Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5382.t1
Gene name
Locationscaffold_12:630777..631737
Strand+
Gene length (bp)960
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 2.7E-09 21 98
PF00153 Mito_carr Mitochondrial carrier protein 6.7E-05 112 198
PF00153 Mito_carr Mitochondrial carrier protein 2.3E-14 216 315

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 67 89 22
2 169 191 22
3 215 237 22
4 282 304 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5382.t1
MSTFNGLEITTASRPIPPYQASIVAALASEGAIHPIDTVITRMQSPMYSSVYKHLNGTLSRALFSGLYQGFGPTF
FAGTLSSAAFFTAYEASKTAFSNAQAAGYMLGVPRPLIHVASSAVAELLACAIQNPAEVLKQNAQVFQRPVNADR
GPSPTMEMLRRFRKYPAGLWAGYSTLVASQLPGMCVTFCLYEMFKEDLLERWKTGKDDIRQQLEATVLGAGAAGG
CASWLFVPINVVKTRMRLAVGDQIDSTRSGLKGNPGLPSRIGAFAIARDVLRKEGVAGLFRGSALTCVAAIVGSG
LYIGCYEGTKIYLCNYEGS*
Coding >Pro_DTO377G3_2|g5382.t1
ATGTCCACATTCAATGGCTTAGAAATAACAACAGCAAGTCGACCCATCCCACCCTACCAGGCCTCAATAGTCGCC
GCACTAGCGAGCGAAGGAGCCATCCACCCAATAGACACAGTAATAACACGCATGCAATCCCCGATGTACAGCAGC
GTCTACAAGCACCTAAACGGCACACTGAGCCGCGCACTCTTCAGCGGGCTATACCAAGGCTTCGGGCCAACCTTC
TTCGCAGGAACACTCTCATCAGCTGCTTTCTTCACCGCATACGAAGCCTCAAAGACGGCATTTAGCAATGCACAG
GCCGCCGGATATATGCTCGGCGTCCCGCGGCCGCTGATCCACGTTGCTAGTAGTGCTGTTGCCGAACTGCTTGCA
TGCGCTATCCAGAACCCGGCTGAGGTGTTGAAGCAGAATGCTCAGGTTTTTCAGCGGCCAGTCAATGCAGACAGG
GGCCCGTCTCCGACGATGGAGATGTTGCGAAGGTTTCGGAAATATCCGGCTGGGTTGTGGGCCGGGTATAGTACG
TTAGTGGCGAGTCAATTGCCGGGGATGTGTGTTACGTTCTGTTTGTATGAGATGTTCAAGGAGGATTTGCTTGAG
CGGTGGAAGACGGGGAAAGATGATATTAGACAGCAGCTTGAAGCGACTGTTTTGGGTGCTGGTGCTGCTGGAGGT
TGCGCGTCTTGGTTGTTTGTTCCTATCAATGTGGTTAAGACGAGGATGAGGCTTGCGGTTGGTGATCAGATAGAT
AGCACTCGGTCAGGTCTCAAGGGAAACCCTGGCTTGCCATCCCGTATCGGGGCATTTGCTATTGCTCGAGATGTG
CTGCGGAAGGAGGGTGTAGCTGGGTTATTTCGGGGGTCTGCTTTGACCTGCGTGGCAGCGATTGTGGGGAGTGGA
CTTTATATTGGGTGTTATGAGGGGACGAAGATATACTTGTGCAATTATGAAGGCTCATAG
Transcript >Pro_DTO377G3_2|g5382.t1
ATGTCCACATTCAATGGCTTAGAAATAACAACAGCAAGTCGACCCATCCCACCCTACCAGGCCTCAATAGTCGCC
GCACTAGCGAGCGAAGGAGCCATCCACCCAATAGACACAGTAATAACACGCATGCAATCCCCGATGTACAGCAGC
GTCTACAAGCACCTAAACGGCACACTGAGCCGCGCACTCTTCAGCGGGCTATACCAAGGCTTCGGGCCAACCTTC
TTCGCAGGAACACTCTCATCAGCTGCTTTCTTCACCGCATACGAAGCCTCAAAGACGGCATTTAGCAATGCACAG
GCCGCCGGATATATGCTCGGCGTCCCGCGGCCGCTGATCCACGTTGCTAGTAGTGCTGTTGCCGAACTGCTTGCA
TGCGCTATCCAGAACCCGGCTGAGGTGTTGAAGCAGAATGCTCAGGTTTTTCAGCGGCCAGTCAATGCAGACAGG
GGCCCGTCTCCGACGATGGAGATGTTGCGAAGGTTTCGGAAATATCCGGCTGGGTTGTGGGCCGGGTATAGTACG
TTAGTGGCGAGTCAATTGCCGGGGATGTGTGTTACGTTCTGTTTGTATGAGATGTTCAAGGAGGATTTGCTTGAG
CGGTGGAAGACGGGGAAAGATGATATTAGACAGCAGCTTGAAGCGACTGTTTTGGGTGCTGGTGCTGCTGGAGGT
TGCGCGTCTTGGTTGTTTGTTCCTATCAATGTGGTTAAGACGAGGATGAGGCTTGCGGTTGGTGATCAGATAGAT
AGCACTCGGTCAGGTCTCAAGGGAAACCCTGGCTTGCCATCCCGTATCGGGGCATTTGCTATTGCTCGAGATGTG
CTGCGGAAGGAGGGTGTAGCTGGGTTATTTCGGGGGTCTGCTTTGACCTGCGTGGCAGCGATTGTGGGGAGTGGA
CTTTATATTGGGTGTTATGAGGGGACGAAGATATACTTGTGCAATTATGAAGGCTCATAG
Gene >Pro_DTO377G3_2|g5382.t1
ATGTCCACATTCAATGGCTTAGAAATAACAACAGCAAGTCGACCCATCCCACCCTACCAGGCCTCAATAGTCGCC
GCACTAGCGAGCGAAGGAGCCATCCACCCAATAGACACAGTAATAACACGCATGCAATCCCCGATGTACAGCAGC
GTCTACAAGCACCTAAACGGCACACTGAGCCGCGCACTCTTCAGCGGGCTATACCAAGGCTTCGGGCCAACCTTC
TTCGCAGGAACACTCTCATCAGCTGCTTTCTTCACCGCATACGAAGCCTCAAAGACGGCATTTAGCAATGCACAG
GCCGCCGGATATATGCTCGGCGTCCCGCGGCCGCTGATCCACGTTGCTAGTAGTGCTGTTGCCGAACTGCTTGCA
TGCGCTATCCAGAACCCGGCTGAGGTGTTGAAGCAGAATGCTCAGGTTTTTCAGCGGCCAGTCAATGCAGACAGG
GGCCCGTCTCCGACGATGGAGATGTTGCGAAGGTTTCGGAAATATCCGGCTGGGTTGTGGGCCGGGTATAGTACG
TTAGTGGCGAGTCAATTGCCGGGGATGTGTGTTACGTTCTGTTTGTATGAGATGTTCAAGGAGGATTTGCTTGAG
CGGTGGAAGACGGGGAAAGATGATATTAGACAGCAGCTTGAAGCGACTGTTTTGGGTGCTGGTGCTGCTGGAGGT
TGCGCGTCTTGGTTGTTTGTTCCTATCAATGTGGTTAAGACGAGGATGAGGCTTGCGGTTGGTGATCAGATAGAT
AGCACTCGGTCAGGTCTCAAGGGAAACCCTGGCTTGCCATCCCGTATCGGGGCATTTGCTATTGCTCGAGATGTG
CTGCGGAAGGAGGGTGTAGCTGGGTTATTTCGGGGGTCTGCTTTGACCTGCGTGGCAGCGATTGTGGGGAGTGGA
CTTTATATTGGGTGTTATGAGGGGACGAAGATATACTTGTGCAATTATGAAGGCTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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