Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5432.t1
Gene name
Locationscaffold_13:88042..88887
Strand+
Gene length (bp)845
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 2.1E-32 23 203

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 227 244 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5432.t1
MNFTQSISRWASVLLLLCLGLAHAHTVITYPGYRGNNLHTNGTIEQANGLGVAYDAKNGSYIYPYGMEWIYPCGG
MPRSTNRTKWPVSGGAVAFQPGWFPGHATALIYVNLGFGEIPENMSHPVVPPFLIVGPTNNPYPGTVCLPQVPLP
ANITVSPGDYATIQLVETAKHGASLFNCVDIEFAEDGDASVETVTRDNCFNSSDISFEYMYTTSSIGSGAAMLHP
KLSAAAVVPLLLAVAFGVYM*
Coding >Pro_DTO377G3_2|g5432.t1
ATGAATTTCACACAATCCATCTCGCGATGGGCTTCCGTCCTACTCCTGCTGTGCTTGGGTCTGGCGCACGCCCAT
ACCGTCATTACTTACCCTGGCTATCGCGGAAACAATCTCCACACCAACGGCACCATCGAGCAAGCTAACGGTCTT
GGTGTTGCCTACGATGCGAAGAATGGCTCATACATCTACCCATACGGCATGGAGTGGATTTATCCATGCGGTGGT
ATGCCCAGGTCGACCAACCGAACTAAGTGGCCCGTCAGCGGCGGTGCTGTCGCCTTCCAGCCGGGCTGGTTCCCA
GGCCATGCCACTGCCCTGATCTACGTCAATCTCGGCTTCGGCGAAATCCCGGAAAATATGAGCCACCCCGTCGTC
CCGCCCTTCCTCATCGTCGGCCCGACCAACAATCCTTACCCCGGGACTGTGTGTCTGCCACAGGTGCCTCTGCCG
GCCAATATCACCGTCAGCCCGGGTGACTACGCCACAATCCAGCTGGTTGAGACGGCCAAGCACGGCGCTTCTCTA
TTCAATTGCGTGGACATTGAGTTCGCAGAAGATGGCGATGCGTCTGTGGAGACGGTCACTCGCGACAATTGCTTC
AATTCGTCCGATATCAGCTTCGAGTACATGTACACCACCAGTTCCATTGGTTCGGGTGCGGCGATGCTACATCCG
AAACTGTCGGCTGCGGCTGTCGTCCCGCTTTTGCTGGCTGTTGCCTTTGGCGTCTACATGTAG
Transcript >Pro_DTO377G3_2|g5432.t1
ATGAATTTCACACAATCCATCTCGCGATGGGCTTCCGTCCTACTCCTGCTGTGCTTGGGTCTGGCGCACGCCCAT
ACCGTCATTACTTACCCTGGCTATCGCGGAAACAATCTCCACACCAACGGCACCATCGAGCAAGCTAACGGTCTT
GGTGTTGCCTACGATGCGAAGAATGGCTCATACATCTACCCATACGGCATGGAGTGGATTTATCCATGCGGTGGT
ATGCCCAGGTCGACCAACCGAACTAAGTGGCCCGTCAGCGGCGGTGCTGTCGCCTTCCAGCCGGGCTGGTTCCCA
GGCCATGCCACTGCCCTGATCTACGTCAATCTCGGCTTCGGCGAAATCCCGGAAAATATGAGCCACCCCGTCGTC
CCGCCCTTCCTCATCGTCGGCCCGACCAACAATCCTTACCCCGGGACTGTGTGTCTGCCACAGGTGCCTCTGCCG
GCCAATATCACCGTCAGCCCGGGTGACTACGCCACAATCCAGCTGGTTGAGACGGCCAAGCACGGCGCTTCTCTA
TTCAATTGCGTGGACATTGAGTTCGCAGAAGATGGCGATGCGTCTGTGGAGACGGTCACTCGCGACAATTGCTTC
AATTCGTCCGATATCAGCTTCGAGTACATGTACACCACCAGTTCCATTGGTTCGGGTGCGGCGATGCTACATCCG
AAACTGTCGGCTGCGGCTGTCGTCCCGCTTTTGCTGGCTGTTGCCTTTGGCGTCTACATGTAG
Gene >Pro_DTO377G3_2|g5432.t1
ATGAATTTCACACAATCCATCTCGCGATGGGCTTCCGTCCTACTCCTGCTGTGCTTGGGTCTGGCGCACGCCCAT
ACCGTCATTACTTACCCTGGCTATCGCGGAAACAATCTCCACACCAACGGCACCATCGAGCAAGCTAACGGTCTT
GGTGTTGCCTACGATGCGAAGAATGGCTCATACATCTACCCATACGGCATGGAGTGGATTTATCCATGTAAGCAA
GACCTATCTACCCGTCTAGATATCAATCACTGACTCGTTTTTCAAGGCGGTGGTATGCCCAGGTCGACCAACCGA
ACTAAGTGGCCCGTCAGCGGCGGTGCTGTCGCCTTCCAGCCGGGCTGGTTCCCAGGCCATGCCACTGCCCTGATC
TACGTCAATCTCGGCTTCGGCGAAATCCCGGAAAATATGAGCCACCCCGTCGTCCCGCCCTTCCTCATCGTCGGC
CCGACCAACAATCCTTACCCCGGGACTGTGTGTCTGCCACAGGTGCCTCTGCCGGCCAATATCACCGTCAGCCCG
GGTGACTACGCCACAATCCAGCTGGTTGAGACGGCCAAGCACGGCGCTTCTCTATTCAATGTATGTTCCAGTCCC
CTCGTTCCGACCCGGCAATCAATATACTGACTTTCTAGTGCGTGGACATTGAGTTCGCAGAAGATGGCGATGCGT
CTGTGGAGACGGTCACTCGCGACAATTGCTTCAATTCGTCCGATATCAGCTTCGAGTACATGTACACCACCAGTT
CCATTGGTTCGGGTGCGGCGATGCTACATCCGAAACTGTCGGCTGCGGCTGTCGTCCCGCTTTTGCTGGCTGTTG
CCTTTGGCGTCTACATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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