Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5476.t1
Gene name
Locationscaffold_13:221354..222279
Strand+
Gene length (bp)925
Transcript length (bp)765
Coding sequence length (bp)765
Protein length (aa) 255

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.2E-62 19 251
PF00106 adh_short short chain dehydrogenase 8.7E-51 10 194
PF08659 KR KR domain 8.5E-05 13 159

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5476.t1
MSQGSRLQGKVAIVTGGGNGFGAAIARRFGEEGAKVIVTDINVEGGEKVASQNPSNLIFQRQDVTQEADWNMVLD
LAFSKFGRVDVLVNNAGTSYRNKPTAEVTEEEWERVFKVNVKSIYLSTKALMPRFIEQGQGGSVINISSTGASRP
RPGLVWYNATKGAVTNATKGLAAEYGPHNIRFNTVAPLLSGTGLFSMFTGMEDTPENREKFIGNVPLGRLTDVDD
IANMCLYLASDEARFINGTEMVVDGGKCV*
Coding >Pro_DTO377G3_2|g5476.t1
ATGTCCCAAGGTTCAAGACTCCAAGGCAAGGTTGCCATCGTCACCGGAGGAGGTAATGGATTCGGTGCAGCTATC
GCTCGACGATTCGGCGAAGAGGGTGCCAAAGTGATCGTTACCGATATCAACGTTGAGGGCGGCGAGAAAGTCGCC
TCGCAGAATCCTTCCAACCTCATCTTTCAGCGCCAAGATGTCACACAAGAAGCGGACTGGAATATGGTGTTGGAT
TTGGCATTCTCCAAGTTCGGGCGAGTGGATGTGTTGGTGAACAATGCGGGCACTAGCTATCGCAACAAGCCGACA
GCAGAGGTCACAGAGGAAGAGTGGGAGCGTGTGTTTAAAGTCAACGTGAAGAGCATTTATCTTTCTACAAAGGCC
CTGATGCCGCGTTTCATCGAGCAAGGCCAGGGTGGGTCGGTGATCAACATCTCCTCCACGGGAGCAAGTCGACCA
CGGCCTGGATTGGTTTGGTATAATGCCACCAAGGGGGCAGTCACTAATGCGACGAAAGGTCTTGCCGCGGAGTAC
GGTCCCCACAATATCCGATTCAACACTGTCGCTCCTCTTCTTTCTGGTACTGGACTGTTTTCGATGTTCACTGGT
ATGGAAGATACCCCTGAGAACCGAGAGAAGTTCATCGGAAATGTGCCATTGGGCCGACTCACCGATGTGGATGAT
ATCGCCAACATGTGCCTGTACCTGGCCAGTGACGAGGCTCGTTTTATCAACGGCACTGAGATGGTAGTGGATGGT
GGAAAGTGTGTTTAG
Transcript >Pro_DTO377G3_2|g5476.t1
ATGTCCCAAGGTTCAAGACTCCAAGGCAAGGTTGCCATCGTCACCGGAGGAGGTAATGGATTCGGTGCAGCTATC
GCTCGACGATTCGGCGAAGAGGGTGCCAAAGTGATCGTTACCGATATCAACGTTGAGGGCGGCGAGAAAGTCGCC
TCGCAGAATCCTTCCAACCTCATCTTTCAGCGCCAAGATGTCACACAAGAAGCGGACTGGAATATGGTGTTGGAT
TTGGCATTCTCCAAGTTCGGGCGAGTGGATGTGTTGGTGAACAATGCGGGCACTAGCTATCGCAACAAGCCGACA
GCAGAGGTCACAGAGGAAGAGTGGGAGCGTGTGTTTAAAGTCAACGTGAAGAGCATTTATCTTTCTACAAAGGCC
CTGATGCCGCGTTTCATCGAGCAAGGCCAGGGTGGGTCGGTGATCAACATCTCCTCCACGGGAGCAAGTCGACCA
CGGCCTGGATTGGTTTGGTATAATGCCACCAAGGGGGCAGTCACTAATGCGACGAAAGGTCTTGCCGCGGAGTAC
GGTCCCCACAATATCCGATTCAACACTGTCGCTCCTCTTCTTTCTGGTACTGGACTGTTTTCGATGTTCACTGGT
ATGGAAGATACCCCTGAGAACCGAGAGAAGTTCATCGGAAATGTGCCATTGGGCCGACTCACCGATGTGGATGAT
ATCGCCAACATGTGCCTGTACCTGGCCAGTGACGAGGCTCGTTTTATCAACGGCACTGAGATGGTAGTGGATGGT
GGAAAGTGTGTTTAG
Gene >Pro_DTO377G3_2|g5476.t1
ATGTCCCAAGGTTCAAGACTCCAAGGCAAGGTTGCCATCGTCACCGGTAAGACTGTTATTCCAAACCACTCCGTT
GCGGATGCTAATATTCTCTTTTCAGGAGGAGGTAATGGATTCGGTGCAGCTATCGCTCGACGATTCGGCGAAGAG
GGTGCCAAAGTGATCGTTACCGATATCAACGTTGAGGGCGGCGAGAAAGTCGCCTCGCAGAATCCTTCCAACCTC
ATCTTTCAGCGCCAAGATGTCACACAAGAAGCGGACTGGAATATGGTGTTGGATTTGGCATTCTCCAAGTTCGGG
CGAGTGGATGTGTTGGTGAACAATGCGGGCACTAGCTATCGCAACAAGGTGGGTTCAACATATTGTATGAGGGGA
CCTCGCTAATTTCCTTTAGCCGACAGCAGAGGTCACAGAGGAAGAGTGGGAGCGTGTGTTTAAAGTCAACGTGAA
GAGCATTTATCTTTCTACAAAGGCCCTGATGCCGCGTTTCATCGAGCAAGGCCAGGGTGGGTCGGTGATCAACAT
CTCCTCCACGGGAGCAAGTCGACCACGGCCTGGATTGGTTTGGTATAATGCCACCAAGGGGGCAGTCACTAATGT
GAGTGAATGTTGGGACTGTGAATGAAAATGATTATTGAATCACTAACAATCCATACAGGCGACGAAAGGTCTTGC
CGCGGAGTACGGTCCCCACAATATCCGATTCAACACTGTCGCTCCTCTTCTTTCTGGTACTGGACTGTTTTCGAT
GTTCACTGGTATGGAAGATACCCCTGAGAACCGAGAGAAGTTCATCGGAAATGTGCCATTGGGCCGACTCACCGA
TGTGGATGATATCGCCAACATGTGCCTGTACCTGGCCAGTGACGAGGCTCGTTTTATCAACGGCACTGAGATGGT
AGTGGATGGTGGAAAGTGTGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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