Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5332.t1
Gene name
Locationscaffold_12:496601..498099
Strand-
Gene length (bp)1498
Transcript length (bp)1383
Coding sequence length (bp)1383
Protein length (aa) 461

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 5.6E-07 109 143
PF00400 WD40 WD domain, G-beta repeat 7.9E-04 148 187
PF00400 WD40 WD domain, G-beta repeat 1.9E-04 193 238
PF00400 WD40 WD domain, G-beta repeat 2.6E-08 243 280
PF00400 WD40 WD domain, G-beta repeat 2.9E-05 287 343
PF00400 WD40 WD domain, G-beta repeat 2.7E-08 346 384

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5332.t1
MSQLLTTRQAEELHKGMIAYLTSVNLHHSSAALREELGDSIRVDESTLKKYEGLLEKKWTSVVRLQKKIMELEAR
CAALQSELDTATPTSLNRKNQDPVTWLPRAPARHDLQSHRSPVSCLAFHPVFSSLASGSDDTTIKIWDWELGELE
RTIKGHTRAVLDVDYGGPRGGTLLASCSSDLTIKLWDPADEYKNIRTLPGHDHSVSAIRFIPSGAAGSPMSGNLL
VSASRDLTLRIWDVTTGYCVKSMQGHGDWIRDVTPSPDGRFLFSGGDDRVARLWDISSGDTKSTFLGHEHYIECV
AFAPATSYPHFAALAGLKKPPPASSSAEFVATGSRDKTIRLWDTRGNCIKTLVGHDNWVRSLVFHPGGKYLLSVS
DDKTMRCWDLTQECKCVRTIAAHDHFISSLRWAPPLLKDAGAKEGTNGAPAASNGAKEDPNATKMSIRCVLATGS
VDLKVRVWAA*
Coding >Pro_DTO377G3_2|g5332.t1
ATGAGCCAACTTCTCACAACGCGGCAGGCGGAGGAGCTACATAAAGGAATGATCGCCTACCTTACCTCTGTGAAT
TTGCACCACAGCTCCGCCGCTTTACGAGAAGAACTGGGCGACTCGATCAGGGTCGACGAGAGCACACTAAAGAAA
TATGAAGGCCTGTTGGAGAAGAAATGGACGAGTGTAGTCCGGTTACAGAAAAAGATCATGGAACTGGAAGCACGA
TGCGCTGCACTCCAGTCCGAGCTGGATACCGCAACCCCGACTTCGCTGAATCGCAAAAACCAAGACCCCGTTACC
TGGCTGCCTCGAGCACCAGCGCGTCATGACCTCCAATCACACCGCTCGCCAGTATCGTGCCTCGCTTTCCATCCA
GTATTCTCTTCACTGGCCTCCGGTTCCGATGATACCACAATCAAGATCTGGGATTGGGAGCTGGGTGAACTAGAG
CGCACAATCAAAGGACATACCAGGGCAGTGTTAGACGTCGATTATGGTGGACCGCGTGGAGGCACACTTCTTGCA
TCATGCTCGTCAGATCTAACGATCAAATTGTGGGACCCGGCTGACGAGTATAAGAACATCCGAACCCTACCAGGA
CACGACCACAGTGTTTCAGCAATTCGGTTCATTCCATCCGGAGCTGCAGGGTCTCCCATGTCAGGAAACCTGCTA
GTCTCGGCTTCTCGCGATCTCACACTGCGCATTTGGGACGTCACAACTGGATACTGTGTCAAATCCATGCAGGGA
CATGGAGACTGGATTCGAGATGTTACACCATCCCCAGACGGCCGGTTCCTCTTCTCCGGTGGAGACGATCGAGTC
GCACGTCTGTGGGATATCTCGTCTGGTGATACCAAGTCAACATTCCTGGGCCATGAACATTATATCGAGTGTGTA
GCCTTCGCTCCGGCAACAAGCTACCCTCACTTCGCAGCTCTTGCGGGGCTAAAGAAACCACCGCCAGCATCATCG
TCCGCCGAGTTTGTGGCTACTGGTTCTCGCGATAAGACTATCCGTCTCTGGGATACCCGCGGAAACTGCATCAAA
ACCCTTGTTGGTCACGACAACTGGGTCCGCTCATTGGTCTTCCATCCTGGCGGGAAATACCTTCTCTCGGTATCT
GACGACAAGACCATGCGGTGCTGGGATCTCACGCAAGAATGCAAGTGTGTGCGTACGATCGCGGCCCACGACCAC
TTTATCAGTTCGCTCCGGTGGGCACCGCCTTTGCTCAAGGATGCCGGTGCAAAGGAGGGTACGAACGGTGCCCCG
GCTGCGTCTAATGGGGCGAAGGAAGACCCTAATGCGACAAAGATGTCCATTCGATGTGTTCTGGCCACTGGCAGT
GTTGATCTCAAGGTCCGGGTCTGGGCGGCATGA
Transcript >Pro_DTO377G3_2|g5332.t1
ATGAGCCAACTTCTCACAACGCGGCAGGCGGAGGAGCTACATAAAGGAATGATCGCCTACCTTACCTCTGTGAAT
TTGCACCACAGCTCCGCCGCTTTACGAGAAGAACTGGGCGACTCGATCAGGGTCGACGAGAGCACACTAAAGAAA
TATGAAGGCCTGTTGGAGAAGAAATGGACGAGTGTAGTCCGGTTACAGAAAAAGATCATGGAACTGGAAGCACGA
TGCGCTGCACTCCAGTCCGAGCTGGATACCGCAACCCCGACTTCGCTGAATCGCAAAAACCAAGACCCCGTTACC
TGGCTGCCTCGAGCACCAGCGCGTCATGACCTCCAATCACACCGCTCGCCAGTATCGTGCCTCGCTTTCCATCCA
GTATTCTCTTCACTGGCCTCCGGTTCCGATGATACCACAATCAAGATCTGGGATTGGGAGCTGGGTGAACTAGAG
CGCACAATCAAAGGACATACCAGGGCAGTGTTAGACGTCGATTATGGTGGACCGCGTGGAGGCACACTTCTTGCA
TCATGCTCGTCAGATCTAACGATCAAATTGTGGGACCCGGCTGACGAGTATAAGAACATCCGAACCCTACCAGGA
CACGACCACAGTGTTTCAGCAATTCGGTTCATTCCATCCGGAGCTGCAGGGTCTCCCATGTCAGGAAACCTGCTA
GTCTCGGCTTCTCGCGATCTCACACTGCGCATTTGGGACGTCACAACTGGATACTGTGTCAAATCCATGCAGGGA
CATGGAGACTGGATTCGAGATGTTACACCATCCCCAGACGGCCGGTTCCTCTTCTCCGGTGGAGACGATCGAGTC
GCACGTCTGTGGGATATCTCGTCTGGTGATACCAAGTCAACATTCCTGGGCCATGAACATTATATCGAGTGTGTA
GCCTTCGCTCCGGCAACAAGCTACCCTCACTTCGCAGCTCTTGCGGGGCTAAAGAAACCACCGCCAGCATCATCG
TCCGCCGAGTTTGTGGCTACTGGTTCTCGCGATAAGACTATCCGTCTCTGGGATACCCGCGGAAACTGCATCAAA
ACCCTTGTTGGTCACGACAACTGGGTCCGCTCATTGGTCTTCCATCCTGGCGGGAAATACCTTCTCTCGGTATCT
GACGACAAGACCATGCGGTGCTGGGATCTCACGCAAGAATGCAAGTGTGTGCGTACGATCGCGGCCCACGACCAC
TTTATCAGTTCGCTCCGGTGGGCACCGCCTTTGCTCAAGGATGCCGGTGCAAAGGAGGGTACGAACGGTGCCCCG
GCTGCGTCTAATGGGGCGAAGGAAGACCCTAATGCGACAAAGATGTCCATTCGATGTGTTCTGGCCACTGGCAGT
GTTGATCTCAAGGTCCGGGTCTGGGCGGCATGA
Gene >Pro_DTO377G3_2|g5332.t1
ATGAGCCAACTTCTCACAACGCGGCAGGCGGAGGAGCTGTATGTGACCCGATCTGTTTCCTTTAGGGGTGATCGC
TGATGGTGTTTTGCGACAGACATAAAGGAATGATCGCCTACCTTACCTCTGTGAATTTGCACCACAGCTCCGCCG
CTTTACGAGAAGAACTGGGCGACTCGATCAGGGTCGACGAGAGCACACTAAAGAAATATGAAGGCCTGTTGGAGA
AGAAATGGACGAGTGTAGTCCGGTTACAGAAAAAGGTGCGACGACCGGGCATACCAACACGTCTACATCTTTTTA
ACCTGCAATGGTGGTATAGATCATGGAACTGGAAGCACGATGCGCTGCACTCCAGTCCGAGCTGGATACCGCAAC
CCCGACTTCGCTGAATCGCAAAAACCAAGACCCCGTTACCTGGCTGCCTCGAGCACCAGCGCGTCATGACCTCCA
ATCACACCGCTCGCCAGTATCGTGCCTCGCTTTCCATCCAGTATTCTCTTCACTGGCCTCCGGTTCCGATGATAC
CACAATCAAGATCTGGGATTGGGAGCTGGGTGAACTAGAGCGCACAATCAAAGGACATACCAGGGCAGTGTTAGA
CGTCGATTATGGTGGACCGCGTGGAGGCACACTTCTTGCATCATGCTCGTCAGATCTAACGATCAAATTGTGGGA
CCCGGCTGACGAGTATAAGAACATCCGAACCCTACCAGGACACGACCACAGTGTTTCAGCAATTCGGTTCATTCC
ATCCGGAGCTGCAGGGTCTCCCATGTCAGGAAACCTGCTAGTCTCGGCTTCTCGCGATCTCACACTGCGCATTTG
GGACGTCACAACTGGATACTGTGTCAAATCCATGCAGGGACATGGAGACTGGATTCGAGATGTTACACCATCCCC
AGACGGCCGGTTCCTCTTCTCCGGTGGAGACGATCGAGTCGCACGTCTGTGGGATATCTCGTCTGGTGATACCAA
GTCAACATTCCTGGGCCATGAACATTATATCGAGTGTGTAGCCTTCGCTCCGGCAACAAGCTACCCTCACTTCGC
AGCTCTTGCGGGGCTAAAGAAACCACCGCCAGCATCATCGTCCGCCGAGTTTGTGGCTACTGGTTCTCGCGATAA
GACTATCCGTCTCTGGGATACCCGCGGAAACTGCATCAAAACCCTTGTTGGTCACGACAACTGGGTCCGCTCATT
GGTCTTCCATCCTGGCGGGAAATACCTTCTCTCGGTATCTGACGACAAGACCATGCGGTGCTGGGATCTCACGCA
AGAATGCAAGTGTGTGCGTACGATCGCGGCCCACGACCACTTTATCAGTTCGCTCCGGTGGGCACCGCCTTTGCT
CAAGGATGCCGGTGCAAAGGAGGGTACGAACGGTGCCCCGGCTGCGTCTAATGGGGCGAAGGAAGACCCTAATGC
GACAAAGATGTCCATTCGATGTGTTCTGGCCACTGGCAGTGTTGATCTCAAGGTCCGGGTCTGGGCGGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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