Protein ID | Pro_DTO377G3_2|g5463.t1 |
Gene name | |
Location | scaffold_13:183935..185567 |
Strand | - |
Gene length (bp) | 1632 |
Transcript length (bp) | 1521 |
Coding sequence length (bp) | 1521 |
Protein length (aa) | 507 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02096 | 60KD_IMP | 60Kd inner membrane protein | 1.1E-22 | 141 | 335 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0032977 | membrane insertase activity | Yes |
GO:0140104 | molecular carrier activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0140597 | protein carrier chaperone | No |
GO:0003674 | molecular_function | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 135 | 157 | 22 |
2 | 296 | 318 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5463.t1 MMGSVGLKGSGAAAALARQRMTAMSRSSRSMSTLRSQSLRFPSQRSQLKSALSGSAPWRMTPAVVGPAAIRFNST SSTHPDVLPEYAIDGSLKNTVDMTEITAIPETIGYLKELGLDFGWGFTTTMQWLIEHTHIWTGLPWWASIVAVGI LTRVAMLKAVIGASENSTRMTNAKPETEPLRKRMFTATTDGNQQEAQILRAQINEINQKHGIVTWKSFIPMLQIP LGFGCFRVVRAMTTLPVPALAAEQVGWLKDLTVADPTYILPMMAAGTLCLSLRRGGESGAMPMMQTEAGKYIVYG FPVMSFAFMAFMPSALQLYFVASGIFGLGQTYLINSEAFRKWMHLSIARRPSNGPKYSAVTQNTESKPLRRLLER LEKEKAAQEKAQEKARSELAASPEQGGKISLIDRIYNKFGKVGTNFSKSVSESIGTSTVEQRLAKDKKKRADEYE QQRKDEDELMRKERNELRRKEHMQTLENERAKASKSLKNSQTAARKPNGRRGSRRA* |
Coding | >Pro_DTO377G3_2|g5463.t1 ATGATGGGATCTGTTGGCCTGAAAGGGTCCGGCGCAGCCGCTGCCCTTGCCCGTCAGAGAATGACCGCCATGTCC CGCTCCTCTAGATCTATGTCTACCTTGCGGTCACAAAGCCTGCGGTTCCCTAGCCAGCGGAGCCAATTGAAATCA GCACTATCCGGCAGTGCTCCCTGGCGCATGACACCAGCTGTTGTCGGCCCGGCCGCAATCCGATTCAATTCCACC TCCTCTACCCACCCCGACGTACTCCCTGAATATGCTATAGACGGCTCATTGAAAAATACGGTAGACATGACTGAG ATTACCGCGATCCCGGAGACCATTGGATATCTCAAGGAGCTTGGGCTGGACTTCGGCTGGGGCTTCACGACGACA ATGCAATGGCTTATCGAGCACACTCACATATGGACCGGCTTGCCATGGTGGGCTAGTATCGTGGCCGTCGGTATT TTGACTCGTGTGGCAATGCTGAAGGCTGTCATTGGCGCCTCCGAGAATTCTACAAGAATGACCAACGCCAAACCG GAGACTGAGCCCCTCCGGAAAAGGATGTTTACTGCCACGACCGATGGGAACCAGCAGGAAGCCCAGATTTTGAGG GCCCAGATCAACGAGATCAACCAGAAGCACGGCATTGTCACATGGAAGTCATTTATTCCCATGTTGCAAATTCCA CTTGGTTTCGGATGTTTCCGAGTCGTGCGAGCAATGACTACGTTGCCAGTGCCGGCCCTAGCCGCGGAACAAGTG GGATGGCTTAAGGATCTGACTGTTGCTGATCCTACGTACATCTTGCCTATGATGGCTGCAGGCACGCTGTGTCTG TCTCTGAGGAGAGGTGGTGAATCCGGCGCTATGCCCATGATGCAAACTGAAGCAGGAAAGTACATCGTGTATGGT TTCCCTGTCATGTCTTTTGCCTTCATGGCGTTCATGCCGAGTGCCCTGCAGCTCTACTTTGTGGCAAGTGGTATT TTCGGCCTAGGTCAAACTTATTTGATCAACTCGGAGGCCTTCCGGAAGTGGATGCACCTGTCGATCGCCCGGAGA CCATCCAATGGACCGAAGTACTCGGCAGTTACCCAAAACACCGAAAGCAAGCCCCTTCGCAGGCTGCTGGAACGG CTTGAGAAGGAAAAAGCCGCGCAAGAGAAAGCACAAGAGAAAGCACGCAGCGAACTAGCTGCCTCCCCGGAACAA GGTGGGAAAATCAGCTTGATTGACCGCATCTACAACAAATTCGGCAAAGTCGGCACCAACTTCTCAAAGTCTGTC TCAGAAAGCATTGGCACTTCAACGGTGGAGCAACGTCTCGCCAAGGACAAGAAGAAGCGCGCTGATGAATACGAA CAACAGCGAAAAGACGAGGATGAGCTCATGCGGAAGGAGCGTAACGAACTCCGCCGCAAGGAGCACATGCAAACC CTAGAGAACGAACGGGCCAAGGCAAGCAAGTCCTTGAAGAATAGCCAGACGGCAGCTCGCAAACCCAACGGGCGG CGTGGCTCTCGCCGTGCTTGA |
Transcript | >Pro_DTO377G3_2|g5463.t1 ATGATGGGATCTGTTGGCCTGAAAGGGTCCGGCGCAGCCGCTGCCCTTGCCCGTCAGAGAATGACCGCCATGTCC CGCTCCTCTAGATCTATGTCTACCTTGCGGTCACAAAGCCTGCGGTTCCCTAGCCAGCGGAGCCAATTGAAATCA GCACTATCCGGCAGTGCTCCCTGGCGCATGACACCAGCTGTTGTCGGCCCGGCCGCAATCCGATTCAATTCCACC TCCTCTACCCACCCCGACGTACTCCCTGAATATGCTATAGACGGCTCATTGAAAAATACGGTAGACATGACTGAG ATTACCGCGATCCCGGAGACCATTGGATATCTCAAGGAGCTTGGGCTGGACTTCGGCTGGGGCTTCACGACGACA ATGCAATGGCTTATCGAGCACACTCACATATGGACCGGCTTGCCATGGTGGGCTAGTATCGTGGCCGTCGGTATT TTGACTCGTGTGGCAATGCTGAAGGCTGTCATTGGCGCCTCCGAGAATTCTACAAGAATGACCAACGCCAAACCG GAGACTGAGCCCCTCCGGAAAAGGATGTTTACTGCCACGACCGATGGGAACCAGCAGGAAGCCCAGATTTTGAGG GCCCAGATCAACGAGATCAACCAGAAGCACGGCATTGTCACATGGAAGTCATTTATTCCCATGTTGCAAATTCCA CTTGGTTTCGGATGTTTCCGAGTCGTGCGAGCAATGACTACGTTGCCAGTGCCGGCCCTAGCCGCGGAACAAGTG GGATGGCTTAAGGATCTGACTGTTGCTGATCCTACGTACATCTTGCCTATGATGGCTGCAGGCACGCTGTGTCTG TCTCTGAGGAGAGGTGGTGAATCCGGCGCTATGCCCATGATGCAAACTGAAGCAGGAAAGTACATCGTGTATGGT TTCCCTGTCATGTCTTTTGCCTTCATGGCGTTCATGCCGAGTGCCCTGCAGCTCTACTTTGTGGCAAGTGGTATT TTCGGCCTAGGTCAAACTTATTTGATCAACTCGGAGGCCTTCCGGAAGTGGATGCACCTGTCGATCGCCCGGAGA CCATCCAATGGACCGAAGTACTCGGCAGTTACCCAAAACACCGAAAGCAAGCCCCTTCGCAGGCTGCTGGAACGG CTTGAGAAGGAAAAAGCCGCGCAAGAGAAAGCACAAGAGAAAGCACGCAGCGAACTAGCTGCCTCCCCGGAACAA GGTGGGAAAATCAGCTTGATTGACCGCATCTACAACAAATTCGGCAAAGTCGGCACCAACTTCTCAAAGTCTGTC TCAGAAAGCATTGGCACTTCAACGGTGGAGCAACGTCTCGCCAAGGACAAGAAGAAGCGCGCTGATGAATACGAA CAACAGCGAAAAGACGAGGATGAGCTCATGCGGAAGGAGCGTAACGAACTCCGCCGCAAGGAGCACATGCAAACC CTAGAGAACGAACGGGCCAAGGCAAGCAAGTCCTTGAAGAATAGCCAGACGGCAGCTCGCAAACCCAACGGGCGG CGTGGCTCTCGCCGTGCTTGA |
Gene | >Pro_DTO377G3_2|g5463.t1 ATGATGGGATCTGTTGGCCTGAAAGGGTCCGGCGCAGCCGCTGCCCTTGCCCGTCAGAGAATGACCGCCATGTCC CGCTCCTCTAGATCTGTCTGTTCTCCCGTTGACTCGGATTTGCAAAAACATCGAAATTGACTTGGCTTTGCAGAT GTCTACCTTGCGGTCACAAAGCCTGCGGTTCCCTAGCCAGCGGAGCCAATTGAAATCAGCACTATCCGGCAGTGC TCCCTGGCGCATGACACCAGCTGTTGTCGGCCCGGCCGCAATCCGATTCAATTCCACCTCCTCTACCCACCCCGA CGTACTCCCTGAATATGCTATAGACGGCTCATTGAAAAATACGGTAGACATGACTGAGATTACCGCGATCCCGGA GACCATTGGATATCTCAAGGAGCTTGGGCTGGACTTCGGCTGGGGCTTCACGACGACAATGCAATGGCTTATCGA GCACACTCACATATGGACCGGCTTGCCATGGTGGGCTAGTATCGTGGCCGTCGGTATTTTGACTCGTGTGGCAAT GCTGAAGGCTGTCATTGGCGCCTCCGAGAATTCTACAAGAATGACCAACGCCAAACCGGAGACTGAGCCCCTCCG GAAAAGGATGTTTACTGCCACGACCGATGGGAACCAGCAGGAAGCCCAGATTTTGAGGGCCCAGATCAACGAGAT CAACCAGAAGCACGGCATTGTCACATGGAAGTCATTTATTCCCATGTTGCAAATTCCACTTGGTTTCGGATGTTT CCGAGTCGTGCGAGCAATGACTACGTTGCCAGTGCCGGCCCTAGCCGCGGAACAAGTGGGATGGCTTAAGGATCT GACTGTTGCTGATCCTACGTACATCTTGCCTATGATGGCTGCAGGCACGCTGTGTCTGTCTCTGAGGGTAAGTTG GTCTCATATGGTCTACTATAACTGCGATACTAACCAAGATAACAGAGAGGTGGTGAATCCGGCGCTATGCCCATG ATGCAAACTGAAGCAGGAAAGTACATCGTGTATGGTTTCCCTGTCATGTCTTTTGCCTTCATGGCGTTCATGCCG AGTGCCCTGCAGCTCTACTTTGTGGCAAGTGGTATTTTCGGCCTAGGTCAAACTTATTTGATCAACTCGGAGGCC TTCCGGAAGTGGATGCACCTGTCGATCGCCCGGAGACCATCCAATGGACCGAAGTACTCGGCAGTTACCCAAAAC ACCGAAAGCAAGCCCCTTCGCAGGCTGCTGGAACGGCTTGAGAAGGAAAAAGCCGCGCAAGAGAAAGCACAAGAG AAAGCACGCAGCGAACTAGCTGCCTCCCCGGAACAAGGTGGGAAAATCAGCTTGATTGACCGCATCTACAACAAA TTCGGCAAAGTCGGCACCAACTTCTCAAAGTCTGTCTCAGAAAGCATTGGCACTTCAACGGTGGAGCAACGTCTC GCCAAGGACAAGAAGAAGCGCGCTGATGAATACGAACAACAGCGAAAAGACGAGGATGAGCTCATGCGGAAGGAG CGTAACGAACTCCGCCGCAAGGAGCACATGCAAACCCTAGAGAACGAACGGGCCAAGGCAAGCAAGTCCTTGAAG AATAGCCAGACGGCAGCTCGCAAACCCAACGGGCGGCGTGGCTCTCGCCGTGCTTGA |