAGCCCTAGATAACTGGGAAGAGGGATTCGATATCGTCAAAGCCTGA
Transcript >Pro_DTO377G3_2|g5490.t1
ATGGCCAGCAAAGAGGAGACGGCCTCCAAGCCGAAGAAGTATAACACTGAGCTCACGGACTACTCGACTGTTCAC
ACCGACAAGACTGGGCCATATGCGGACAATCTCGAGGTCGATGCTTTGGTCGTCGGTGCTGGTTTTGCCGGTGTT
TTCATGCTCAAGACCCTTCGCGATCGCGGTCTGAAGACGGTCATTTTCGAGGCCGGCAACGACATGGGTGGCACC
TGGCGATGGAATTGCTACCCCGGCGCCGGTGTCGACTCTGAAGTCCCCGAGTACGAGTTCTCTTGGCCCGAGGTC
TACAACACGTGGAATTGGCCCAACAACTACCCCAACTACCAAAACCTGCGTGATTACTTCGATCACGTGGATAAA
GTAGTTGGTATCAAGAAGGACTGCTCTTTCAACACCGTCGTGATTGGAGCTCAGTTCGATACAAAGGAGGGCAAA
TGGAATATCAAGACTGCCGATGGTCGCACGACCAAGGCCAAGTATCTCGTCCTTGGAACCGGCTTTGCCGCCAAG
CGTTACATTCCCCCGTGGCCTGGCATGGATAAATTCAAGGGTATCGTGCACCATTCTTCCTTCTGGCCCGAGGAG
AAAATCGAGGTGAAGAACAAGCGCGCTGCTGTCATCGGCACCGGTGCCTCGGGAGTGCAAATCACGCAGGCTTGG
GGCCCTGAGGCCGGCGACCTCAAAGTCTTTCAACGCACCCCTAACCTCGCCGTCCCCATGCGCAAGCGAGACCTC
ACTGTTGAGGAGCAGGAACGCCTCAAGCCAAACTATCCAGAGCTGTTCCGGTACCGCGAGACCAGCTTTGCGGGC
TTCCTGTATGATTGGTACGAGCGCAACACCTTCGATGACACACCCGAGGAGCGCGAGGCCTTCTTCGAGAGCGTC
TGGAAGGAAGGTGGCTTCCGCTTTTGGGTTGGTGTGTACAAGGATAACTTGTTCAATGCCGAGGCCAACAAGGAG
TCGTACAATTTCTGGGTGAAGAAGACCCGTGATCGTATCGGTGACCCCGTTGCGAGGGATTTGCTTGCGCCACTG
AAGATGCCGCATTACTTCGGTATCAAGCGGCCGTGTCTTGAAAGAGACTACTACGAGCAGTTCAATCGGGAGTCG
GTGCACCTGGTTAACATCGGAAATAACCCGATCAAGGAGTTTACCGAGACGGGCATCACCCTTGAGGACGGAACT
CACCATGAACTTGATGTCGTTGCTGTCGCGACTGGATTTGATGTTGTTACCGGTGTCATGACCCAGCTCGGCCTG
AAGAGCATCAATGGTGCCGAGCTCGAGAAGGAATGGATTCCAGGCGCGAAGACCTACCTCGGTACTACTGTCAGC
GGCTACCCCAATATGTTCCACATCTATGGCGCACATGGTCCGACGCTTCTGAGCAATGGCCCCACGTCGGTCGCG
GTGCAGGGCCGGTGGATTTCCGACGCCATTGCCAAGATCGAGGGCAACGGTGTCAAGTATATCAATCCCAAGATT
GAGGCTGCGGATAAGTGGAAGACTCATGTTGTGGAGCTCAATGACAGGACTCTCTTCCCCACAACACAGTCGACA
TACATGGGTGGTAGCATCCCTGGCAAGGTTTCTGAGCCAGTGTGCTACTCTGCTGGTATCCCCGCTTATGTCAGG
GAGATTCGGGCAGCCCTAGATAACTGGGAAGAGGGATTCGATATCGTCAAAGCCTGA
Gene >Pro_DTO377G3_2|g5490.t1
ATGGCCAGCAAAGAGGAGACGGCCTCCAAGCCGAAGAAGTATAACACTGAGCTCACGGACTACTCGACTGTTCAC
ACCGACAAGACTGGGCCATATGCGGACAATCTCGAGGTCGATGCTTTGGTCGTCGGTGCTGGTTTTGGTAAGTTG
ACAGTAAACGGTTCATCTATTCATTAGCTAACGAGATAGCCGGTGTTTTCATGCTCAAGACCCTTCGCGATCGCG
GTCTGAAGACGGTCATTTTCGAGGCCGGCAACGACATGGGTGGCACCTGGCGATGGAATTGCTACCCCGGCGCCG
GTGTCGACTCTGAAGTCCCCGAGTACGAGTTCTCTTGGCCCGAGGTCTACAACACGTGGAATTGGCCCAACAACT
ACCCCAACTACCAAAACCTGCGTGATTACTTCGATCACGTGGATAAAGTAGTTGGTATCAAGAAGGACTGCTCTT
TCAACACCGTCGTGATTGGAGCTCAGTTCGATACAAAGGAGGGCAAATGGAATATCAAGACTGCCGATGGTCGCA
CGACCAAGGCCAAGTATCTCGTCCTTGGAACCGGCTTTGTGAGCAATTACACCCATCAGTCAAATCAAGACCTAC
TAATGAACCACTTAGGCCGCCAAGCGTTACATTCCCCCGTGGCCTGGCATGGATAAATTCAAGGGTATCGTGCAC
CATTCTTCCTTCTGGCCCGAGGAGAAAATCGAGGTGAAGAACAAGCGCGCTGCTGTCATCGGCACCGGTGCCTCG
GGAGTGCAAATCACGCAGGCTTGGGGCCCTGAGGCCGGCGACCTCAAAGTCTTTCAACGCACCCCTAACCTCGCC
GTCCCCATGCGCAAGCGAGACCTCACTGTTGAGGAGCAGGAACGCCTCAAGCCAAACTATCCAGAGCTGTTCCGG
TACCGCGAGACCAGCTTTGCGGGCTTCCTGTATGATTGGTACGAGCGCAACACCTTCGATGACACACCCGAGGAG
CGCGAGGCCTTCTTCGAGAGCGTCTGGAAGGAAGGTGGCTTCCGCTTTTGGGTTGGTGTGTACAAGGATAACTTG
TTCAATGCCGAGGCCAACAAGGAGTCGTACAATTTCTGGGTGAAGAAGACCCGTGATCGTATCGGTGACCCCGTT
GCGAGGGATTTGCTTGCGCCACTGAAGATGCCGCATTACTTCGGTATCAAGCGGCCGTGTCTTGAAAGAGACTAC
TACGAGCAGTTCAATCGGGAGTCGGTGCACCTGGTTAACATCGGAAATAACCCGATCAAGGAGTTTACCGAGACG
GGCATCACCCTTGAGGACGGAACTCACCATGAACTTGATGTCGTTGCTGTCGCGACTGGATTTGTAAGTTCTTCT
TGATACACTCATGAGACAGCACGCGCTAATAGTCACAGGATGTTGTTACCGGTGTCATGACCCAGCTCGGCCTGA
AGAGCATCAATGGTGCCGAGCTCGAGAAGGAATGGATTCCAGGCGCGAAGACCTACCTCGGTACTACTGTCAGCG
GCTACCCCAATATGTTCCACATCTATGGCGCACATGGTCCGACGCTTCTGAGCAATGGCCCCACGTCGGTCGCGG
TGCAGGGCCGGTGGATTTCCGACGCCATTGCCAAGATCGAGGGCAACGGTGTCAAGTATATCAATCCCAAGATTG
AGGCTGCGGATAAGTGGAAGACTCATGTTGTGGAGCTCAATGACAGGACTCTCTTCCCCACAACACAGTCGACAT
ACATGGGTGGTAGCATCCCTGGCAAGGTTTCTGAGCCAGTGTGCTACTCTGCTGGTATCCCCGCTTATGTCAGGG
AGATTCGGGCAGCCCTAGATAACTGGGAAGAGGGATTCGATATCGTCAAAGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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