Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5450.t1
Gene name
Locationscaffold_13:147835..148842
Strand+
Gene length (bp)1007
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03134 TB2_DP1_HVA22 TB2/DP1, HVA22 family 2.0E-27 69 144

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 37 68 31
2 88 110 22
3 115 137 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5450.t1
MASFQERAQHSIAQLDKELSKYPVLANLERQTNVPKVYVILGLIGIYFFLVFFNIAGEFLVNFAGFLIPGYYSLN
ALFTSSTQDDTQWLTYWVVFAFLTVIESAISAAYWFPFYYIFKFVLIMWMALPQTSGAQIVFNSFLQPVLGRFFS
SNGTSSNLRAQAEAASKPHST*
Coding >Pro_DTO377G3_2|g5450.t1
ATGGCCTCTTTCCAGGAACGTGCCCAGCACTCTATTGCTCAGCTCGACAAGGAGCTCTCCAAGTACCCTGTCCTT
GCCAACCTTGAGCGTCAGACCAATGTCCCCAAGGTCTATGTTATCCTTGGCCTTATCGGAATCTACTTCTTCCTT
GTCTTCTTTAACATTGCTGGCGAGTTCCTCGTCAACTTTGCCGGTTTCCTGATCCCCGGTTACTACTCCCTTAAC
GCACTTTTCACCTCAAGCACTCAGGATGACACCCAGTGGCTCACGTACTGGGTTGTGTTTGCTTTCCTGACTGTC
ATTGAGAGTGCCATCAGCGCTGCTTACTGGTTCCCCTTCTACTACATCTTCAAGTTCGTTCTGATCATGTGGATG
GCCCTTCCCCAGACCAGCGGTGCCCAAATTGTCTTCAACTCCTTCCTCCAGCCCGTGCTTGGCCGTTTCTTCAGC
TCCAACGGCACTTCCTCCAACCTGCGCGCTCAGGCCGAGGCTGCGAGCAAGCCCCACTCCACTTAA
Transcript >Pro_DTO377G3_2|g5450.t1
ATGGCCTCTTTCCAGGAACGTGCCCAGCACTCTATTGCTCAGCTCGACAAGGAGCTCTCCAAGTACCCTGTCCTT
GCCAACCTTGAGCGTCAGACCAATGTCCCCAAGGTCTATGTTATCCTTGGCCTTATCGGAATCTACTTCTTCCTT
GTCTTCTTTAACATTGCTGGCGAGTTCCTCGTCAACTTTGCCGGTTTCCTGATCCCCGGTTACTACTCCCTTAAC
GCACTTTTCACCTCAAGCACTCAGGATGACACCCAGTGGCTCACGTACTGGGTTGTGTTTGCTTTCCTGACTGTC
ATTGAGAGTGCCATCAGCGCTGCTTACTGGTTCCCCTTCTACTACATCTTCAAGTTCGTTCTGATCATGTGGATG
GCCCTTCCCCAGACCAGCGGTGCCCAAATTGTCTTCAACTCCTTCCTCCAGCCCGTGCTTGGCCGTTTCTTCAGC
TCCAACGGCACTTCCTCCAACCTGCGCGCTCAGGCCGAGGCTGCGAGCAAGCCCCACTCCACTTAA
Gene >Pro_DTO377G3_2|g5450.t1
ATGGCCTCTTTCCAGGAACGTGCCCAGCACTCTATTGCTCAGCTCGACAAGGAGGTACGTTTCCAGCCATTGTTG
TGTGTTTCGCTGTCCTCCTAGGTCAAACCCTCGCCTGGTGGCTGCAATGCCCCTAAGCGGTAGTGACCACAGCAG
GAGTATCTGCAATCACATCCTTTGATACATACTTCACTATAGTATCTATCGCTGTGGTTTTGAGCTAACATCTGC
TATTTCGTAGCTCTCCAAGTACCCTGTCCTTGCCAACCTTGAGCGTCAGACCAATGTCCCCAAGGTCTATGTTAT
CCTTGGCCTTATCGGAATCTACTTCTTCCTTGTCTTCTTTAACATTGCTGGCGAGTTCCTCGTCAACTTTGCCGG
TTTCCTGATCCCCGGTTACTACTCCCTTAACGCACTTTTCACCTCAAGCACTCAGGATGACACCCAGGTGAGTTT
TTTTTTTGTAAATTTCCCCCTTTACACACAAATTACTAACCTTGTCTTTTTTCGCTCCTCTAGTGGCTCACGGTA
TGTTCACATGATTTTATCACCTGGTTGTTACAATCGTGCGGAAGTAATCACCGCCGATTGTTATCATACACCACC
CACGTGACATATTTCCCGCTTGCACGCGATCAGTAATTCTAACATATGACTTGATAGTACTGGGTTGTGTTTGCT
TTCCTGACTGTCATTGAGAGTGCCATCAGCGCTGCTTACTGGTTCCGTACGTGCCCACAATATGCCGATTTTCTG
ACTATCTTGCTAACTGATCGCAGCCTTCTACTACATCTTCAAGTTCGTTCTGATCATGTGGATGGCCCTTCCCCA
GACCAGGTATGTTACTATTCCATGACCAAGTTAAGACCAGTAGCTGATCTCTTTTAAGCGGTGCCCAAATTGTCT
TCAACTCCTTCCTCCAGCCCGTGCTTGGCCGTTTCTTCAGCTCCAACGGCACTTCCTCCAACCTGCGCGCTCAGG
CCGAGGCTGCGAGCAAGCCCCACTCCACTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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