Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5352.t1
Gene name
Locationscaffold_12:553584..554542
Strand-
Gene length (bp)958
Transcript length (bp)705
Coding sequence length (bp)705
Protein length (aa) 235

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00926 DHBP_synthase 3,4-dihydroxy-2-butanone 4-phosphate synthase 1.1E-78 15 219

GO

GO Term Description Terminal node
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity Yes
GO:0009231 riboflavin biosynthetic process Yes
GO:0071704 organic substance metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0042727 flavin-containing compound biosynthetic process No
GO:0009058 biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0006766 vitamin metabolic process No
GO:0008152 metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0008150 biological_process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0009110 vitamin biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0003824 catalytic activity No
GO:0006767 water-soluble vitamin metabolic process No
GO:0003674 molecular_function No
GO:0044281 small molecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0006771 riboflavin metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0044283 small molecule biosynthetic process No
GO:0042726 flavin-containing compound metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0042364 water-soluble vitamin biosynthetic process No
GO:0016829 lyase activity No
GO:0016830 carbon-carbon lyase activity No
GO:0044237 cellular metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009987 cellular process No
GO:1901576 organic substance biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5352.t1
MPSPTEIAHQFDSIEDSIAAFKNGEFIIVLDSQDRENEGDLIVAAESITAAQMAFLVRYSSGLICAPITPDLATR
LALPQMVTENADPKCTAYTVTIDSSDESVTTGISAGDRALTCRTLASPTAQVDSFRRPGHIIPLQARPGGVRERT
GHTEAAVEFCKLAGKAPAGVIAELVEDGETVEGVAEIGGNNGMMRRDGCLRFGKKWGIKVCTIEDLVVYLDRRDG
TGAAANGKQ*
Coding >Pro_DTO377G3_2|g5352.t1
ATGCCTTCACCAACAGAAATCGCACACCAATTCGACTCGATTGAGGACTCAATTGCAGCATTTAAGAATGGCGAA
TTCATCATTGTGCTCGATTCGCAAGATCGTGAAAACGAGGGCGACCTAATTGTTGCCGCCGAGTCCATCACAGCC
GCCCAGATGGCCTTCCTGGTGCGCTATTCGAGCGGTTTAATATGCGCCCCGATCACCCCGGACCTCGCCACCCGC
CTCGCGCTCCCACAAATGGTAACCGAGAACGCCGACCCGAAGTGCACCGCGTACACAGTCACGATCGACTCGAGC
GACGAATCCGTGACGACAGGAATCTCCGCCGGGGACCGCGCACTGACGTGCCGCACGCTCGCCTCGCCCACGGCA
CAGGTCGACTCCTTCCGCCGGCCAGGCCATATCATCCCGCTGCAGGCGCGTCCGGGCGGCGTGCGCGAGCGCACG
GGTCACACCGAGGCCGCGGTGGAGTTCTGCAAGCTTGCTGGTAAGGCGCCGGCTGGTGTTATTGCCGAGCTTGTT
GAGGACGGGGAGACTGTCGAGGGCGTCGCGGAGATTGGGGGGAATAATGGCATGATGCGTCGGGATGGATGCTTG
CGATTTGGAAAGAAGTGGGGGATTAAGGTGTGTACTATTGAGGATTTGGTGGTGTACTTGGATCGTCGTGACGGT
ACTGGTGCCGCTGCGAATGGGAAGCAATGA
Transcript >Pro_DTO377G3_2|g5352.t1
ATGCCTTCACCAACAGAAATCGCACACCAATTCGACTCGATTGAGGACTCAATTGCAGCATTTAAGAATGGCGAA
TTCATCATTGTGCTCGATTCGCAAGATCGTGAAAACGAGGGCGACCTAATTGTTGCCGCCGAGTCCATCACAGCC
GCCCAGATGGCCTTCCTGGTGCGCTATTCGAGCGGTTTAATATGCGCCCCGATCACCCCGGACCTCGCCACCCGC
CTCGCGCTCCCACAAATGGTAACCGAGAACGCCGACCCGAAGTGCACCGCGTACACAGTCACGATCGACTCGAGC
GACGAATCCGTGACGACAGGAATCTCCGCCGGGGACCGCGCACTGACGTGCCGCACGCTCGCCTCGCCCACGGCA
CAGGTCGACTCCTTCCGCCGGCCAGGCCATATCATCCCGCTGCAGGCGCGTCCGGGCGGCGTGCGCGAGCGCACG
GGTCACACCGAGGCCGCGGTGGAGTTCTGCAAGCTTGCTGGTAAGGCGCCGGCTGGTGTTATTGCCGAGCTTGTT
GAGGACGGGGAGACTGTCGAGGGCGTCGCGGAGATTGGGGGGAATAATGGCATGATGCGTCGGGATGGATGCTTG
CGATTTGGAAAGAAGTGGGGGATTAAGGTGTGTACTATTGAGGATTTGGTGGTGTACTTGGATCGTCGTGACGGT
ACTGGTGCCGCTGCGAATGGGAAGCAATGA
Gene >Pro_DTO377G3_2|g5352.t1
ATGCCTTCACCAACAGAAATCGCACACCAATTCGACTCGATTGAGGACTCAATTGCAGCATTTAGTAAGTGAACT
CTTTACAGAGAAACCGATTTCACCACAACGAGCATGCACAACGAGCATGCAGTACTCGTGGCGCCTTCCGACTAG
ACCAAATAACGACCAAACGACTAACGGAGCCCTACACTAGAGAATGGCGAATTCATCATTGTGCTCGATTCGCAA
GATCGTGAAAACGAGGGCGACCTAATTGTTGCCGCCGAGTCCATCACAGCCGCCCAGATGGCCTTCCTGGTGCGC
TATTCGAGGTACGAAACCCACCCGATCAAGACAGCGACGAAACCCGTCTTCCCTCCCCGCAATAGCGCACCCTCA
AAGACAAACGCGCAAACTTGAAGCCACCCCAAAAACCTTGCTGACAATTCTAAAACACAGCGGTTTAATATGCGC
CCCGATCACCCCGGACCTCGCCACCCGCCTCGCGCTCCCACAAATGGTAACCGAGAACGCCGACCCGAAGTGCAC
CGCGTACACAGTCACGATCGACTCGAGCGACGAATCCGTGACGACAGGAATCTCCGCCGGGGACCGCGCACTGAC
GTGCCGCACGCTCGCCTCGCCCACGGCACAGGTCGACTCCTTCCGCCGGCCAGGCCATATCATCCCGCTGCAGGC
GCGTCCGGGCGGCGTGCGCGAGCGCACGGGTCACACCGAGGCCGCGGTGGAGTTCTGCAAGCTTGCTGGTAAGGC
GCCGGCTGGTGTTATTGCCGAGCTTGTTGAGGACGGGGAGACTGTCGAGGGCGTCGCGGAGATTGGGGGGAATAA
TGGCATGATGCGTCGGGATGGATGCTTGCGATTTGGAAAGAAGTGGGGGATTAAGGTGTGTACTATTGAGGATTT
GGTGGTGTACTTGGATCGTCGTGACGGTACTGGTGCCGCTGCGAATGGGAAGCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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