Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g5373.t1
Gene name
Location	scaffold_12:615098..616371
Strand	+
Gene length (bp)	1273
Transcript length (bp)	1179
Coding sequence length (bp)	1179
Protein length (aa)	393

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00320	GATA	GATA zinc finger	2.8E-15	352	386
PF08447	PAS_3	PAS fold	1.8E-09	86	163
PF08448	PAS_4	PAS fold	7.5E-06	69	161
PF00989	PAS	PAS fold	9.5E-06	66	163

GO

GO Term	Description	Terminal node
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0043565	sequence-specific DNA binding	Yes
GO:0005515	protein binding	Yes
GO:0031323	regulation of cellular metabolic process	No
GO:1903506	regulation of nucleic acid-templated transcription	No
GO:0051252	regulation of RNA metabolic process	No
GO:0008150	biological_process	No
GO:0060255	regulation of macromolecule metabolic process	No
GO:0003677	DNA binding	No
GO:0003676	nucleic acid binding	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0010468	regulation of gene expression	No
GO:0050789	regulation of biological process	No
GO:0005488	binding	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:0065007	biological regulation	No
GO:0003674	molecular_function	No
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:0019222	regulation of metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0031326	regulation of cellular biosynthetic process	No
GO:0080090	regulation of primary metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0009889	regulation of biosynthetic process	No
GO:0050794	regulation of cellular process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
GATA type zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5373.t1 MALSRPQPYEGMPLPNYQMRSGSNEGHPGYTMEQQHVHASYGGLYGVQGAHHGGYQGVQNDGGWTERVLDEMKDL LLLLTPHGQITYASPSCKSITGRVAKQLEGSALAHYIHQDDQPIFQRDLDESVVANQSFRTHLRFHKTNGTYCLM EAYGHPHLANQDERAGRPTPANGRCTGFFLVCRPYPSKVSQLLDSFLEHKIENARLVQQIAKLKQEEDEEATATR VPYSRSDQDIRAPVAENRFQRFAHSGEISSDPDTTDTVGPNSDESDTSQSTGYFAEPNTREVYSHIDGIEVMTGL NYADGERSHGLSTGVNRGRLIHCDIDITTAADQERNAQEGDRRKRLKAQHVCSDCGTADSPEWRKGPNGPKTLCN ACGLRWSKKEKKRQESA*
Coding	>Pro_DTO377G3_2\|g5373.t1 ATGGCTCTGAGTCGCCCACAACCCTATGAGGGTATGCCTCTACCCAACTACCAGATGAGATCGGGCTCCAACGAG GGGCATCCGGGGTACACAATGGAGCAGCAGCACGTCCATGCATCCTACGGTGGGCTCTATGGGGTGCAAGGTGCT CATCACGGGGGATACCAGGGTGTACAAAACGACGGGGGCTGGACAGAACGAGTTCTCGATGAAATGAAGGACCTG CTACTTCTCCTCACACCCCACGGCCAAATCACCTATGCCTCACCATCGTGCAAGAGTATCACCGGCCGTGTCGCA AAACAACTCGAGGGAAGTGCTCTGGCACATTACATTCATCAGGACGACCAGCCAATCTTCCAGCGAGATTTGGAC GAATCGGTGGTTGCGAACCAATCGTTCCGGACCCATTTACGATTCCACAAGACCAACGGCACATATTGTCTCATG GAGGCCTATGGACACCCACATCTCGCAAACCAGGATGAGCGTGCAGGGAGACCCACGCCGGCCAACGGGCGCTGC ACCGGATTTTTCCTCGTGTGCCGACCATATCCCAGCAAGGTCTCTCAATTGCTCGACTCTTTTTTGGAACACAAG ATTGAGAACGCACGTCTAGTCCAACAGATTGCCAAATTGAAGCAAGAAGAAGATGAAGAGGCGACCGCGACTCGA GTGCCCTATTCTAGGAGCGACCAGGATATTCGTGCCCCCGTGGCCGAAAACCGATTCCAACGATTCGCTCATTCG GGGGAAATTTCTAGTGACCCTGATACTACAGACACCGTAGGGCCGAACTCGGATGAATCCGACACGAGCCAATCG ACGGGCTATTTCGCAGAGCCCAATACCCGCGAAGTTTACTCACATATTGACGGCATCGAAGTCATGACCGGTCTT AACTACGCAGACGGCGAGAGATCGCACGGTCTCAGTACAGGTGTTAACCGTGGCCGTCTTATACATTGCGATATT GACATCACCACTGCTGCTGACCAAGAGCGCAACGCTCAGGAAGGCGACCGCCGTAAAAGGCTCAAGGCCCAGCAT GTCTGTAGCGACTGTGGAACAGCAGACTCGCCAGAATGGAGAAAGGGGCCCAACGGGCCTAAGACCTTGTGCAAT GCTTGTGGCTTGCGCTGGTCTAAGAAGGAGAAGAAACGCCAAGAGTCGGCCTAA
Transcript	>Pro_DTO377G3_2\|g5373.t1 ATGGCTCTGAGTCGCCCACAACCCTATGAGGGTATGCCTCTACCCAACTACCAGATGAGATCGGGCTCCAACGAG GGGCATCCGGGGTACACAATGGAGCAGCAGCACGTCCATGCATCCTACGGTGGGCTCTATGGGGTGCAAGGTGCT CATCACGGGGGATACCAGGGTGTACAAAACGACGGGGGCTGGACAGAACGAGTTCTCGATGAAATGAAGGACCTG CTACTTCTCCTCACACCCCACGGCCAAATCACCTATGCCTCACCATCGTGCAAGAGTATCACCGGCCGTGTCGCA AAACAACTCGAGGGAAGTGCTCTGGCACATTACATTCATCAGGACGACCAGCCAATCTTCCAGCGAGATTTGGAC GAATCGGTGGTTGCGAACCAATCGTTCCGGACCCATTTACGATTCCACAAGACCAACGGCACATATTGTCTCATG GAGGCCTATGGACACCCACATCTCGCAAACCAGGATGAGCGTGCAGGGAGACCCACGCCGGCCAACGGGCGCTGC ACCGGATTTTTCCTCGTGTGCCGACCATATCCCAGCAAGGTCTCTCAATTGCTCGACTCTTTTTTGGAACACAAG ATTGAGAACGCACGTCTAGTCCAACAGATTGCCAAATTGAAGCAAGAAGAAGATGAAGAGGCGACCGCGACTCGA GTGCCCTATTCTAGGAGCGACCAGGATATTCGTGCCCCCGTGGCCGAAAACCGATTCCAACGATTCGCTCATTCG GGGGAAATTTCTAGTGACCCTGATACTACAGACACCGTAGGGCCGAACTCGGATGAATCCGACACGAGCCAATCG ACGGGCTATTTCGCAGAGCCCAATACCCGCGAAGTTTACTCACATATTGACGGCATCGAAGTCATGACCGGTCTT AACTACGCAGACGGCGAGAGATCGCACGGTCTCAGTACAGGTGTTAACCGTGGCCGTCTTATACATTGCGATATT GACATCACCACTGCTGCTGACCAAGAGCGCAACGCTCAGGAAGGCGACCGCCGTAAAAGGCTCAAGGCCCAGCAT GTCTGTAGCGACTGTGGAACAGCAGACTCGCCAGAATGGAGAAAGGGGCCCAACGGGCCTAAGACCTTGTGCAAT GCTTGTGGCTTGCGCTGGTCTAAGAAGGAGAAGAAACGCCAAGAGTCGGCCTAA
Gene	>Pro_DTO377G3_2\|g5373.t1 ATGGCTCTGAGTCGCCCACAACCCTATGAGGGTATGCCTCTACCCAACTACCAGATGAGATCGGGCTCCAACGAG GGGCATCCGGGGTACACAATGGAGCAGCAGCACGTCCATGCATCCTACGGTGGGCTCTATGGGGTGCAAGGTGCT CATCACGGGGGATACCAGGGTGTACAAAACGACGGGGGCTGGACAGAACGAGTTCTCGATGAAATGAAGGACCTG CTACTTCTCCTCACACCCCACGGCCAAATCACCTATGCCTCACCATCGTGCAAGAGTATCACCGGCCGTGTCGCA AAACAACTCGAGGGAAGTGCTCTGGCACATTACATTCATCAGGACGACCAGCCAATCTTCCAGCGAGATTTGGAC GAATCGGTGGTTGCGAACCAATCGTTCCGGACCCATTTACGATTCCACAAGACCAACGGCACATATTGTCTCATG GAGGCCTATGGACACCCACATCTCGCAAACCAGGATGAGCGTGCAGGGAGACCCACGCCGGCCAACGGGCGCTGC ACCGGATTTTTCCTCGTGTGCCGACCATATCCCAGCAAGGTCTCTCAATTGCTCGACTCTTTTTTGGAACACAAG ATTGAGAACGCACGTCTAGTCCAACAGATTGCCAAATTGAAGCAAGAAGAAGATGAAGAGGCGACCGCGACTCGA GTGCCCTATTCTAGGAGCGACCAGGATATTCGTGCCCCCGTGGCCGAAAACCGATTCCAACGATTCGCTCATTCG GGGGAAATTTCTAGTGACCCTGATACTACAGACACCGTAGGGCCGAACTCGGATGAATCCGACACGAGCCAATCG ACGGGCTATTTCGCAGAGCCCAATACCCGCGAAGTTTACTCACATATTGACGGCATCGAAGTCATGACCGGTCTT AACTACGCAGACGGCGAGAGATCGCACGGTCTCAGTACAGGTGTTAACCGTGGCCGTCTTATACATTGCGATATT GACATCACCACTGCTGCTGACCAAGAGCGCAACGCTCAGGAAGGCGACCGCCGTAAAAGGCTCAAGGCCCAGCAT GTCTGTAGCGACTGTGGAACAGCAGACTCGCCAGAATGGAGAAAGGGGCCCAACGGGCCTAAGACCTTGTGCAAT GCTTGTGGCTGTAAGTATTGTCCCGTCTGTTGTGACCCCCGCTCAGCTTGCTTGTAACCTGTCTACTCTTGGCAC GGAACGAGCTAACCCAATTGTCTTTCTAGTGCGCTGGTCTAAGAAGGAGAAGAAACGCCAAGAGTCGGCCTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences