Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5458.t1
Gene name
Locationscaffold_13:172595..173897
Strand+
Gene length (bp)1302
Transcript length (bp)1245
Coding sequence length (bp)1245
Protein length (aa) 415

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00650 CRAL_TRIO CRAL/TRIO domain 1.2E-15 175 344
PF03765 CRAL_TRIO_N CRAL/TRIO, N-terminal domain 1.1E-07 95 150

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5458.t1
MPDTADQNAPVAPVAPVATAVPEEAVNKPVETPATAAENTEQTAAKDVTASAPVKEEFAANDATVAATGTAEPEA
AKPEEPKVEQPAYLSKNPALGELFNRLPTILESTGHTEMWGVELKDSNDVPTVNVLIKFLRANEGNAKAAETQLS
KALKWRKEVNPLALAESAKYSATKFGGLGYLTTYEENGRPLVFTWNIYGAVKDISATFSDTDEFVQWRAALMELA
VQDLKMKDATEVIEYDGEDPYQMIQVHDYLNVKFFRMDPSVRAATKKVIEVFATAYPELLSEKFFVNVPAIMGWM
FTAMKFILSRNTTRKFHPITNGANLAREFPASIAEQIPKVYGGKGPELKENARFIPLIEDKEEETKCKGKSAEKS
AEEPTVAEPTKEETAKEPATADVPKAESLKEEAVKDGAQ*
Coding >Pro_DTO377G3_2|g5458.t1
ATGCCGGACACCGCTGATCAGAATGCGCCCGTTGCGCCTGTTGCGCCCGTTGCGACCGCTGTGCCTGAAGAAGCC
GTCAATAAGCCCGTGGAAACTCCCGCGACTGCTGCCGAAAACACCGAACAGACTGCAGCCAAAGATGTAACTGCC
AGTGCTCCAGTCAAGGAGGAATTCGCTGCAAATGATGCGACTGTCGCTGCCACTGGCACTGCAGAGCCCGAAGCC
GCAAAGCCTGAAGAACCCAAGGTTGAGCAACCAGCCTACCTGAGCAAGAACCCGGCCTTGGGTGAATTGTTCAAT
CGCCTGCCAACCATCCTCGAAAGCACCGGCCACACTGAGATGTGGGGAGTAGAACTCAAGGATAGCAATGATGTC
CCCACCGTCAACGTGTTGATCAAGTTCCTGCGCGCAAACGAAGGCAATGCCAAAGCTGCTGAGACCCAGCTCAGC
AAGGCACTCAAGTGGCGCAAGGAGGTGAACCCGCTGGCATTAGCGGAGTCCGCGAAATACAGCGCGACCAAGTTC
GGCGGTTTGGGATACCTGACTACCTACGAGGAGAACGGACGGCCCTTGGTGTTTACTTGGAATATCTACGGCGCT
GTGAAGGATATCAGTGCGACATTCTCGGATACCGATGAATTCGTCCAATGGCGTGCCGCTCTCATGGAACTTGCT
GTGCAGGACCTGAAGATGAAGGATGCCACTGAGGTCATCGAGTACGACGGCGAGGATCCCTACCAGATGATCCAA
GTGCACGATTACTTAAATGTCAAGTTCTTCCGTATGGATCCATCTGTCCGTGCCGCAACGAAGAAGGTCATTGAA
GTGTTCGCTACGGCATACCCAGAGCTCCTGAGTGAGAAGTTCTTCGTCAATGTGCCTGCTATCATGGGCTGGATG
TTCACTGCCATGAAGTTTATCCTGAGCCGCAATACTACGCGCAAGTTCCACCCGATCACAAACGGCGCCAACCTG
GCTCGGGAATTCCCTGCTTCAATTGCCGAACAGATCCCCAAAGTCTATGGTGGCAAGGGTCCGGAGCTGAAGGAG
AATGCTAGGTTCATCCCACTGATCGAGGACAAGGAAGAGGAGACAAAGTGCAAGGGCAAGTCTGCCGAGAAGTCT
GCCGAGGAGCCTACTGTTGCTGAGCCCACCAAGGAGGAGACTGCTAAGGAGCCTGCCACAGCAGATGTTCCCAAG
GCCGAGTCTCTGAAGGAAGAAGCTGTGAAGGATGGAGCCCAGTAG
Transcript >Pro_DTO377G3_2|g5458.t1
ATGCCGGACACCGCTGATCAGAATGCGCCCGTTGCGCCTGTTGCGCCCGTTGCGACCGCTGTGCCTGAAGAAGCC
GTCAATAAGCCCGTGGAAACTCCCGCGACTGCTGCCGAAAACACCGAACAGACTGCAGCCAAAGATGTAACTGCC
AGTGCTCCAGTCAAGGAGGAATTCGCTGCAAATGATGCGACTGTCGCTGCCACTGGCACTGCAGAGCCCGAAGCC
GCAAAGCCTGAAGAACCCAAGGTTGAGCAACCAGCCTACCTGAGCAAGAACCCGGCCTTGGGTGAATTGTTCAAT
CGCCTGCCAACCATCCTCGAAAGCACCGGCCACACTGAGATGTGGGGAGTAGAACTCAAGGATAGCAATGATGTC
CCCACCGTCAACGTGTTGATCAAGTTCCTGCGCGCAAACGAAGGCAATGCCAAAGCTGCTGAGACCCAGCTCAGC
AAGGCACTCAAGTGGCGCAAGGAGGTGAACCCGCTGGCATTAGCGGAGTCCGCGAAATACAGCGCGACCAAGTTC
GGCGGTTTGGGATACCTGACTACCTACGAGGAGAACGGACGGCCCTTGGTGTTTACTTGGAATATCTACGGCGCT
GTGAAGGATATCAGTGCGACATTCTCGGATACCGATGAATTCGTCCAATGGCGTGCCGCTCTCATGGAACTTGCT
GTGCAGGACCTGAAGATGAAGGATGCCACTGAGGTCATCGAGTACGACGGCGAGGATCCCTACCAGATGATCCAA
GTGCACGATTACTTAAATGTCAAGTTCTTCCGTATGGATCCATCTGTCCGTGCCGCAACGAAGAAGGTCATTGAA
GTGTTCGCTACGGCATACCCAGAGCTCCTGAGTGAGAAGTTCTTCGTCAATGTGCCTGCTATCATGGGCTGGATG
TTCACTGCCATGAAGTTTATCCTGAGCCGCAATACTACGCGCAAGTTCCACCCGATCACAAACGGCGCCAACCTG
GCTCGGGAATTCCCTGCTTCAATTGCCGAACAGATCCCCAAAGTCTATGGTGGCAAGGGTCCGGAGCTGAAGGAG
AATGCTAGGTTCATCCCACTGATCGAGGACAAGGAAGAGGAGACAAAGTGCAAGGGCAAGTCTGCCGAGAAGTCT
GCCGAGGAGCCTACTGTTGCTGAGCCCACCAAGGAGGAGACTGCTAAGGAGCCTGCCACAGCAGATGTTCCCAAG
GCCGAGTCTCTGAAGGAAGAAGCTGTGAAGGATGGAGCCCAGTAG
Gene >Pro_DTO377G3_2|g5458.t1
ATGCCGGACACCGCTGATCAGAATGCGCCCGTTGCGCCTGTTGCGCCCGTTGCGACCGCTGTGCCTGAAGAAGCC
GTCAATAAGCCCGTGGAAACTCCCGCGACTGCTGCCGAAAACACCGAACAGACTGCAGCCAAAGATGTAACTGCC
AGTGCTCCAGTCAAGGAGGAATTCGCTGCAAATGATGCGACTGTCGCTGCCACTGGCACTGCAGAGCCCGAAGCC
GCAAAGCCTGAAGAACCCAAGGTTGAGCAACCAGCCTACCTGAGCAAGAACCCGGCCTTGGGTGAATTGTTCAAT
CGCCTGCCAACCATCCTCGAAAGCACCGGCCACACTGAGATGTGGGGAGTAGAACTCAAGGATAGCAATGATGTC
CCCACCGTCAACGTGTTGATCAAGTTCCTGCGCGCAAACGAAGGCAATGCCAAAGCTGCTGAGACCCAGCTCAGC
AAGGCACTCAAGTGGCGCAAGGAGGTGAACCCGCTGGCATTAGCGGAGTCCGCGAAATACAGCGCGACCAAGTTC
GGCGGTTTGGGATACCTGACTACCTACGAGGAGAACGGACGGCCCTTGGTGTTTACTTGGAATATCTACGGCGCT
GTGAAGGATATCAGTGCGACATTCTCGGATACCGATGAGTAAGAACCCATCATGGAACGCCATTTACAATTGCAA
TCAATGCTAACTGCGTATAGATTCGTCCAATGGCGTGCCGCTCTCATGGAACTTGCTGTGCAGGACCTGAAGATG
AAGGATGCCACTGAGGTCATCGAGTACGACGGCGAGGATCCCTACCAGATGATCCAAGTGCACGATTACTTAAAT
GTCAAGTTCTTCCGTATGGATCCATCTGTCCGTGCCGCAACGAAGAAGGTCATTGAAGTGTTCGCTACGGCATAC
CCAGAGCTCCTGAGTGAGAAGTTCTTCGTCAATGTGCCTGCTATCATGGGCTGGATGTTCACTGCCATGAAGTTT
ATCCTGAGCCGCAATACTACGCGCAAGTTCCACCCGATCACAAACGGCGCCAACCTGGCTCGGGAATTCCCTGCT
TCAATTGCCGAACAGATCCCCAAAGTCTATGGTGGCAAGGGTCCGGAGCTGAAGGAGAATGCTAGGTTCATCCCA
CTGATCGAGGACAAGGAAGAGGAGACAAAGTGCAAGGGCAAGTCTGCCGAGAAGTCTGCCGAGGAGCCTACTGTT
GCTGAGCCCACCAAGGAGGAGACTGCTAAGGAGCCTGCCACAGCAGATGTTCCCAAGGCCGAGTCTCTGAAGGAA
GAAGCTGTGAAGGATGGAGCCCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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