Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5447.t1
Gene name
Locationscaffold_13:140716..142304
Strand-
Gene length (bp)1588
Transcript length (bp)1287
Coding sequence length (bp)1287
Protein length (aa) 429

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 9.9E-39 268 422
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 8.1E-33 48 157
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 2.2E-27 161 256
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 1.5E-13 284 405

GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0016491 oxidoreductase activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup4256
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g4819.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g7773.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g4065.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g1392.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g1332.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g4444.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g3117.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g5404.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1308.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g2392.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g1199.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g5305.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g7991.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g6538.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g6450.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g2639.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g2957.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g5592.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g6023.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g2685.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g2860.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g4575.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g2403.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g6618.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g750.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g9023.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g3198.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g3880.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g4707.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g4692.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g7270.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g2211.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g8194.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g5447.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5447.t1
MASLTLPLLRTSTRAVRLTRIPALTPYFRSISTKHPTGFVPPSESDLLELRERVQDFTRREIPADVAARTDEQNE
FPAEMWKKMGDAGFLGVTADEEYGGLGMGYQAHCVVMEEISRASGSIGLSYAAHSQLCVNQLSLNGSTEQKERIL
PGLLSGEKVGALAMSEHSAGSDVVSMKTTAKEVDGGWLLNGTKMWITNGPDADYIVVYAKTAPELGSKGITAFIV
EKTFKGFSCARKLDKLGMRGSNTGELIFEDVFVPRENVLGELNRGVRVLMEGLDLERLVLSAGPLGIMQAALDLV
LPYTHVRKQFGAPIAHNQLVQGKLADMYTKLAASRAYTYVTARHVDNAAVEPSEMAVRTHDCAGAILYAAERATE
CTLDAIQLMGGTGYINEIPAGRLLRDAKLYEIGAGTSEIRRMVIGRAFNKEYA*
Coding >Pro_DTO377G3_2|g5447.t1
ATGGCGTCCCTAACCCTCCCTCTCCTTCGCACCTCAACACGCGCGGTACGGCTAACCCGCATCCCCGCACTTACC
CCGTATTTCCGCTCTATCTCAACAAAACACCCCACGGGCTTTGTACCTCCGTCCGAGAGTGATCTCCTAGAGCTG
CGGGAGCGCGTGCAAGATTTCACAAGGCGTGAGATCCCAGCCGATGTTGCTGCACGGACAGATGAACAGAATGAG
TTCCCAGCGGAAATGTGGAAGAAGATGGGTGATGCTGGGTTCCTCGGTGTCACAGCGGACGAGGAGTACGGTGGC
CTGGGTATGGGCTACCAGGCACACTGCGTGGTGATGGAGGAGATCAGTCGAGCATCCGGAAGCATCGGTCTCTCT
TATGCCGCCCACTCCCAGCTCTGTGTGAACCAGCTCTCCCTCAATGGCTCGACGGAACAAAAAGAGCGCATTCTT
CCCGGTCTCCTATCAGGCGAGAAGGTCGGTGCTCTTGCCATGTCGGAGCATTCAGCTGGCTCCGATGTAGTCAGC
ATGAAGACCACGGCGAAGGAAGTTGATGGAGGCTGGCTCTTGAATGGAACTAAGATGTGGATTACGAACGGCCCC
GATGCCGATTACATTGTCGTGTACGCTAAGACAGCGCCTGAACTAGGCTCCAAAGGTATCACAGCATTCATAGTT
GAGAAGACCTTCAAGGGCTTCTCATGCGCACGCAAGCTAGACAAGTTGGGTATGCGTGGCTCTAACACAGGCGAA
CTCATCTTTGAGGATGTTTTCGTTCCCCGGGAGAACGTCCTGGGTGAGTTAAATCGCGGTGTCCGCGTCTTGATG
GAGGGTCTGGACTTGGAGCGACTCGTCCTGAGTGCAGGACCATTAGGAATCATGCAAGCTGCGCTTGACCTCGTC
CTTCCTTACACACACGTGCGCAAGCAATTCGGTGCACCGATCGCCCACAACCAGCTGGTCCAGGGCAAGCTAGCG
GACATGTACACTAAGCTGGCTGCCTCGCGTGCGTACACATATGTTACGGCACGGCATGTAGACAACGCCGCCGTG
GAACCTAGCGAGATGGCCGTGCGCACTCATGACTGCGCCGGTGCAATCCTCTACGCCGCCGAACGTGCGACTGAA
TGCACGCTCGATGCCATCCAACTCATGGGAGGAACCGGCTATATCAACGAGATTCCTGCTGGGCGCCTTCTCCGG
GATGCGAAGCTGTATGAGATTGGCGCTGGTACAAGCGAGATCCGCAGAATGGTCATTGGCCGCGCATTCAACAAG
GAGTATGCTTAA
Transcript >Pro_DTO377G3_2|g5447.t1
ATGGCGTCCCTAACCCTCCCTCTCCTTCGCACCTCAACACGCGCGGTACGGCTAACCCGCATCCCCGCACTTACC
CCGTATTTCCGCTCTATCTCAACAAAACACCCCACGGGCTTTGTACCTCCGTCCGAGAGTGATCTCCTAGAGCTG
CGGGAGCGCGTGCAAGATTTCACAAGGCGTGAGATCCCAGCCGATGTTGCTGCACGGACAGATGAACAGAATGAG
TTCCCAGCGGAAATGTGGAAGAAGATGGGTGATGCTGGGTTCCTCGGTGTCACAGCGGACGAGGAGTACGGTGGC
CTGGGTATGGGCTACCAGGCACACTGCGTGGTGATGGAGGAGATCAGTCGAGCATCCGGAAGCATCGGTCTCTCT
TATGCCGCCCACTCCCAGCTCTGTGTGAACCAGCTCTCCCTCAATGGCTCGACGGAACAAAAAGAGCGCATTCTT
CCCGGTCTCCTATCAGGCGAGAAGGTCGGTGCTCTTGCCATGTCGGAGCATTCAGCTGGCTCCGATGTAGTCAGC
ATGAAGACCACGGCGAAGGAAGTTGATGGAGGCTGGCTCTTGAATGGAACTAAGATGTGGATTACGAACGGCCCC
GATGCCGATTACATTGTCGTGTACGCTAAGACAGCGCCTGAACTAGGCTCCAAAGGTATCACAGCATTCATAGTT
GAGAAGACCTTCAAGGGCTTCTCATGCGCACGCAAGCTAGACAAGTTGGGTATGCGTGGCTCTAACACAGGCGAA
CTCATCTTTGAGGATGTTTTCGTTCCCCGGGAGAACGTCCTGGGTGAGTTAAATCGCGGTGTCCGCGTCTTGATG
GAGGGTCTGGACTTGGAGCGACTCGTCCTGAGTGCAGGACCATTAGGAATCATGCAAGCTGCGCTTGACCTCGTC
CTTCCTTACACACACGTGCGCAAGCAATTCGGTGCACCGATCGCCCACAACCAGCTGGTCCAGGGCAAGCTAGCG
GACATGTACACTAAGCTGGCTGCCTCGCGTGCGTACACATATGTTACGGCACGGCATGTAGACAACGCCGCCGTG
GAACCTAGCGAGATGGCCGTGCGCACTCATGACTGCGCCGGTGCAATCCTCTACGCCGCCGAACGTGCGACTGAA
TGCACGCTCGATGCCATCCAACTCATGGGAGGAACCGGCTATATCAACGAGATTCCTGCTGGGCGCCTTCTCCGG
GATGCGAAGCTGTATGAGATTGGCGCTGGTACAAGCGAGATCCGCAGAATGGTCATTGGCCGCGCATTCAACAAG
GAGTATGCTTAA
Gene >Pro_DTO377G3_2|g5447.t1
ATGGCGTCCCTAACCCTCCCTCTCCTTCGCACCTCAACACGCGCGGTACGGCTAACCCGCATCCCCGCACTTACC
CCGTATTTCCGCTCTATCTCAACAAAACACCCCACGGGCTTTGTACCTCCGTCCGAGAGTGATCTCCTAGAGCTG
CGGGAGCGCGTGCAAGATTTCACAAGTACATTATCTATGCTCTAACCCAAGTCGCACTTCTAACCTTGCTGTAGG
GCGTGAGATCCCAGCCGATGTTGCTGCACGGACAGATGAACAGAATGAGTTCCCAGCGGAAATGTGGAAGAAGAT
GGGTGATGCTGGGTATGGTTCTCTCAAATGGTTGACTCTCTTCTTTGTGAAGGGAGTGTGTTATACAGCGCATAC
TAACATATATCAAGGTTCCTCGGTGTCACAGCGGACGAGGAGTACGGTGGCCTGGGTATGGGCTACCAGGCACAC
TGCGTGGTGATGGAGGAGATCAGTCGAGCATCCGGTATGTCTTCCAGTATATGGCTGAGGGGAACATTGATCTGA
CCTCGATTCTGGATAAAAGGAAGCATCGGTCTCTCTTATGCCGCCCACTCCCAGCTCTGTGTGAACCAGCTCTCC
CTCAATGGCTCGACGGAACAAAAAGAGCGCATTCTTCCCGGTCTCCTATCAGGCGAGAAGGTCGGTGCTCTTGCC
ATGTCGGAGCATTCAGCTGGCTCCGATGTAGTCAGCATGAAGACCACGGCGAAGGAAGTTGATGGAGGCTGGCTC
TTGAATGGAACTAAGATGTGGATTACGAACGTAAGTAGTTTGGGGATATAGAGGGGCTTCGAAGTTCCGATCACA
TTGCTCACACCTTCTTACAGGGCCCCGATGCCGATTACATTGTCGTGTACGCTAAGACAGCGCCTGAACTAGGCT
CCAAAGGTATCACAGCATTCATAGTTGAGAAGACCTTCAAGGGCTTCTCATGCGCACGCAAGCTAGACAAGTTGG
GTATGCGTGGCTCTAACACAGGCGAACTCATCTTTGAGGATGTTTTCGTTCCCCGGGAGAACGTCCTGGGTGAGT
TAAATCGCGGTGTCCGCGTCTTGATGGAGGGTCTGGACTTGGAGCGACTCGTCCTGAGTGCAGGACCATTAGGGT
GAGCCATCCAATACCCCAGCACAACTCTCGTATTCTAACACTCCCCAGAATCATGCAAGCTGCGCTTGACCTCGT
CCTTCCTTACACACACGTGCGCAAGCAATTCGGTGCACCGATCGCCCACAACCAGCTGGTCCAGGGCAAGCTAGC
GGACATGTACACTAAGCTGGCTGCCTCGCGTGCGTACACATATGTTACGGCACGGCATGTAGACAACGCCGCCGT
GGAACCTAGCGAGATGGCCGTGCGCACTCATGACTGCGCCGGTGCAATCCTCTACGCCGCCGAACGTGCGACTGA
ATGCACGCTCGATGCCATCCAACTCATGGGAGGAACCGGCTATATCAACGAGATTCCTGCTGGGCGCCTTCTCCG
GGATGCGAAGCTGTATGAGATTGGCGCTGGTACAAGCGAGATCCGCAGAATGGTCATTGGCCGCGCATTCAACAA
GGAGTATGCTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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