Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5421.t1
Gene name
Locationscaffold_13:44599..45324
Strand+
Gene length (bp)725
Transcript length (bp)501
Coding sequence length (bp)501
Protein length (aa) 167

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 4.5E-19 8 137

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 49 68 19
3 73 95 22
4 126 148 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5421.t1
MPVISRLASIILRVAEIAFAAVVAGVIGHYLAQVNHSGTDIDWWPQSRWIYTEVIAGLSILLGLIWLIPFASGFF
SWPLDILISFAWFAAFGVLVDTIRRLPCGSIWSWHFRGDQTCGRWKAAEAFSFLSAIVWLASGIVGIWFTFRVRQ
STSDGVRRRRWGRSAV*
Coding >Pro_DTO377G3_2|g5421.t1
ATGCCCGTCATTTCACGCCTCGCGTCTATCATCCTCCGCGTTGCGGAGATTGCCTTTGCAGCTGTCGTCGCAGGT
GTCATCGGACACTACCTTGCCCAGGTTAACCACAGCGGCACAGATATTGACTGGTGGCCTCAGTCGCGATGGATC
TATACTGAAGTAATCGCCGGCTTATCGATACTGCTGGGCCTCATATGGCTGATCCCGTTCGCGTCGGGATTCTTC
TCCTGGCCTCTGGACATCCTCATTTCATTTGCTTGGTTCGCTGCATTCGGTGTCCTCGTCGACACCATCCGCCGC
CTGCCCTGCGGCAGCATCTGGTCCTGGCACTTTAGAGGGGACCAGACATGTGGTCGCTGGAAGGCAGCTGAGGCT
TTCAGCTTCCTTTCAGCCATTGTCTGGCTTGCTTCTGGTATCGTGGGGATCTGGTTCACCTTCCGTGTTCGCCAA
AGCACCTCTGACGGAGTTCGCCGCCGCCGCTGGGGTCGCTCCGCCGTCTAG
Transcript >Pro_DTO377G3_2|g5421.t1
ATGCCCGTCATTTCACGCCTCGCGTCTATCATCCTCCGCGTTGCGGAGATTGCCTTTGCAGCTGTCGTCGCAGGT
GTCATCGGACACTACCTTGCCCAGGTTAACCACAGCGGCACAGATATTGACTGGTGGCCTCAGTCGCGATGGATC
TATACTGAAGTAATCGCCGGCTTATCGATACTGCTGGGCCTCATATGGCTGATCCCGTTCGCGTCGGGATTCTTC
TCCTGGCCTCTGGACATCCTCATTTCATTTGCTTGGTTCGCTGCATTCGGTGTCCTCGTCGACACCATCCGCCGC
CTGCCCTGCGGCAGCATCTGGTCCTGGCACTTTAGAGGGGACCAGACATGTGGTCGCTGGAAGGCAGCTGAGGCT
TTCAGCTTCCTTTCAGCCATTGTCTGGCTTGCTTCTGGTATCGTGGGGATCTGGTTCACCTTCCGTGTTCGCCAA
AGCACCTCTGACGGAGTTCGCCGCCGCCGCTGGGGTCGCTCCGCCGTCTAG
Gene >Pro_DTO377G3_2|g5421.t1
ATGCCCGTCATTTCACGCCTCGCGTCTATCATCCTCCGCGTTGCGGAGATTGCCTTTGCAGCTGTGAATAGCCCT
GATCAAGCTCAACTTATTGACCGCATCTGACTCTGTTCTAGGTCGTCGCAGGTGTCATCGGACACTACCTTGCCC
AGGTTAACCACAGCGGCACAGATATTGACTGGTGGCCTCAGTCGCGATGGATCTATACTGAAGTAATCGCCGGCT
TATCGATACTGCTGGGCCTCATATGGCTGATCCCGTTCGCGTCGGGATTCTTCTCCTGGCCTCGTATGTGCTGGA
TATACCTGGTGAATATGGAGCAATACTTACTGGAATATAGTGGACATCCTCATTTCATTTGCTTGGTTCGCTGCA
TTCGGTGTCCTCGTCGACACCATCCGCCGCCTGCCCTGCGGCAGCATCTGGTCCTGGCACTTTAGAGGGGACCAG
ACATGTGGTCGCTGGAAGGCAGCTGAGGCTTTCAGCTTCCTTTCAGCCATTGTCTGGCTTGCTTCTGGTATCGTG
GTATGTGATGAGATGATACAACCCACATGTGAATACGGACTAAGAAACTCTCAGGGGATCTGGTTCACCTTCCGT
GTTCGCCAAAGCACCTCTGACGGAGTGTAAGTAACCAATGACATCTTCTGATAATAGCTTCTTGATTGATTGATA
CTGATATACTGAACAGTCGCCGCCGCCGCTGGGGTCGCTCCGCCGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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