Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5335.t1
Gene name
Locationscaffold_12:503432..504560
Strand-
Gene length (bp)1128
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01248 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 2.9E-23 126 216

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5335.t1
MVPPTKSGKKTAALPYPQGKAGAGKKAAKNPLIEKRTRNFGIGQDIQPRRDLSRFVKWPEYVRLQRQKKILNMRL
KVPPSIAQFQATLDRNTAAQTFKLLSKYRPETKAEKKERLVQEATAVADGKKKEDVSKKPYHVKYGLNHVVGLVE
NKKASLVLIAHDVDPIELVVFLPALCRKMGVPYAIVKGKARLGTVVHKKTSAVLALTETRAEDKAEFAKLLSAIK
EGYTDKHEDSRRHWGGGIMGAKANARIEKKRKALDAAIKV*
Coding >Pro_DTO377G3_2|g5335.t1
ATGGTGCCTCCTACTAAGTCCGGAAAGAAGACCGCCGCTCTGCCCTACCCCCAGGGCAAGGCTGGCGCTGGCAAG
AAGGCTGCCAAGAACCCCCTTATCGAGAAGCGCACTCGCAACTTCGGTATCGGCCAGGACATCCAGCCCCGTCGC
GACCTCTCCCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTTCAGCGCCAGAAGAAGATCCTGAACATGCGCCTG
AAGGTTCCTCCTTCCATCGCTCAGTTCCAGGCCACTCTCGACCGCAACACCGCTGCCCAGACCTTCAAGCTCCTC
TCCAAGTACCGTCCTGAGACCAAGGCCGAGAAGAAGGAGCGTCTCGTCCAGGAGGCCACCGCCGTCGCCGACGGC
AAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACCACGTCAAGTACGGTCTCAACCACGTCGTCGGACTCGTTGAG
AACAAGAAGGCTTCCCTCGTTCTCATCGCCCACGATGTTGACCCCATTGAGTTGGTTGTCTTCCTGCCCGCTCTC
TGCCGCAAGATGGGTGTCCCCTACGCCATTGTCAAGGGCAAGGCCCGTCTCGGCACAGTCGTCCACAAGAAGACC
TCCGCCGTTCTCGCCCTGACCGAGACCCGCGCTGAGGACAAGGCCGAGTTCGCCAAGCTCCTCTCCGCCATCAAG
GAGGGTTACACCGACAAGCACGAGGACTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCCAACGCC
CGCATCGAGAAGAAGCGTAAGGCTCTCGATGCCGCCATCAAGGTTTAA
Transcript >Pro_DTO377G3_2|g5335.t1
ATGGTGCCTCCTACTAAGTCCGGAAAGAAGACCGCCGCTCTGCCCTACCCCCAGGGCAAGGCTGGCGCTGGCAAG
AAGGCTGCCAAGAACCCCCTTATCGAGAAGCGCACTCGCAACTTCGGTATCGGCCAGGACATCCAGCCCCGTCGC
GACCTCTCCCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTTCAGCGCCAGAAGAAGATCCTGAACATGCGCCTG
AAGGTTCCTCCTTCCATCGCTCAGTTCCAGGCCACTCTCGACCGCAACACCGCTGCCCAGACCTTCAAGCTCCTC
TCCAAGTACCGTCCTGAGACCAAGGCCGAGAAGAAGGAGCGTCTCGTCCAGGAGGCCACCGCCGTCGCCGACGGC
AAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACCACGTCAAGTACGGTCTCAACCACGTCGTCGGACTCGTTGAG
AACAAGAAGGCTTCCCTCGTTCTCATCGCCCACGATGTTGACCCCATTGAGTTGGTTGTCTTCCTGCCCGCTCTC
TGCCGCAAGATGGGTGTCCCCTACGCCATTGTCAAGGGCAAGGCCCGTCTCGGCACAGTCGTCCACAAGAAGACC
TCCGCCGTTCTCGCCCTGACCGAGACCCGCGCTGAGGACAAGGCCGAGTTCGCCAAGCTCCTCTCCGCCATCAAG
GAGGGTTACACCGACAAGCACGAGGACTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCCAACGCC
CGCATCGAGAAGAAGCGTAAGGCTCTCGATGCCGCCATCAAGGTTTAA
Gene >Pro_DTO377G3_2|g5335.t1
ATGGTGGTGAGTACCCAAATTGTCTCTTGATAACATCAGAGGCTTCTTCTAGTTCTCTCGCGATGTCTCACGATA
TTCGCTTTGCTTCAGATCTCTGATCTAAGCAATTCCGCCGATCGCGCACAGCCTCGAAAGAGATGTGTCGTGCAT
CGTGTGATGATATGGCTGGAAGCATGGAGTCAATGCCCGTAACACGGCTTGGCTCATGTTCTCCTTAGAGTTCAA
AGAAGATGCAGCACTATGTGAACAGCACGCTGATCTTCTTCCTCAATGATAGCCTCCTACTAAGTCCGGAAAGAA
GACCGCCGCTCTGCCCTACCCCCAGGGCAAGGCTGGCGCTGGCAAGAAGGCTGCCAAGGTTAGTTTTCCTTCTTC
CCAGTAGGAGTGCATTGGAAGATGCTAACCTTCCCCCCACAGAACCCCCTTATCGAGAAGCGCACTCGCAACTTC
GGTATCGGCCAGGACATCCAGCCCCGTCGCGACCTCTCCCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTTCAG
CGCCAGAAGAAGATCCTGAACATGCGCCTGAAGGTTCCTCCTTCCATCGCTCAGTTCCAGGCCACTCTCGACCGC
AACACCGCTGCCCAGACCTTCAAGCTCCTCTCCAAGTACCGTCCTGAGACCAAGGCCGAGAAGAAGGAGCGTCTC
GTCCAGGAGGCCACCGCCGTCGCCGACGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACCACGTCAAGTAC
GGTCTCAACCACGTCGTCGGACTCGTTGAGAACAAGAAGGCTTCCCTCGTTCTCATCGCCCACGATGTTGACCCC
ATTGAGTTGGTTGTCTTCCTGCCCGCTCTCTGCCGCAAGATGGGTGTCCCCTACGCCATTGTCAAGGGCAAGGCC
CGTCTCGGCACAGTCGTCCACAAGAAGACCTCCGCCGTTCTCGCCCTGACCGAGACCCGCGCTGAGGACAAGGCC
GAGTTCGCCAAGCTCCTCTCCGCCATCAAGGAGGGTTACACCGACAAGCACGAGGACTCCCGCCGCCACTGGGGT
GGTGGTATCATGGGCGCCAAGGCCAACGCCCGCATCGAGAAGAAGCGTAAGGCTCTCGATGCCGCCATCAAGGTT
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail