Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g5443.t1
Gene name
Location	scaffold_13:125733..128200
Strand	-
Gene length (bp)	2467
Transcript length (bp)	2127
Coding sequence length (bp)	2127
Protein length (aa)	709

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	5.8E-73	148	356
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	2.2E-37	374	481
PF00289	Biotin_carb_N	Biotin carboxylase, N-terminal domain	2.0E-35	39	143
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	1.2E-16	639	703
PF07478	Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	2.6E-09	173	325

GO

GO Term	Description	Terminal node
GO:0008716	D-alanine-D-alanine ligase activity	Yes
GO:0005524	ATP binding	Yes
GO:0005488	binding	No
GO:0032553	ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0016879	ligase activity, forming carbon-nitrogen bonds	No
GO:0043167	ion binding	No
GO:0016881	acid-amino acid ligase activity	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0030554	adenyl nucleotide binding	No
GO:0000166	nucleotide binding	No
GO:0003824	catalytic activity	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0016874	ligase activity	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5443.t1 MTLSSLLRIVPRLTPTATRGTSRAVSSTTNTPNTIKSLDSILIANRGEIALRVGRTAAERGIRVTTLYTDPDSRS QHALSSPFAFNLGSVSAYLDGDRIIEIAKREGCQAIHPGYGFLSENSAFAQKCTEAGLVFIGPPYKAIEDMGDKS RSKEIMTAAGVPCVPGYHGQNQDPAFLEEQADKITYPVLIKAVKGGGGKGMRIASSKAVFQAQLESAKSEAMSSF GDDNVLVEKYITTPRHIEVQVFADKHGNSVALGERDCSIQRRHQKVLEESPAPHLPDATRKDLWAKARSAAEAVG YEGAGTVEFIFDNDSGDFYFMEMNTRLQVEHPVTEMVTGEDLVHWQILVAEGAKLPLTQEEVEERIAKSGHGIEA RIYAENPEQGFIPDSGRLLHVRTPATSKDIRIDAGFVEGDDVSAHYDPMISKLIVRGETREEALRKLAAALEEYE IAGPVTNIEFLKAICKSPDFIAGEVETGYIEKHRDELFPPKTTEEEVLAQVALACLHRDATSGARSSAGVAGSTV GFTPSYQERQLSFTETGGPGSTDGSTFSVRVQQTADDTFNVEVGGRVFEQVVSHMDPASHIVTSFFPHTRLDTTV IRDEDTIIAFQRGTQYRLTVPRAKWMEKALGLKDVTNSVLAPMPCKVLRVEVQAGDVVEKDQPLVVIESMKMETV IRSPQRGTIARVVHKRGDQCKSGTPLVEFAESE*
Coding	>Pro_DTO377G3_2\|g5443.t1 ATGACCCTCTCATCCCTTCTCCGCATTGTTCCCCGCTTAACCCCGACCGCGACTCGCGGAACATCGCGAGCTGTA TCATCGACCACTAACACACCAAATACAATCAAATCGTTAGATTCAATTCTTATAGCCAATCGAGGAGAAATTGCC TTACGAGTTGGACGCACTGCCGCGGAACGTGGGATCCGCGTAACAACACTCTACACCGACCCGGACAGCCGATCA CAACATGCCTTGAGCTCCCCCTTCGCCTTTAATTTGGGCTCGGTTTCGGCGTACCTCGATGGTGATAGAATTATT GAGATTGCAAAGAGAGAAGGGTGTCAAGCGATCCACCCTGGCTATGGCTTTTTGAGTGAGAACTCTGCATTTGCG CAAAAATGTACCGAGGCCGGGTTGGTCTTCATCGGCCCACCGTATAAGGCCATTGAGGATATGGGTGATAAGAGT CGTTCCAAAGAGATTATGACAGCTGCTGGTGTACCATGCGTCCCAGGCTATCATGGCCAAAATCAAGACCCTGCG TTTCTCGAGGAGCAGGCGGACAAGATCACGTATCCAGTGCTCATCAAAGCCGTCAAAGGAGGTGGTGGAAAGGGC ATGCGTATCGCCAGTTCCAAAGCGGTGTTTCAAGCTCAGCTTGAGTCGGCTAAGTCAGAGGCCATGAGCTCGTTT GGAGATGATAATGTGCTGGTGGAGAAGTATATCACCACACCGCGGCACATTGAAGTACAGGTATTTGCCGACAAG CATGGTAACTCCGTTGCACTAGGAGAGCGAGATTGCAGTATTCAACGGAGGCACCAGAAGGTTCTAGAGGAATCT CCGGCGCCTCATCTCCCTGATGCAACTAGAAAGGACCTCTGGGCAAAGGCACGGTCAGCTGCAGAGGCTGTCGGC TACGAAGGTGCCGGTACAGTGGAGTTCATTTTTGATAATGACTCGGGGGATTTCTATTTTATGGAAATGAACACC CGTCTCCAGGTTGAGCATCCCGTGACTGAAATGGTCACTGGAGAGGATCTTGTCCACTGGCAGATTCTGGTGGCT GAAGGAGCCAAGCTGCCCCTTACGCAAGAAGAAGTGGAAGAGCGTATCGCCAAGAGTGGCCATGGCATCGAGGCC CGAATCTACGCCGAAAACCCAGAACAGGGATTTATCCCTGACTCGGGGCGTTTACTCCATGTGCGAACGCCGGCT ACTTCGAAGGACATCCGCATTGACGCAGGATTTGTGGAAGGAGACGATGTCTCGGCCCACTATGATCCCATGATC TCCAAGCTTATCGTGCGCGGTGAAACCCGTGAGGAGGCTCTCCGCAAGCTAGCTGCTGCTTTGGAAGAATATGAG ATCGCGGGACCCGTGACCAACATAGAGTTCCTAAAAGCCATCTGCAAGAGCCCGGATTTCATCGCTGGTGAGGTC GAGACCGGCTACATTGAGAAGCACCGTGACGAGCTCTTTCCCCCAAAGACCACCGAGGAGGAAGTGCTGGCGCAA GTCGCATTGGCATGTCTACATCGCGACGCCACGTCAGGGGCACGATCCTCAGCAGGGGTTGCAGGCTCAACGGTC GGGTTCACTCCTAGTTACCAAGAGCGACAGTTGTCATTTACCGAGACCGGCGGCCCAGGGTCTACCGACGGCTCC ACGTTCAGTGTGCGAGTACAGCAGACAGCAGATGACACATTCAACGTGGAGGTTGGCGGACGAGTTTTCGAGCAG GTGGTGAGCCACATGGATCCAGCGTCGCACATTGTCACGTCGTTTTTCCCGCACACCCGGTTAGATACAACAGTA ATTCGAGACGAGGATACTATTATCGCATTCCAGCGTGGGACTCAGTACCGACTCACGGTGCCCCGGGCTAAGTGG ATGGAGAAGGCATTGGGACTGAAGGATGTGACAAACAGCGTCCTGGCCCCGATGCCGTGTAAAGTGCTGCGGGTG GAGGTGCAGGCGGGAGATGTGGTGGAGAAAGACCAGCCGTTGGTTGTCATCGAGAGCATGAAGATGGAGACGGTG ATTCGCAGTCCCCAACGGGGAACCATTGCACGGGTCGTGCACAAAAGAGGAGATCAATGCAAAAGCGGAACACCG CTGGTGGAATTCGCCGAATCCGAATAG
Transcript	>Pro_DTO377G3_2\|g5443.t1 ATGACCCTCTCATCCCTTCTCCGCATTGTTCCCCGCTTAACCCCGACCGCGACTCGCGGAACATCGCGAGCTGTA TCATCGACCACTAACACACCAAATACAATCAAATCGTTAGATTCAATTCTTATAGCCAATCGAGGAGAAATTGCC TTACGAGTTGGACGCACTGCCGCGGAACGTGGGATCCGCGTAACAACACTCTACACCGACCCGGACAGCCGATCA CAACATGCCTTGAGCTCCCCCTTCGCCTTTAATTTGGGCTCGGTTTCGGCGTACCTCGATGGTGATAGAATTATT GAGATTGCAAAGAGAGAAGGGTGTCAAGCGATCCACCCTGGCTATGGCTTTTTGAGTGAGAACTCTGCATTTGCG CAAAAATGTACCGAGGCCGGGTTGGTCTTCATCGGCCCACCGTATAAGGCCATTGAGGATATGGGTGATAAGAGT CGTTCCAAAGAGATTATGACAGCTGCTGGTGTACCATGCGTCCCAGGCTATCATGGCCAAAATCAAGACCCTGCG TTTCTCGAGGAGCAGGCGGACAAGATCACGTATCCAGTGCTCATCAAAGCCGTCAAAGGAGGTGGTGGAAAGGGC ATGCGTATCGCCAGTTCCAAAGCGGTGTTTCAAGCTCAGCTTGAGTCGGCTAAGTCAGAGGCCATGAGCTCGTTT GGAGATGATAATGTGCTGGTGGAGAAGTATATCACCACACCGCGGCACATTGAAGTACAGGTATTTGCCGACAAG CATGGTAACTCCGTTGCACTAGGAGAGCGAGATTGCAGTATTCAACGGAGGCACCAGAAGGTTCTAGAGGAATCT CCGGCGCCTCATCTCCCTGATGCAACTAGAAAGGACCTCTGGGCAAAGGCACGGTCAGCTGCAGAGGCTGTCGGC TACGAAGGTGCCGGTACAGTGGAGTTCATTTTTGATAATGACTCGGGGGATTTCTATTTTATGGAAATGAACACC CGTCTCCAGGTTGAGCATCCCGTGACTGAAATGGTCACTGGAGAGGATCTTGTCCACTGGCAGATTCTGGTGGCT GAAGGAGCCAAGCTGCCCCTTACGCAAGAAGAAGTGGAAGAGCGTATCGCCAAGAGTGGCCATGGCATCGAGGCC CGAATCTACGCCGAAAACCCAGAACAGGGATTTATCCCTGACTCGGGGCGTTTACTCCATGTGCGAACGCCGGCT ACTTCGAAGGACATCCGCATTGACGCAGGATTTGTGGAAGGAGACGATGTCTCGGCCCACTATGATCCCATGATC TCCAAGCTTATCGTGCGCGGTGAAACCCGTGAGGAGGCTCTCCGCAAGCTAGCTGCTGCTTTGGAAGAATATGAG ATCGCGGGACCCGTGACCAACATAGAGTTCCTAAAAGCCATCTGCAAGAGCCCGGATTTCATCGCTGGTGAGGTC GAGACCGGCTACATTGAGAAGCACCGTGACGAGCTCTTTCCCCCAAAGACCACCGAGGAGGAAGTGCTGGCGCAA GTCGCATTGGCATGTCTACATCGCGACGCCACGTCAGGGGCACGATCCTCAGCAGGGGTTGCAGGCTCAACGGTC GGGTTCACTCCTAGTTACCAAGAGCGACAGTTGTCATTTACCGAGACCGGCGGCCCAGGGTCTACCGACGGCTCC ACGTTCAGTGTGCGAGTACAGCAGACAGCAGATGACACATTCAACGTGGAGGTTGGCGGACGAGTTTTCGAGCAG GTGGTGAGCCACATGGATCCAGCGTCGCACATTGTCACGTCGTTTTTCCCGCACACCCGGTTAGATACAACAGTA ATTCGAGACGAGGATACTATTATCGCATTCCAGCGTGGGACTCAGTACCGACTCACGGTGCCCCGGGCTAAGTGG ATGGAGAAGGCATTGGGACTGAAGGATGTGACAAACAGCGTCCTGGCCCCGATGCCGTGTAAAGTGCTGCGGGTG GAGGTGCAGGCGGGAGATGTGGTGGAGAAAGACCAGCCGTTGGTTGTCATCGAGAGCATGAAGATGGAGACGGTG ATTCGCAGTCCCCAACGGGGAACCATTGCACGGGTCGTGCACAAAAGAGGAGATCAATGCAAAAGCGGAACACCG CTGGTGGAATTCGCCGAATCCGAATAG
Gene	>Pro_DTO377G3_2\|g5443.t1 ATGACCCTCTCATCCCTTCTCCGCATTGTTCCCCGCTTAACCCCGACCGCGACTCGCGGAACATCGCGAGCTGTA TCATCGACCACTAACACACCAAATACAATCAAATCGTTAGATTCAATTCTTATAGCCAATCGAGGAGAAATTGCC TTGTATGTTGGGCACTGAATCATGTGCAATTTCTGGTGCTAACTTCGATATGCTAGACGAGTTGGACGCACTGCC GCGGAACGTGGGATCCGCGTAACAACACTCTACACCGACCCGGACAGCCGATCACAACATGCCTTGAGCTCCCCC TTCGCCTTTAATTTGGGCTCGGTTTCGGCGTACCTCGATGGTGATAGAATTATTGAGATTGCAAAGAGAGAAGGG TGTCAAGCGATCCACCCTGGCTATGGCTTTGTAAGTCGGCTGTGCATATTTACATTCTAGATGGAATACTAACTT GAGCTTGTTATGCAGTTGAGTGAGAACTCTGCATTTGCGCAAAAATGTACCGAGGCCGGGTTGGTCTTCATCGGC CCACCGTATAAGGCCATTGAGGATATGGGTGATAAGAGGTACGCTCATTGCGTTATTTGAATATTCACTATGCTT ACCAGGCGTGTCCTACCAGTCGTTCCAAAGAGATTATGACAGCTGCTGGTGTACCATGCGTCCCAGGCTATCATG GCCAAAATCAAGACCCTGCGTTTCTCGAGGAGCAGGCGGACAAGATCACGTATCCAGTGCTCATCAAAGCCGTCA AAGGAGGTGGTGGAAAGGGCATGCGTATCGCCAGTTCCAAAGCGGTGTTTCAAGCTCAGCTTGAGTCGGCTAAGT CAGAGGCCATGAGCTCGTTTGGAGATGATAATGTGCTGGTGGAGAAGTATATCACCACACCGCGGCACATTGAAG TACAGGTATTTGCCGACAAGCATGGTAACTCCGTTGCACTAGGAGAGCGAGATTGCAGTATTCAACGGAGGCACC AGAAGGTTCTAGAGGAATCTCCGGCGCCTCATCTCCCTGATGCAACTAGAAAGGACCTCTGGGCAAAGGCACGGT CAGCTGCAGAGGCTGTCGGCTACGAAGGTGCCGGTACAGTGGAGTTCATTTTTGATAATGACTCGGGGGATTTCT ATTTTATGGAAATGAACACCCGTCTCCAGGTTGAGCATCCCGTGACTGAAATGGTCACTGGAGAGGATCTTGTCC ACTGGCAGATTCTGGTGGCTGAAGGAGCCAAGCTGCCCCTTACGCAAGAAGAAGTGGAAGAGCGTATCGCCAAGA GTGGCCATGGCATCGAGGCCCGAATCTACGCCGAAAACCCAGAACAGGGATTTATCCCTGACTCGGGGCGTTTAC TCCATGTGCGAACGCCGGCTACTTCGAAGGACATCCGCATTGACGCAGGATTTGTGGAAGGAGACGATGTCTCGG CCCACTATGATCCCATGATCTCCAAGCTTATCGTGCGCGGTGAAACCCGTGAGGAGGCTCTCCGCAAGCTAGCTG CTGCTTTGGAAGAATATGAGATCGCGGGACCCGTGACCAACATAGAGTTCCTAAAAGCCATCTGCAAGAGCCCGG ATTTCATCGCTGGTGAGGTCGAGACCGGCTACATTGAGAAGCACCGTGACGAGCTCTTTCCCCCAAAGACCACCG AGGAGGAAGTGCTGGCGCAAGTCGCATTGGCATGTCTACATCGCGACGCCACGTCAGGGGCACGATCCTCAGCAG GGGTTGCAGGCTCAACGGTCGGGTTCACTCCTAGTTACCAAGAGCGACAGTTGTCATTTACCGAGACCGGCGGCC CAGGGTCTACCGACGGCTCCACGTTCAGTGTGCGAGTACAGCAGACAGCAGATGACACATTCAACGTGGAGGTTG GCGGACGAGTTTTCGAGCAGGTGGTGAGCCACATGGATCCAGCGTCGCACATTGTCACGTCGTTTTTCCCGCACA CCCGGTTAGATACAACAGTAATTCGAGACGAGGATACTATTATCGCATTCCAGCGTGGGACTCAGTACCGACTCA CGGTGCCCCGGGCTAAGTGGATGGAGAAGGCATTGGGACTGAAGGATGTGACAAACAGCGTCCTGGCCCCGATGC CGTGTAAAGTGCTGCGGGTGGAGGTGCAGGCGGGAGATGTGGTGGAGAAAGACCAGCCGTTGGTTGTCATCGAGA GCATGAAGATGGAGACGGTGATTCGCAGTCCCCAACGGGGAACCATTGCACGGGTCGTGCACAAAAGAGGAGTAA GTCATGCGCCTTTCCCCTGACCAGACTTTCCTGGACTTTCCTGGACCCCCATGACATCTTTTTTGTTTCGTTTGA ATATGTTTAGCGTTTTTAATTCACCCCCTTGAACTCCAAAACCCCCAGAGAAATGTGACTCGAGAACAGCTGACC AACATGTGCCTTGCAGGATCAATGCAAAAGCGGAACACCGCTGGTGGAATTCGCCGAATCCGAATAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences