Protein ID | Pro_DTO377G3_2|g5417.t1 |
Gene name | |
Location | scaffold_13:26559..29563 |
Strand | - |
Gene length (bp) | 3004 |
Transcript length (bp) | 1854 |
Coding sequence length (bp) | 1854 |
Protein length (aa) | 618 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01184 | Gpr1_Fun34_YaaH | GPR1/FUN34/yaaH family | 2.1E-63 | 60 | 267 |
PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | 3.1E-14 | 411 | 514 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005525 | GTP binding | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0036094 | small molecule binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0043167 | ion binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0005575 | cellular_component | No |
GO:0000166 | nucleotide binding | No |
GO:0005488 | binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0003674 | molecular_function | No |
GO:0032561 | guanyl ribonucleotide binding | No |
GO:0019001 | guanyl nucleotide binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 74 | 96 | 22 |
2 | 100 | 122 | 22 |
3 | 129 | 151 | 22 |
4 | 171 | 190 | 19 |
5 | 197 | 216 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5417.t1 MEHTITVTTVQRTKAASNHHIQPSTQDKIGSPVVSQASRDYSPPPSNIPETPIPLCKLELQSLPVNVRTIANPAP LGLCAFALTSFLSNCVALNVGGMKVAGVSMSLALSYGGIAQVLAGMWEMAAGNTFGATTFCSFGAYWISFSLIST FDDTDFTRSTVDPLCQNELLMGLFMLGWCIFTTLMLLCTLKSNLAMFSLYFFMDMNYLLLGIAHIQCNSHGEIPV ALERTGGIFGILAASSAWYNAFAAISDINNSFLIVPVGHFPWSTAAHLRRVKAKEFVPRNVFPHYGAIPRSYFLG HHRAGLTKMKSMLSTIDYVVECRDYRAPVTSINPMFEEALGKMRRLVVYTKRDLGSTPRSSAQKIIERKLQGFDP KSAVFFTSSSSRQDVSQIIKHLRTDAEAPDKLVGCRVLVVGMPNVGKSTLINNLRNSGTGKAKAMKTGQQPGITR KVATQVKIIDRENGSHVYVLDTPGVFMPYVPEAENMLKLALCGCVKDNVISAITMADYLLYHINLNDPSVYKRWS EPTNDVVPLIESFARQTGLLAKGGVPMMDGAALLFIQKWRQGELGQFLVDDLEAEEQRRGDPTQTPRMSMTQALR VERTTRKNKPDATTSDL* |
Coding | >Pro_DTO377G3_2|g5417.t1 ATGGAGCATACTATTACCGTCACTACGGTCCAAAGAACCAAGGCTGCATCAAACCATCACATCCAGCCGAGTACG CAGGACAAGATTGGCTCCCCAGTGGTGTCTCAAGCCAGCCGTGATTACTCTCCGCCCCCATCAAATATTCCGGAG ACACCTATACCATTGTGCAAACTGGAACTTCAGTCTTTGCCTGTTAACGTTCGGACCATTGCCAATCCCGCTCCC CTGGGTCTATGTGCATTTGCATTGACATCGTTCCTCTCGAATTGTGTCGCCCTCAATGTGGGAGGTATGAAAGTA GCAGGGGTCAGTATGTCCTTGGCTTTGAGTTATGGTGGTATAGCGCAGGTGTTGGCTGGAATGTGGGAAATGGCG GCTGGGAATACTTTTGGTGCGACGACCTTTTGTTCTTTCGGTGCCTATTGGATATCATTTTCTCTGATCTCGACT TTCGACGATACCGATTTTACAAGAAGTACAGTAGATCCACTATGTCAGAACGAGCTCTTAATGGGCCTGTTCATG TTGGGCTGGTGCATCTTCACTACACTGATGCTCTTGTGCACTCTCAAATCTAATCTTGCGATGTTCTCTCTGTAC TTTTTCATGGACATGAACTACCTTCTACTCGGCATTGCGCACATTCAATGCAACTCTCATGGCGAGATTCCGGTT GCACTTGAGAGGACAGGCGGTATTTTTGGCATTTTGGCAGCGTCTTCGGCTTGGTATAATGCCTTTGCGGCTATT TCTGATATCAATAACAGTTTTCTAATAGTTCCCGTTGGTCATTTCCCTTGGTCTACAGCTGCACATCTTCGTCGG GTTAAGGCTAAAGAGTTCGTTCCGCGCAATGTATTCCCTCATTATGGGGCTATTCCACGGTCCTATTTCTTAGGA CACCACAGGGCTGGTCTGACCAAGATGAAAAGCATGCTCTCAACTATCGACTATGTTGTCGAGTGTCGTGATTAT CGAGCTCCCGTGACCTCGATCAACCCCATGTTTGAGGAAGCTTTGGGCAAGATGCGACGACTGGTCGTCTACACT AAGAGAGATCTGGGAAGCACTCCCAGATCATCTGCCCAGAAAATAATAGAACGCAAACTGCAAGGTTTTGATCCA AAGAGCGCCGTGTTTTTCACCAGCTCGTCCTCCCGGCAAGATGTCAGCCAGATCATCAAGCACCTTCGAACCGAC GCCGAAGCTCCCGATAAGTTAGTAGGCTGTCGAGTGTTAGTTGTCGGAATGCCCAATGTTGGCAAGTCAACACTG ATCAACAATCTACGCAACTCAGGCACGGGCAAAGCCAAGGCTATGAAAACCGGGCAGCAACCCGGTATCACACGC AAGGTAGCCACGCAGGTGAAGATCATTGATCGTGAGAACGGATCACATGTCTACGTTCTGGACACGCCGGGAGTG TTTATGCCATATGTTCCAGAAGCAGAGAATATGCTCAAGCTGGCTCTCTGTGGCTGTGTCAAGGACAATGTCATT TCCGCGATAACCATGGCGGATTACTTGTTGTATCATATAAACCTGAATGATCCATCAGTATACAAGCGCTGGTCG GAACCGACCAATGATGTGGTTCCATTAATTGAAAGCTTTGCGCGCCAAACTGGCCTGCTCGCAAAAGGCGGGGTG CCAATGATGGATGGAGCCGCACTTCTTTTTATACAGAAATGGAGACAAGGAGAGCTAGGTCAATTTTTGGTGGAC GACCTAGAAGCAGAGGAACAACGGCGGGGAGATCCTACGCAAACACCGCGCATGAGCATGACGCAGGCCTTGAGA GTGGAAAGGACAACTCGAAAGAACAAACCGGATGCAACAACGAGCGATCTGTAA |
Transcript | >Pro_DTO377G3_2|g5417.t1 ATGGAGCATACTATTACCGTCACTACGGTCCAAAGAACCAAGGCTGCATCAAACCATCACATCCAGCCGAGTACG CAGGACAAGATTGGCTCCCCAGTGGTGTCTCAAGCCAGCCGTGATTACTCTCCGCCCCCATCAAATATTCCGGAG ACACCTATACCATTGTGCAAACTGGAACTTCAGTCTTTGCCTGTTAACGTTCGGACCATTGCCAATCCCGCTCCC CTGGGTCTATGTGCATTTGCATTGACATCGTTCCTCTCGAATTGTGTCGCCCTCAATGTGGGAGGTATGAAAGTA GCAGGGGTCAGTATGTCCTTGGCTTTGAGTTATGGTGGTATAGCGCAGGTGTTGGCTGGAATGTGGGAAATGGCG GCTGGGAATACTTTTGGTGCGACGACCTTTTGTTCTTTCGGTGCCTATTGGATATCATTTTCTCTGATCTCGACT TTCGACGATACCGATTTTACAAGAAGTACAGTAGATCCACTATGTCAGAACGAGCTCTTAATGGGCCTGTTCATG TTGGGCTGGTGCATCTTCACTACACTGATGCTCTTGTGCACTCTCAAATCTAATCTTGCGATGTTCTCTCTGTAC TTTTTCATGGACATGAACTACCTTCTACTCGGCATTGCGCACATTCAATGCAACTCTCATGGCGAGATTCCGGTT GCACTTGAGAGGACAGGCGGTATTTTTGGCATTTTGGCAGCGTCTTCGGCTTGGTATAATGCCTTTGCGGCTATT TCTGATATCAATAACAGTTTTCTAATAGTTCCCGTTGGTCATTTCCCTTGGTCTACAGCTGCACATCTTCGTCGG GTTAAGGCTAAAGAGTTCGTTCCGCGCAATGTATTCCCTCATTATGGGGCTATTCCACGGTCCTATTTCTTAGGA CACCACAGGGCTGGTCTGACCAAGATGAAAAGCATGCTCTCAACTATCGACTATGTTGTCGAGTGTCGTGATTAT CGAGCTCCCGTGACCTCGATCAACCCCATGTTTGAGGAAGCTTTGGGCAAGATGCGACGACTGGTCGTCTACACT AAGAGAGATCTGGGAAGCACTCCCAGATCATCTGCCCAGAAAATAATAGAACGCAAACTGCAAGGTTTTGATCCA AAGAGCGCCGTGTTTTTCACCAGCTCGTCCTCCCGGCAAGATGTCAGCCAGATCATCAAGCACCTTCGAACCGAC GCCGAAGCTCCCGATAAGTTAGTAGGCTGTCGAGTGTTAGTTGTCGGAATGCCCAATGTTGGCAAGTCAACACTG ATCAACAATCTACGCAACTCAGGCACGGGCAAAGCCAAGGCTATGAAAACCGGGCAGCAACCCGGTATCACACGC AAGGTAGCCACGCAGGTGAAGATCATTGATCGTGAGAACGGATCACATGTCTACGTTCTGGACACGCCGGGAGTG TTTATGCCATATGTTCCAGAAGCAGAGAATATGCTCAAGCTGGCTCTCTGTGGCTGTGTCAAGGACAATGTCATT TCCGCGATAACCATGGCGGATTACTTGTTGTATCATATAAACCTGAATGATCCATCAGTATACAAGCGCTGGTCG GAACCGACCAATGATGTGGTTCCATTAATTGAAAGCTTTGCGCGCCAAACTGGCCTGCTCGCAAAAGGCGGGGTG CCAATGATGGATGGAGCCGCACTTCTTTTTATACAGAAATGGAGACAAGGAGAGCTAGGTCAATTTTTGGTGGAC GACCTAGAAGCAGAGGAACAACGGCGGGGAGATCCTACGCAAACACCGCGCATGAGCATGACGCAGGCCTTGAGA GTGGAAAGGACAACTCGAAAGAACAAACCGGATGCAACAACGAGCGATCTGTAA |
Gene | >Pro_DTO377G3_2|g5417.t1 ATGGAGCATACTATTACCGTCACTACGGTCCAAAGAACCAAGGCTGCATCAAACCATCACATCCAGCCGAGTACG CAGGACAAGATTGGCTCCCCAGTGGTGTCTCAAGCCAGCCGTGATTACTCTCCGCCCCCATCAAATATTCCGGAG ACACCTATACCATTGTGCAAACTGGAACTTCAGTCTTTGCCTGTTAACGTTCGGACCATTGCCAATCCCGCTCCC CTGGGTCTATGTGCATTTGCATTGACATCGTTCCTCTCGAATTGTGTCGCCCTCAATGTGGGAGGTATGAAAGTA GCAGGGGTCAGTATGTCCTTGGCTTTGAGTTATGGTGGTATAGCGCAGGTGTTGGCTGGAATGTGGTATGTCCTA TCCTGCTTTGTGTGTTGCCTAGTGCTAATAAGAGTAGGGAAATGGCGGCTGGGAATACTTTTGGTGCGACGACCT TTTGTTCTTTCGGTGCCTATTGGATATCATTTTCTCTGATCTCGACTTTCGACGATACCGATTTTACAAGAAGTA CAGTAGATCCACTATGTCAGAACGAGCTCTTAATGGGCCTGTTCATGTTGGTAAGCCAATTCCATCAAATTCAAG ATTTACTATCATGGGAAAAGATACTGAGAACGATGTATGTATACAGGGCTGGTGCATCTTCACTACACTGATGCT CTTGTGCACTCTCAAATCTAATCTTGCGATGTTCTCTCTGTACTTTTTCATGGACATGAACTACCTTCTACTCGG CATTGCGCACATTCAATGCAACTCTCATGGCGAGATTCCGGTTGCACTTGAGAGGACAGGCGGTATTTTTGGCAT TTTGGCAGCGTCTTCGGCTTGGTATAATGCCTTTGCGGCTATTTCTGATATCAATAACAGTTTTCTAATAGTTCC CGTTGGTCATTTCCCTTGGTCTACAGCTGCACATCTTCGTCGGGTTAAGGCTAAAGAGGTGTGATCTCGGACTAA GAACGGAAAAACCACAACATATAGTCCCTCTCTTCATGGTACGAATGTCTGTCGTGGACCGGCGAATCAAGAAAT GAAGTATTCTTGACTATTGTGTTTGATCCCGTTGCTCAATAGGAAGATTATATTCTGAGAAAGATACTTGAAACA TTGGACCTCAAATTGAATTGTGCTCTGAGAATACTGGCAGTATTCCTTGCATAAGTCTGATACAAAAGATACCCG TATGATTCCTGGGTGGACCAGCCACCACACTGTTGGTCAATGAGCCTTCGAGGGTGACGCTGTCGGAGCATACGG CAGAAGGAAACCCCGACCAGGAAAACGGAGAAAGACAAGTGGAAAATGAGTGACAATTGAGCTACGTAGAACGAA AAATCCCGAGACACATTGGGTGGGGTTGGACAAGAGAGGCAGGGCTGCCTCGGGGTTTGTCTGTTTGCGTCACAT ACACGGCTAAACCACGGTGATCACTTTAGACAAAAAGTAGCAGTGGTAGAGATCTAGGGGGCCCAGTTAACGGGC TTTGGCAAGCATCGACGGGCTCTGGCGGGCTCTGGCGGGCTTTGGTAACCATCTCCCGCTCGGCAGCCGAACGTA CCACGCGCCAAATTATTATTAGAAGTAGGGTTGACCTAACCTGTGTTTTCTGTTGAGCTTGAATTAGAAGGAAAG CTATGCTCGCGCAAAAAGGAAACATGAATCTCCAGAATGAAGCACTACGGAAGTCTGCAAAGCCCTAAGTTGCTG CACATGATTCACTCACCGCCCGCCCTTCCGCCCTGGACATTTTGACGGGTTTTTTGTTGCCTTCCGCGGACCAGC GATTTTATTTGTTGAATCAATCCAGTCCCTTGAGACTGATCATCCACCGCTCCGATTAAGATGAATCATATTTCA CCGGACTGAAAAACACTATCCTTCAACGAGCTCCAATGGCCCAGTTCGTTCCGCGCAATGTATTCCCTCATTATG GGGCTATTCCACGGTCCTATTTCTTAGGACACCACAGGGCTGGTCTGACCAAGATGAAAAGCATGCTCTCAACTA TCGACTATGTTGTCGAGTGTCGTGATTATCGAGCTCCCGTGACCTCGATCAACCCCATGTTTGAGGAAGCTTTGG GCAAGATGCGACGACTGGTCGTCTACACTAAGAGAGATCTGGGAAGCACTCCCAGATCATCTGCCCAGAAAATAG TAAGTATTTTCTTCTTGGCTATGCAGTGAGATAACAGACCACTGCTGGATATCAGCTAAAAGTGCTGTAGATAGA ACGCAAACTGCAAGGTTTTGATCCAAAGAGCGCCGTGTTTTTCACCAGCTCGTCCTCCCGGCAAGATGTCAGCCA GATCATCAAGCACCTTCGAACCGACGCCGAAGCTCCCGATAAGTTAGTAGGCTGTCGAGTGTTAGTTGTCGGAAT GCCCAATGTTGGCAAGTCAACACTGATCAACAATCTACGCAACTCAGGCACGGGCAAAGCCAAGGCTATGAAAAC CGGGCAGCAACCCGGTATCACACGCAAGGTAGCCACGCAGGTGAAGATCATTGATCGTGAGAACGGATCACATGT CTACGTTCTGGACACGCCGGGAGTGTTTATGCCATATGTTCCAGAAGCAGAGAATATGCTCAAGCTGGCTCTCTG TGGCTGTGTCAAGGACAATGTCATTTCCGCGATAACCATGGCGGATTACTTGTTGTATCATATAAACCTGAATGA TCCATCAGTATACAAGCGCTGGTCGGAACCGACCAATGATGTGGTTCCATTAATTGAAAGCTTTGCGCGCCAAAC TGGCCTGCTCGCAAAAGGCGGGGTGCCAATGATGGATGGAGCCGCACTTCTTTTTATACAGAAATGGAGACAAGG AGAGCTAGGTCAATTTTTGGTGGACGACCTAGAAGCAGAGGAACAACGGCGGGGAGATCCTACGCAAACACCGCG CATGAGCATGACGCAGGCCTTGAGAGTGGAAAGGACAACTCGAAAGAACAAACCGGATGCAACAACGAGCGATCT GTAA |