Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5335.t1
Gene name
Locationscaffold_12:503432..504560
Strand-
Gene length (bp)1128
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01248 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 2.9E-23 126 216

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5335.t1
MVPPTKSGKKTAALPYPQGKAGAGKKAAKNPLIEKRTRNFGIGQDIQPRRDLSRFVKWPEYVRLQRQKKILNMRL
KVPPSIAQFQATLDRNTAAQTFKLLSKYRPETKAEKKERLVQEATAVADGKKKEDVSKKPYHVKYGLNHVVGLVE
NKKASLVLIAHDVDPIELVVFLPALCRKMGVPYAIVKGKARLGTVVHKKTSAVLALTETRAEDKAEFAKLLSAIK
EGYTDKHEDSRRHWGGGIMGAKANARIEKKRKALDAAIKV*
Coding >Pro_DTO377G3_2|g5335.t1
ATGGTGCCTCCTACTAAGTCCGGAAAGAAGACCGCCGCTCTGCCCTACCCCCAGGGCAAGGCTGGCGCTGGCAAG
AAGGCTGCCAAGAACCCCCTTATCGAGAAGCGCACTCGCAACTTCGGTATCGGCCAGGACATCCAGCCCCGTCGC
GACCTCTCCCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTTCAGCGCCAGAAGAAGATCCTGAACATGCGCCTG
AAGGTTCCTCCTTCCATCGCTCAGTTCCAGGCCACTCTCGACCGCAACACCGCTGCCCAGACCTTCAAGCTCCTC
TCCAAGTACCGTCCTGAGACCAAGGCCGAGAAGAAGGAGCGTCTCGTCCAGGAGGCCACCGCCGTCGCCGACGGC
AAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACCACGTCAAGTACGGTCTCAACCACGTCGTCGGACTCGTTGAG
AACAAGAAGGCTTCCCTCGTTCTCATCGCCCACGATGTTGACCCCATTGAGTTGGTTGTCTTCCTGCCCGCTCTC
TGCCGCAAGATGGGTGTCCCCTACGCCATTGTCAAGGGCAAGGCCCGTCTCGGCACAGTCGTCCACAAGAAGACC
TCCGCCGTTCTCGCCCTGACCGAGACCCGCGCTGAGGACAAGGCCGAGTTCGCCAAGCTCCTCTCCGCCATCAAG
GAGGGTTACACCGACAAGCACGAGGACTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCCAACGCC
CGCATCGAGAAGAAGCGTAAGGCTCTCGATGCCGCCATCAAGGTTTAA
Transcript >Pro_DTO377G3_2|g5335.t1
ATGGTGCCTCCTACTAAGTCCGGAAAGAAGACCGCCGCTCTGCCCTACCCCCAGGGCAAGGCTGGCGCTGGCAAG
AAGGCTGCCAAGAACCCCCTTATCGAGAAGCGCACTCGCAACTTCGGTATCGGCCAGGACATCCAGCCCCGTCGC
GACCTCTCCCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTTCAGCGCCAGAAGAAGATCCTGAACATGCGCCTG
AAGGTTCCTCCTTCCATCGCTCAGTTCCAGGCCACTCTCGACCGCAACACCGCTGCCCAGACCTTCAAGCTCCTC
TCCAAGTACCGTCCTGAGACCAAGGCCGAGAAGAAGGAGCGTCTCGTCCAGGAGGCCACCGCCGTCGCCGACGGC
AAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACCACGTCAAGTACGGTCTCAACCACGTCGTCGGACTCGTTGAG
AACAAGAAGGCTTCCCTCGTTCTCATCGCCCACGATGTTGACCCCATTGAGTTGGTTGTCTTCCTGCCCGCTCTC
TGCCGCAAGATGGGTGTCCCCTACGCCATTGTCAAGGGCAAGGCCCGTCTCGGCACAGTCGTCCACAAGAAGACC
TCCGCCGTTCTCGCCCTGACCGAGACCCGCGCTGAGGACAAGGCCGAGTTCGCCAAGCTCCTCTCCGCCATCAAG
GAGGGTTACACCGACAAGCACGAGGACTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCCAACGCC
CGCATCGAGAAGAAGCGTAAGGCTCTCGATGCCGCCATCAAGGTTTAA
Gene >Pro_DTO377G3_2|g5335.t1
ATGGTGGTGAGTACCCAAATTGTCTCTTGATAACATCAGAGGCTTCTTCTAGTTCTCTCGCGATGTCTCACGATA
TTCGCTTTGCTTCAGATCTCTGATCTAAGCAATTCCGCCGATCGCGCACAGCCTCGAAAGAGATGTGTCGTGCAT
CGTGTGATGATATGGCTGGAAGCATGGAGTCAATGCCCGTAACACGGCTTGGCTCATGTTCTCCTTAGAGTTCAA
AGAAGATGCAGCACTATGTGAACAGCACGCTGATCTTCTTCCTCAATGATAGCCTCCTACTAAGTCCGGAAAGAA
GACCGCCGCTCTGCCCTACCCCCAGGGCAAGGCTGGCGCTGGCAAGAAGGCTGCCAAGGTTAGTTTTCCTTCTTC
CCAGTAGGAGTGCATTGGAAGATGCTAACCTTCCCCCCACAGAACCCCCTTATCGAGAAGCGCACTCGCAACTTC
GGTATCGGCCAGGACATCCAGCCCCGTCGCGACCTCTCCCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTTCAG
CGCCAGAAGAAGATCCTGAACATGCGCCTGAAGGTTCCTCCTTCCATCGCTCAGTTCCAGGCCACTCTCGACCGC
AACACCGCTGCCCAGACCTTCAAGCTCCTCTCCAAGTACCGTCCTGAGACCAAGGCCGAGAAGAAGGAGCGTCTC
GTCCAGGAGGCCACCGCCGTCGCCGACGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACCACGTCAAGTAC
GGTCTCAACCACGTCGTCGGACTCGTTGAGAACAAGAAGGCTTCCCTCGTTCTCATCGCCCACGATGTTGACCCC
ATTGAGTTGGTTGTCTTCCTGCCCGCTCTCTGCCGCAAGATGGGTGTCCCCTACGCCATTGTCAAGGGCAAGGCC
CGTCTCGGCACAGTCGTCCACAAGAAGACCTCCGCCGTTCTCGCCCTGACCGAGACCCGCGCTGAGGACAAGGCC
GAGTTCGCCAAGCTCCTCTCCGCCATCAAGGAGGGTTACACCGACAAGCACGAGGACTCCCGCCGCCACTGGGGT
GGTGGTATCATGGGCGCCAAGGCCAACGCCCGCATCGAGAAGAAGCGTAAGGCTCTCGATGCCGCCATCAAGGTT
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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