© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g5478.t1 |
| Gene name | |
| Location | scaffold_13:223898..225314 |
| Strand | - |
| Gene length (bp) | 1416 |
| Transcript length (bp) | 1416 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.8E-13 | 69 | 339 |
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 2.9E-12 | 85 | 313 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 36 | 58 | 22 |
| 2 | 68 | 90 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 129 | 151 | 22 |
| 5 | 164 | 186 | 22 |
| 6 | 201 | 223 | 22 |
| 7 | 255 | 277 | 22 |
| 8 | 297 | 319 | 22 |
| 9 | 326 | 348 | 22 |
| 10 | 372 | 394 | 22 |
| 11 | 401 | 423 | 22 |
| 12 | 433 | 455 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5478.t1 MATKSVEDSVSPHNDDPEVIYPRVHKNFVTRIYHEPWFQIGLVSVISFCNPGMYNALTGMGGSGQVDSTISANAN VATHACTAGAALLLAGSFYKYLGPRVCLLIGGWTYALYAGSLLNSDRRKNGGPFVIAAGAILGLGAAFFWVAQGT IMVTYTNDNTRGRAIGVFWVIFNLGATIGSLASFGLNYNSKSGTVTDSTYVAYIVVMLFGWLLSVFVCSTENLSG HYHGNRITQESKAVNWTNLKRTVMETLRTVFNWKNMCLYPMFYTANVFYSYQQNAVNGMTFNLRTRALNGALYWI AQMAGGLLMGFMLDLQIVNRRTRAKIGWSILFVTGMAIWGGGYRFQVWDTQRLRQGLKQDIDYKAGSEYLGPMFL YFFYGAYDSFWQSFCYWIMGARSRDPVVNAVIVGAYSALKPAGGAMAWRINAEGVSAMTQFAMNWGLTAGSLLVA IPTVLTIERGDSKIEPSSDHE* |
| Coding | >Pro_DTO377G3_2|g5478.t1 ATGGCCACCAAGTCGGTAGAAGATAGTGTTTCTCCGCACAACGATGACCCCGAAGTCATTTACCCACGAGTGCAC AAAAACTTTGTCACTAGGATCTATCATGAACCTTGGTTCCAGATCGGCCTTGTTTCAGTGATTTCCTTTTGCAAT CCTGGAATGTATAATGCACTCACCGGCATGGGAGGCTCTGGCCAAGTCGACAGCACAATCTCCGCCAACGCCAAC GTCGCAACTCATGCATGCACAGCGGGAGCAGCACTGCTTTTGGCGGGCTCCTTTTACAAGTACCTCGGGCCACGT GTATGCCTCCTCATCGGCGGATGGACCTATGCCCTCTATGCCGGATCACTGTTGAATTCCGACAGGAGGAAGAAT GGCGGCCCTTTCGTGATTGCAGCCGGCGCGATTCTTGGTTTGGGGGCGGCCTTTTTTTGGGTTGCGCAAGGAACC ATCATGGTCACTTATACCAACGATAACACGCGCGGCAGAGCCATCGGGGTATTTTGGGTGATATTCAACCTCGGT GCAACCATTGGCTCGCTGGCCAGTTTTGGTCTCAACTACAACTCAAAATCCGGGACGGTGACAGACTCGACATAT GTAGCCTACATTGTTGTCATGCTCTTTGGATGGCTTTTATCGGTGTTTGTCTGCTCAACCGAAAATCTTTCTGGA CACTACCACGGCAATCGCATCACTCAAGAGTCCAAGGCTGTCAACTGGACGAACCTCAAAAGAACTGTGATGGAG ACACTGCGTACAGTCTTCAACTGGAAGAACATGTGCCTCTATCCCATGTTCTACACTGCAAACGTTTTCTATTCC TATCAACAGAACGCTGTCAATGGCATGACATTCAACCTACGCACACGCGCTCTCAATGGAGCCCTCTACTGGATC GCACAAATGGCAGGCGGGCTTCTGATGGGTTTCATGCTAGACCTCCAAATTGTCAATCGTCGCACGCGAGCCAAG ATTGGCTGGTCTATACTATTCGTCACCGGGATGGCGATCTGGGGCGGAGGCTACCGTTTCCAAGTCTGGGATACC CAGCGTTTACGACAAGGTCTGAAGCAGGATATCGATTACAAAGCAGGAAGTGAATACCTCGGACCAATGTTTCTC TATTTCTTTTATGGCGCCTATGATTCATTTTGGCAATCATTCTGCTACTGGATTATGGGGGCTCGCTCCCGCGAC CCTGTAGTAAATGCTGTCATTGTCGGAGCCTATTCGGCATTGAAGCCAGCAGGCGGTGCGATGGCCTGGAGAATA AACGCCGAGGGCGTCAGTGCCATGACTCAGTTTGCCATGAACTGGGGTCTAACTGCCGGTAGCCTGTTGGTTGCT ATTCCAACGGTGTTGACTATTGAACGGGGAGATTCTAAAATCGAGCCCTCGAGTGACCACGAGTGA |
| Transcript | >Pro_DTO377G3_2|g5478.t1 ATGGCCACCAAGTCGGTAGAAGATAGTGTTTCTCCGCACAACGATGACCCCGAAGTCATTTACCCACGAGTGCAC AAAAACTTTGTCACTAGGATCTATCATGAACCTTGGTTCCAGATCGGCCTTGTTTCAGTGATTTCCTTTTGCAAT CCTGGAATGTATAATGCACTCACCGGCATGGGAGGCTCTGGCCAAGTCGACAGCACAATCTCCGCCAACGCCAAC GTCGCAACTCATGCATGCACAGCGGGAGCAGCACTGCTTTTGGCGGGCTCCTTTTACAAGTACCTCGGGCCACGT GTATGCCTCCTCATCGGCGGATGGACCTATGCCCTCTATGCCGGATCACTGTTGAATTCCGACAGGAGGAAGAAT GGCGGCCCTTTCGTGATTGCAGCCGGCGCGATTCTTGGTTTGGGGGCGGCCTTTTTTTGGGTTGCGCAAGGAACC ATCATGGTCACTTATACCAACGATAACACGCGCGGCAGAGCCATCGGGGTATTTTGGGTGATATTCAACCTCGGT GCAACCATTGGCTCGCTGGCCAGTTTTGGTCTCAACTACAACTCAAAATCCGGGACGGTGACAGACTCGACATAT GTAGCCTACATTGTTGTCATGCTCTTTGGATGGCTTTTATCGGTGTTTGTCTGCTCAACCGAAAATCTTTCTGGA CACTACCACGGCAATCGCATCACTCAAGAGTCCAAGGCTGTCAACTGGACGAACCTCAAAAGAACTGTGATGGAG ACACTGCGTACAGTCTTCAACTGGAAGAACATGTGCCTCTATCCCATGTTCTACACTGCAAACGTTTTCTATTCC TATCAACAGAACGCTGTCAATGGCATGACATTCAACCTACGCACACGCGCTCTCAATGGAGCCCTCTACTGGATC GCACAAATGGCAGGCGGGCTTCTGATGGGTTTCATGCTAGACCTCCAAATTGTCAATCGTCGCACGCGAGCCAAG ATTGGCTGGTCTATACTATTCGTCACCGGGATGGCGATCTGGGGCGGAGGCTACCGTTTCCAAGTCTGGGATACC CAGCGTTTACGACAAGGTCTGAAGCAGGATATCGATTACAAAGCAGGAAGTGAATACCTCGGACCAATGTTTCTC TATTTCTTTTATGGCGCCTATGATTCATTTTGGCAATCATTCTGCTACTGGATTATGGGGGCTCGCTCCCGCGAC CCTGTAGTAAATGCTGTCATTGTCGGAGCCTATTCGGCATTGAAGCCAGCAGGCGGTGCGATGGCCTGGAGAATA AACGCCGAGGGCGTCAGTGCCATGACTCAGTTTGCCATGAACTGGGGTCTAACTGCCGGTAGCCTGTTGGTTGCT ATTCCAACGGTGTTGACTATTGAACGGGGAGATTCTAAAATCGAGCCCTCGAGTGACCACGAGTGA |
| Gene | >Pro_DTO377G3_2|g5478.t1 ATGGCCACCAAGTCGGTAGAAGATAGTGTTTCTCCGCACAACGATGACCCCGAAGTCATTTACCCACGAGTGCAC AAAAACTTTGTCACTAGGATCTATCATGAACCTTGGTTCCAGATCGGCCTTGTTTCAGTGATTTCCTTTTGCAAT CCTGGAATGTATAATGCACTCACCGGCATGGGAGGCTCTGGCCAAGTCGACAGCACAATCTCCGCCAACGCCAAC GTCGCAACTCATGCATGCACAGCGGGAGCAGCACTGCTTTTGGCGGGCTCCTTTTACAAGTACCTCGGGCCACGT GTATGCCTCCTCATCGGCGGATGGACCTATGCCCTCTATGCCGGATCACTGTTGAATTCCGACAGGAGGAAGAAT GGCGGCCCTTTCGTGATTGCAGCCGGCGCGATTCTTGGTTTGGGGGCGGCCTTTTTTTGGGTTGCGCAAGGAACC ATCATGGTCACTTATACCAACGATAACACGCGCGGCAGAGCCATCGGGGTATTTTGGGTGATATTCAACCTCGGT GCAACCATTGGCTCGCTGGCCAGTTTTGGTCTCAACTACAACTCAAAATCCGGGACGGTGACAGACTCGACATAT GTAGCCTACATTGTTGTCATGCTCTTTGGATGGCTTTTATCGGTGTTTGTCTGCTCAACCGAAAATCTTTCTGGA CACTACCACGGCAATCGCATCACTCAAGAGTCCAAGGCTGTCAACTGGACGAACCTCAAAAGAACTGTGATGGAG ACACTGCGTACAGTCTTCAACTGGAAGAACATGTGCCTCTATCCCATGTTCTACACTGCAAACGTTTTCTATTCC TATCAACAGAACGCTGTCAATGGCATGACATTCAACCTACGCACACGCGCTCTCAATGGAGCCCTCTACTGGATC GCACAAATGGCAGGCGGGCTTCTGATGGGTTTCATGCTAGACCTCCAAATTGTCAATCGTCGCACGCGAGCCAAG ATTGGCTGGTCTATACTATTCGTCACCGGGATGGCGATCTGGGGCGGAGGCTACCGTTTCCAAGTCTGGGATACC CAGCGTTTACGACAAGGTCTGAAGCAGGATATCGATTACAAAGCAGGAAGTGAATACCTCGGACCAATGTTTCTC TATTTCTTTTATGGCGCCTATGATTCATTTTGGCAATCATTCTGCTACTGGATTATGGGGGCTCGCTCCCGCGAC CCTGTAGTAAATGCTGTCATTGTCGGAGCCTATTCGGCATTGAAGCCAGCAGGCGGTGCGATGGCCTGGAGAATA AACGCCGAGGGCGTCAGTGCCATGACTCAGTTTGCCATGAACTGGGGTCTAACTGCCGGTAGCCTGTTGGTTGCT ATTCCAACGGTGTTGACTATTGAACGGGGAGATTCTAAAATCGAGCCCTCGAGTGACCACGAGTGA |