Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5374.t1
Gene name
Locationscaffold_12:616903..618006
Strand-
Gene length (bp)1103
Transcript length (bp)966
Coding sequence length (bp)966
Protein length (aa) 322

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 76 98 22
3 108 130 22
4 169 191 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5374.t1
MQFLFPKKHKHHKLVLWLMTGEFPITIVMLTLTGIASHNLYQTLLWQDGADNGFNSAPNEALYAAANYTPFKAPM
VWSSFITSYNLVLAVLSTFFLITKLPTHWMNLFYPPVAVAVHVSLVALYIVSAVYQAGSDMSDPRHPQPGAPWYI
AKSCSVAYKKSNIGYCMQAKALFAVTVIMVVYYVIILGFCIHSCFITPEERDAILEQREERRIEKEFEEEIIKSP
SMIPMTPGPMPRSGMVPRTPGVPPMAVGGNISPFAPRTLAFNRLGNGSTASDLPLRDNSRMPQPQYPSPQSYEVS
PESSAGSPMYFPPPPKKAARA*
Coding >Pro_DTO377G3_2|g5374.t1
ATGCAGTTCTTGTTTCCAAAGAAGCATAAGCACCACAAGCTCGTGCTTTGGTTGATGACTGGGGAGTTTCCGATC
ACCATCGTAATGCTGACATTGACTGGTATCGCTTCCCATAATCTATACCAGACATTATTATGGCAAGATGGAGCA
GACAATGGATTCAACAGTGCTCCCAACGAGGCATTGTATGCTGCAGCGAACTACACACCATTCAAGGCCCCCATG
GTTTGGTCCAGCTTTATCACCAGTTACAATCTTGTCCTTGCTGTTTTAAGCACTTTCTTCCTCATCACAAAATTG
CCTACCCACTGGATGAACCTGTTTTATCCTCCTGTTGCGGTCGCCGTCCACGTGTCCTTGGTCGCTCTCTATATC
GTGTCAGCGGTGTATCAGGCTGGGTCTGACATGTCAGACCCCAGACATCCTCAGCCAGGGGCCCCGTGGTACATT
GCGAAAAGTTGCAGTGTCGCCTACAAAAAGTCCAACATTGGATACTGCATGCAAGCGAAAGCACTGTTTGCTGTG
ACTGTTATCATGGTTGTCTACTATGTAATTATCCTCGGCTTCTGTATCCACTCCTGCTTCATCACCCCCGAAGAA
CGGGATGCGATCCTGGAGCAGAGGGAAGAGCGTCGCATCGAGAAGGAGTTCGAAGAAGAGATCATCAAGTCTCCC
AGCATGATTCCTATGACCCCCGGCCCAATGCCGCGATCAGGTATGGTTCCCCGTACCCCCGGGGTTCCGCCCATG
GCTGTTGGAGGAAATATCTCGCCCTTCGCACCCCGAACGCTGGCCTTCAACCGACTTGGCAATGGTAGTACCGCA
TCGGACCTCCCACTGCGGGACAACTCCCGTATGCCTCAGCCTCAATACCCGTCGCCGCAATCGTATGAAGTCAGT
CCGGAGAGTTCGGCAGGGTCGCCGATGTACTTCCCGCCGCCGCCAAAGAAGGCTGCTAGGGCCTAA
Transcript >Pro_DTO377G3_2|g5374.t1
ATGCAGTTCTTGTTTCCAAAGAAGCATAAGCACCACAAGCTCGTGCTTTGGTTGATGACTGGGGAGTTTCCGATC
ACCATCGTAATGCTGACATTGACTGGTATCGCTTCCCATAATCTATACCAGACATTATTATGGCAAGATGGAGCA
GACAATGGATTCAACAGTGCTCCCAACGAGGCATTGTATGCTGCAGCGAACTACACACCATTCAAGGCCCCCATG
GTTTGGTCCAGCTTTATCACCAGTTACAATCTTGTCCTTGCTGTTTTAAGCACTTTCTTCCTCATCACAAAATTG
CCTACCCACTGGATGAACCTGTTTTATCCTCCTGTTGCGGTCGCCGTCCACGTGTCCTTGGTCGCTCTCTATATC
GTGTCAGCGGTGTATCAGGCTGGGTCTGACATGTCAGACCCCAGACATCCTCAGCCAGGGGCCCCGTGGTACATT
GCGAAAAGTTGCAGTGTCGCCTACAAAAAGTCCAACATTGGATACTGCATGCAAGCGAAAGCACTGTTTGCTGTG
ACTGTTATCATGGTTGTCTACTATGTAATTATCCTCGGCTTCTGTATCCACTCCTGCTTCATCACCCCCGAAGAA
CGGGATGCGATCCTGGAGCAGAGGGAAGAGCGTCGCATCGAGAAGGAGTTCGAAGAAGAGATCATCAAGTCTCCC
AGCATGATTCCTATGACCCCCGGCCCAATGCCGCGATCAGGTATGGTTCCCCGTACCCCCGGGGTTCCGCCCATG
GCTGTTGGAGGAAATATCTCGCCCTTCGCACCCCGAACGCTGGCCTTCAACCGACTTGGCAATGGTAGTACCGCA
TCGGACCTCCCACTGCGGGACAACTCCCGTATGCCTCAGCCTCAATACCCGTCGCCGCAATCGTATGAAGTCAGT
CCGGAGAGTTCGGCAGGGTCGCCGATGTACTTCCCGCCGCCGCCAAAGAAGGCTGCTAGGGCCTAA
Gene >Pro_DTO377G3_2|g5374.t1
ATGCAGTTCTTGTTTCCAAAGAAGCATAAGCACCACAAGCTCGTGCTTTGGTTGATGACTGGGGAGTTTCCGATC
ACCATCGTAATGCTGACATTGACTGGTATCGCTTCCCATAATCTATACCAGACATTATTATGGCAAGATGGAGCA
GACAATGGATTCAACAGTGCTCCCAACGAGGCATTGTATGCTGCAGCGAACTACACACCATTCAAGGCCCCCATG
GTTTGGTCCAGCTTGTAAGTTACTCATTATACTCATACTCAATATGCAAGAGGTGGCCGCTGACTTAAAAACAGT
ATCACCAGTTACAATCTTGTCCTTGCTGTTTTAAGCACTTTCTTCCTCATCACAAAATTGCCTACCCACTGGATG
AACCTGTTTTATCCTCCTGTTGCGGTCGCCGTCCACGTGTCCTTGGTCGCTCTCTATATCGTGTCAGCGGTGTAT
CAGGCTGGGTCTGACATGTCAGACCCCAGACATCCTCAGCCAGGGGCCCCGTGGTACATTGCGAAAAGTTGCAGT
GTCGCCTACAAAAAGTCCAACATTGGATACTGCATGCAAGCGAAAGCACTGTTTGCTGTGACTGTTATCATGGTG
TTAGTTCGGCCCTTTCCACTCTAATATTTGTTTACTCCCCTTCTACGAGGAAACAGTTAGCTAACATCCCCTTCA
GTGTCTACTATGTAATTATCCTCGGCTTCTGTATCCACTCCTGCTTCATCACCCCCGAAGAACGGGATGCGATCC
TGGAGCAGAGGGAAGAGCGTCGCATCGAGAAGGAGTTCGAAGAAGAGATCATCAAGTCTCCCAGCATGATTCCTA
TGACCCCCGGCCCAATGCCGCGATCAGGTATGGTTCCCCGTACCCCCGGGGTTCCGCCCATGGCTGTTGGAGGAA
ATATCTCGCCCTTCGCACCCCGAACGCTGGCCTTCAACCGACTTGGCAATGGTAGTACCGCATCGGACCTCCCAC
TGCGGGACAACTCCCGTATGCCTCAGCCTCAATACCCGTCGCCGCAATCGTATGAAGTCAGTCCGGAGAGTTCGG
CAGGGTCGCCGATGTACTTCCCGCCGCCGCCAAAGAAGGCTGCTAGGGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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