Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g546.t1
Gene name
Location	scaffold_01:1410425..1412554
Strand	-
Gene length (bp)	2129
Transcript length (bp)	1776
Coding sequence length (bp)	1776
Protein length (aa)	592

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00749	tRNA-synt_1c	tRNA synthetases class I (E and Q), catalytic domain	3.0E-92	41	361
PF19269	Anticodon_2	Anticodon binding domain	3.5E-08	515	557

GO

GO Term	Description	Terminal node
GO:0005524	ATP binding	Yes
GO:0004812	aminoacyl-tRNA ligase activity	Yes
GO:0043039	tRNA aminoacylation	Yes
GO:1901360	organic cyclic compound metabolic process	No
GO:0005488	binding	No
GO:0016875	ligase activity, forming carbon-oxygen bonds	No
GO:0006520	cellular amino acid metabolic process	No
GO:0008152	metabolic process	No
GO:0000166	nucleotide binding	No
GO:0006399	tRNA metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0030554	adenyl nucleotide binding	No
GO:0006082	organic acid metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0036094	small molecule binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0017076	purine nucleotide binding	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008150	biological_process	No
GO:0043167	ion binding	No
GO:0019752	carboxylic acid metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0003824	catalytic activity	No
GO:0043038	amino acid activation	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0044238	primary metabolic process	No
GO:0034660	ncRNA metabolic process	No
GO:0009987	cellular process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0043168	anion binding	No
GO:0140101	catalytic activity, acting on a tRNA	No
GO:1901363	heterocyclic compound binding	No
GO:0043436	oxoacid metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0140098	catalytic activity, acting on RNA	No
GO:0032555	purine ribonucleotide binding	No
GO:0032553	ribonucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0016874	ligase activity	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044281	small molecule metabolic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g546.t1 MRCPQGLLARRSWIIQCRAFSSSPAAQAPNLKNKLPNGPARTRFAPSPTGYLHLGSLRTALFNYLLAKRTGGQFL LRIEDTDQKRTIPGAEQRLYDDLQWAGLNWDEGPIVGGPYGPYRQSERTALYQSHANDLVANGHAYRCFCSAERL DSIARHRSEAGLPPGYDRKCGDVSAEESEDRAAKGEAHIIRLKVEEYPMFNDLVYGKSGQNHQNNSKLDFIDRVY NDPVLIKSDGHPTYHLANVVDDHCMKITHVIRGTEWMSSTPMHMALYNAFKWTPPSFAHVPLLVDKSGQKLSKRN ADIDLSSFKDKQGILPSTLVNFTSLLGWSHSEKSDVLSLKELEQIFNLKITRGNTVVSFEKLQFLQKAHVQRLVK SGGPEFDEMVKKVSLVVEESYPLDKLTTILNGRTLSEYIAPLIRADVNNYTNAKEFAQRNSNFFTPKLDRAPYKP ASPQSSPEVPIQALHTAAAALTLVPSAAWNIDTHRDNINSYEGAESVVFPTSEPETPVGSKNAGKIFKKELYHYL RWALLASAPGPGISETMVVLGRDETLRRVQDAKALTQSLVPSAGQRVPKGTLPEDQSWMGTLATSR*
Coding	>Pro_DTO377G3_2\|g546.t1 ATGAGATGTCCCCAAGGGCTACTCGCCAGGCGATCTTGGATCATCCAATGTAGAGCCTTCTCCTCTTCTCCGGCT GCTCAAGCACCTAACTTGAAGAACAAACTGCCGAATGGCCCTGCGCGCACGCGGTTTGCGCCCTCGCCCACCGGA TACCTCCATCTAGGCTCCCTACGGACAGCTCTCTTCAACTATTTACTGGCCAAGCGGACCGGTGGTCAATTTCTG TTGCGCATTGAGGATACGGACCAGAAACGGACAATTCCCGGGGCGGAACAGCGACTCTATGATGATCTCCAATGG GCCGGATTGAACTGGGATGAAGGTCCCATCGTTGGTGGACCCTATGGACCTTATAGACAATCCGAACGAACCGCT TTGTATCAGTCCCATGCCAATGATCTTGTTGCCAATGGCCATGCATACCGATGCTTCTGCTCCGCAGAACGATTG GATTCGATCGCCCGTCACCGCAGCGAGGCAGGACTGCCGCCTGGCTATGACCGGAAATGCGGCGACGTATCTGCC GAAGAATCAGAAGATCGAGCAGCCAAGGGAGAGGCACACATTATTCGACTAAAAGTAGAGGAATACCCCATGTTC AATGATCTGGTTTATGGCAAATCCGGCCAGAATCACCAGAACAACTCGAAGCTGGATTTCATCGACCGTGTTTAC AATGACCCAGTCCTTATCAAATCGGATGGACACCCCACGTATCACTTGGCAAATGTTGTGGATGATCATTGCATG AAGATCACCCATGTTATCCGAGGGACGGAATGGATGTCATCGACACCTATGCACATGGCGCTATATAATGCCTTC AAATGGACGCCACCAAGCTTTGCTCATGTCCCTTTGCTCGTCGACAAAAGTGGGCAAAAGCTCAGCAAGCGCAAC GCAGATATCGACCTCTCGTCATTCAAGGACAAGCAAGGGATCCTCCCATCCACCTTGGTGAACTTCACTTCACTT CTAGGCTGGTCGCATTCCGAGAAGTCTGATGTGTTAAGTCTGAAGGAACTGGAACAGATTTTCAATTTGAAAATT ACTCGAGGAAATACGGTTGTCTCCTTTGAAAAACTCCAGTTCCTCCAGAAGGCACATGTCCAACGCTTGGTCAAA AGCGGCGGACCTGAGTTCGACGAGATGGTGAAGAAGGTGAGCTTGGTCGTGGAAGAAAGCTACCCTCTCGACAAA CTCACCACGATCCTCAACGGTCGCACTCTCTCCGAATACATCGCGCCCCTCATCCGCGCAGATGTCAACAACTAC ACAAACGCAAAGGAGTTCGCCCAGCGTAACTCTAACTTCTTTACCCCCAAACTGGACAGAGCTCCTTACAAACCG GCCTCACCCCAATCCTCCCCAGAAGTCCCAATCCAAGCGCTGCACACTGCAGCAGCCGCCTTAACCCTTGTCCCA TCCGCGGCCTGGAATATCGACACTCACCGCGACAACATTAACAGCTATGAAGGCGCGGAAAGCGTTGTTTTCCCC ACGTCTGAGCCAGAGACACCCGTTGGCTCGAAGAACGCAGGGAAGATATTCAAGAAGGAGCTGTATCACTACCTC CGCTGGGCGCTGTTGGCTTCTGCGCCTGGGCCTGGAATCTCAGAGACTATGGTAGTTCTTGGGAGAGATGAGACA CTTCGCCGAGTGCAGGACGCCAAGGCGTTGACACAGTCCCTTGTTCCTTCTGCTGGCCAGAGAGTTCCTAAGGGA ACTTTGCCTGAAGATCAGAGTTGGATGGGGACTCTTGCGACTAGCCGGTAA
Transcript	>Pro_DTO377G3_2\|g546.t1 ATGAGATGTCCCCAAGGGCTACTCGCCAGGCGATCTTGGATCATCCAATGTAGAGCCTTCTCCTCTTCTCCGGCT GCTCAAGCACCTAACTTGAAGAACAAACTGCCGAATGGCCCTGCGCGCACGCGGTTTGCGCCCTCGCCCACCGGA TACCTCCATCTAGGCTCCCTACGGACAGCTCTCTTCAACTATTTACTGGCCAAGCGGACCGGTGGTCAATTTCTG TTGCGCATTGAGGATACGGACCAGAAACGGACAATTCCCGGGGCGGAACAGCGACTCTATGATGATCTCCAATGG GCCGGATTGAACTGGGATGAAGGTCCCATCGTTGGTGGACCCTATGGACCTTATAGACAATCCGAACGAACCGCT TTGTATCAGTCCCATGCCAATGATCTTGTTGCCAATGGCCATGCATACCGATGCTTCTGCTCCGCAGAACGATTG GATTCGATCGCCCGTCACCGCAGCGAGGCAGGACTGCCGCCTGGCTATGACCGGAAATGCGGCGACGTATCTGCC GAAGAATCAGAAGATCGAGCAGCCAAGGGAGAGGCACACATTATTCGACTAAAAGTAGAGGAATACCCCATGTTC AATGATCTGGTTTATGGCAAATCCGGCCAGAATCACCAGAACAACTCGAAGCTGGATTTCATCGACCGTGTTTAC AATGACCCAGTCCTTATCAAATCGGATGGACACCCCACGTATCACTTGGCAAATGTTGTGGATGATCATTGCATG AAGATCACCCATGTTATCCGAGGGACGGAATGGATGTCATCGACACCTATGCACATGGCGCTATATAATGCCTTC AAATGGACGCCACCAAGCTTTGCTCATGTCCCTTTGCTCGTCGACAAAAGTGGGCAAAAGCTCAGCAAGCGCAAC GCAGATATCGACCTCTCGTCATTCAAGGACAAGCAAGGGATCCTCCCATCCACCTTGGTGAACTTCACTTCACTT CTAGGCTGGTCGCATTCCGAGAAGTCTGATGTGTTAAGTCTGAAGGAACTGGAACAGATTTTCAATTTGAAAATT ACTCGAGGAAATACGGTTGTCTCCTTTGAAAAACTCCAGTTCCTCCAGAAGGCACATGTCCAACGCTTGGTCAAA AGCGGCGGACCTGAGTTCGACGAGATGGTGAAGAAGGTGAGCTTGGTCGTGGAAGAAAGCTACCCTCTCGACAAA CTCACCACGATCCTCAACGGTCGCACTCTCTCCGAATACATCGCGCCCCTCATCCGCGCAGATGTCAACAACTAC ACAAACGCAAAGGAGTTCGCCCAGCGTAACTCTAACTTCTTTACCCCCAAACTGGACAGAGCTCCTTACAAACCG GCCTCACCCCAATCCTCCCCAGAAGTCCCAATCCAAGCGCTGCACACTGCAGCAGCCGCCTTAACCCTTGTCCCA TCCGCGGCCTGGAATATCGACACTCACCGCGACAACATTAACAGCTATGAAGGCGCGGAAAGCGTTGTTTTCCCC ACGTCTGAGCCAGAGACACCCGTTGGCTCGAAGAACGCAGGGAAGATATTCAAGAAGGAGCTGTATCACTACCTC CGCTGGGCGCTGTTGGCTTCTGCGCCTGGGCCTGGAATCTCAGAGACTATGGTAGTTCTTGGGAGAGATGAGACA CTTCGCCGAGTGCAGGACGCCAAGGCGTTGACACAGTCCCTTGTTCCTTCTGCTGGCCAGAGAGTTCCTAAGGGA ACTTTGCCTGAAGATCAGAGTTGGATGGGGACTCTTGCGACTAGCCGGTAA
Gene	>Pro_DTO377G3_2\|g546.t1 ATGAGATGTCCCCAAGGGCTACTCGCCAGGCGATCTTGGATCATCCAATGTAGAGCCTTCTCCTCTTCTCCGGCT GCTCAAGCACCTAACTTGAAGAACAAACTGCCGAATGGCCCTGCGCGCACGCGGTTTGCGCCCTCGCCCACCGGA TACCTCCATCTAGGCTCCCTACGGACAGCTCTCTTCAACTATTTACTGGCCAAGCGGACCGGTGGTCAATTTCTG TTGCGCATTGAGGATACGGACCAGGTTCGTGGATTGCGCTCCGTTGCGTGGACTACGACTGATTACGGTAGAAAC GGACAATTCCCGGGGCGGAACAGCGACTCTATGATGATCTCCAATGGGCCGGATTGAACTGGGATGAAGGTCAGT TTGAAACTTATCTAAAAATGGAGGGAAATTGCTGACTCTCGTTTCGTTGACAGGTCCCATCGTTGGTGGACCCTA TGGACCTTATAGACAAGTGAGGCATCACTCCTTTGTCGCAAGAAATTAATCTCTAATATTTGCTCCCATGCAGTC CGAACGAACCGCTTTGTATCAGTCCCATGCCAATGATCTTGTTGCCAATGGCCATGCATACCGATGCTTCTGCTC CGCAGAACGATTGGATTCGATCGCCCGTCACCGCAGCGAGGCAGGACTGCCGCCTGGCTATGACCGGAAATGCGG CGACGTATCTGCCGAAGAATCAGAAGATCGAGCAGCCAAGGGAGAGGCACACATTATTCGACTAAAAGTAGAGGA ATACCCCATGTTCAATGATCTGGTTTATGGCAAATCCGGCCAGAATCACCAGAACAACTCGAAGCTGGATTTCAT CGACCGTGTTTACAATGACCCAGTCCTTATCAAATCGGATGGACACCCCACGTATCACTTGGCAAATGTTGTGGA TGATCATTGCATGAAGATCACCCATGTTATCCGAGGGACGGTGAGTTTACTTATTATATCTGTAGCTATCAAGTC ACAAGATACTGAACTAACGTCTATCAGGAATGGATGTCATCGACACCTATGCACATGGCGCTATATAATGCCTTC AAATGGACGCCACCAAGCTTTGCTCATGTCCCTTTGCTCGTCGACAAAAGTGGGCAAAAGCTCAGCAAGCGCAAC GCAGATATCGACCTCTCGTCATTCAAGGACAAGCAAGGGATCCTCCCATCCACCTTGGTGAACTTCACTTCACTT CTAGGCTGGTCGCATTCCGAGAAGTCTGATGTGTTAAGTCTGAAGGAACTGGAACAGATTGTATGTTCTTCTTAG TCCCCCGAAAACACACCAACCTCCCTGCTAATACTGATACCAGTTCAATTTGAAAATTACTCGAGGAAATACGGT TGTCTCCTTTGAAAAACTCCAGTTCCTCCAGAAGGCACATGTCCAACGCTTGGTCAAAAGCGGCGGACCTGAGTT CGACGAGATGGTGAAGAAGGTGAGCTTGGTCGTGGAAGAAAGCTACCCTCTCGACAAACTGTAAGTCAGCCACCA GCCGTAAAGAATTCACGCGTGTATTACATAGTACCTAATAGCTGACACCTAGCAGCACCACGATCCTCAACGGTC GCACTCTCTCCGAATACATCGCGCCCCTCATCCGCGCAGATGTCAACAACTACACAAACGCAAAGGAGTTCGCCC AGCGTAACTCTAACTTCTTTACCCCCAAACTGGACAGAGCTCCTTACAAACCGGCCTCACCCCAATCCTCCCCAG AAGTCCCAATCCAAGCGCTGCACACTGCAGCAGCCGCCTTAACCCTTGTCCCATCCGCGGCCTGGAATATCGACA CTCACCGCGACAACATTAACAGCTATGAAGGCGCGGAAAGCGTTGTTTTCCCCACGTCTGAGCCAGAGACACCCG TTGGCTCGAAGAACGCAGGGAAGATATTCAAGAAGGAGCTGTATCACTACCTCCGCTGGGCGCTGTTGGCTTCTG CGCCTGGGCCTGGAATCTCAGAGACTATGGTAGTTCTTGGGAGAGATGAGACACTTCGCCGAGTGCAGGACGCCA AGGCGTTGACACAGTCCCTTGTTCCTTCTGCTGGCCAGAGAGTTCCTAAGGGAACTTTGCCTGAAGATCAGAGTT GGATGGGGACTCTTGCGACTAGCCGGTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences