Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5318.t1
Gene name
Locationscaffold_12:469825..471614
Strand-
Gene length (bp)1789
Transcript length (bp)1566
Coding sequence length (bp)1566
Protein length (aa) 522

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 2.6E-50 25 469
PF00324 AA_permease Amino acid permease 7.9E-21 47 482

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22
2 57 79 22
3 119 141 22
4 153 170 17
5 180 199 19
6 263 285 22
7 311 333 22
8 354 376 22
9 391 413 22
10 426 448 22
11 463 482 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5318.t1
MHSPKFQDDIDLEARGYQRAMPRQFSTFSLVALSFSLTCTWSGTGSSIGISLQEASAAGTIWSLPVAALMTAILS
AGVAELASAYPVAGAQYYWAFCLASKDWRAFASYMNGWLSILGWWLASGAACNFIASLILSIVVLWYPDYEIQNW
QQWLVYLGIVWLSVALNTWGSQLLSLYNRLNFLVACVTLTATTITLFVCSRTNHAAPKWTLGDATNGTGWKSDGL
AFLLAISNAVYAFLGTDCGAHVCEEIHDPARNTPKVILYPVLMGLVTALPFSAACMNAITDLDAVLNSPSGVPLI
EIYYQSTGSKGASSVLLALFAFCFFGCTVGNGTTCSRTIWAVSRDNMLPFSEKWAIVNPNFQIPLNALCLSSIIV
SLYGLIFLGSSTAFSAMAGAAVIFLQTSCALPQAILLWRGRHIMPERPFSLGRFGFAINLISVLWVILLDILCFL
PTEMPVTKENMNYVSVVSVGLTAAVLALYVFSKRGQYLGPRLPNELGQIVDGEELGNMELKDSGEKMSKKE*
Coding >Pro_DTO377G3_2|g5318.t1
ATGCATTCGCCAAAGTTCCAGGATGATATCGATCTTGAAGCTCGCGGATATCAACGTGCGATGCCGCGACAATTC
TCCACATTCAGTCTTGTTGCCCTCTCTTTCAGTCTAACGTGCACTTGGTCCGGCACTGGCTCATCAATCGGTATC
TCTTTACAGGAGGCCTCGGCCGCTGGCACTATATGGTCTCTTCCAGTGGCTGCTCTCATGACAGCAATTCTGTCG
GCTGGCGTGGCGGAATTAGCATCGGCCTATCCAGTCGCCGGTGCTCAGTACTACTGGGCATTCTGTCTTGCATCT
AAAGATTGGCGAGCTTTTGCTTCTTACATGAATGGCTGGTTGAGCATTTTGGGGTGGTGGCTAGCCAGCGGTGCA
GCCTGCAACTTCATTGCATCCCTAATCCTGTCCATCGTGGTTCTCTGGTATCCAGACTATGAGATCCAGAACTGG
CAACAATGGCTCGTCTATCTTGGCATAGTATGGCTCTCGGTCGCACTCAATACCTGGGGCTCACAGCTTCTTTCT
CTTTACAATCGTTTGAACTTCCTCGTCGCATGTGTCACTCTCACCGCAACAACGATCACGCTGTTCGTTTGCAGT
CGAACAAACCACGCCGCTCCTAAGTGGACACTCGGCGATGCCACAAATGGAACAGGGTGGAAAAGTGATGGGCTC
GCCTTCCTACTAGCGATCAGTAACGCCGTGTACGCATTTCTTGGAACGGACTGCGGAGCACATGTCTGCGAAGAG
ATCCATGACCCTGCTCGAAACACGCCTAAGGTCATCCTATATCCCGTCCTTATGGGCTTGGTTACTGCGCTTCCC
TTTTCTGCCGCTTGCATGAATGCCATTACCGATCTGGACGCAGTTCTGAATTCGCCATCGGGTGTTCCCCTAATC
GAGATTTACTATCAAAGTACCGGGTCTAAGGGAGCTTCGTCTGTTCTGTTGGCTTTGTTCGCGTTCTGCTTTTTT
GGGTGCACCGTTGGCAATGGCACCACATGCTCGAGAACGATCTGGGCTGTCTCACGTGATAACATGCTTCCATTT
AGTGAGAAATGGGCAATCGTCAACCCTAACTTTCAGATCCCACTGAATGCACTCTGTCTGAGTAGCATCATTGTT
TCGCTATACGGCCTGATTTTCCTCGGCTCATCAACCGCCTTTTCTGCGATGGCTGGTGCCGCCGTAATCTTCCTG
CAAACTTCCTGTGCCCTGCCGCAGGCTATTCTTTTGTGGCGTGGTCGGCACATTATGCCTGAGCGGCCCTTTTCG
CTCGGTCGATTTGGGTTTGCCATCAATCTTATCTCGGTGCTATGGGTGATTCTTCTTGACATCCTTTGCTTCCTC
CCGACTGAGATGCCGGTGACTAAAGAGAATATGAACTACGTCTCTGTCGTGTCGGTTGGTCTGACGGCGGCTGTA
CTCGCACTGTATGTCTTTTCTAAAAGGGGTCAGTATCTTGGACCCCGGCTACCGAATGAACTCGGCCAGATAGTG
GATGGAGAGGAACTTGGCAATATGGAACTGAAAGATTCGGGCGAGAAAATGTCTAAGAAGGAGTGA
Transcript >Pro_DTO377G3_2|g5318.t1
ATGCATTCGCCAAAGTTCCAGGATGATATCGATCTTGAAGCTCGCGGATATCAACGTGCGATGCCGCGACAATTC
TCCACATTCAGTCTTGTTGCCCTCTCTTTCAGTCTAACGTGCACTTGGTCCGGCACTGGCTCATCAATCGGTATC
TCTTTACAGGAGGCCTCGGCCGCTGGCACTATATGGTCTCTTCCAGTGGCTGCTCTCATGACAGCAATTCTGTCG
GCTGGCGTGGCGGAATTAGCATCGGCCTATCCAGTCGCCGGTGCTCAGTACTACTGGGCATTCTGTCTTGCATCT
AAAGATTGGCGAGCTTTTGCTTCTTACATGAATGGCTGGTTGAGCATTTTGGGGTGGTGGCTAGCCAGCGGTGCA
GCCTGCAACTTCATTGCATCCCTAATCCTGTCCATCGTGGTTCTCTGGTATCCAGACTATGAGATCCAGAACTGG
CAACAATGGCTCGTCTATCTTGGCATAGTATGGCTCTCGGTCGCACTCAATACCTGGGGCTCACAGCTTCTTTCT
CTTTACAATCGTTTGAACTTCCTCGTCGCATGTGTCACTCTCACCGCAACAACGATCACGCTGTTCGTTTGCAGT
CGAACAAACCACGCCGCTCCTAAGTGGACACTCGGCGATGCCACAAATGGAACAGGGTGGAAAAGTGATGGGCTC
GCCTTCCTACTAGCGATCAGTAACGCCGTGTACGCATTTCTTGGAACGGACTGCGGAGCACATGTCTGCGAAGAG
ATCCATGACCCTGCTCGAAACACGCCTAAGGTCATCCTATATCCCGTCCTTATGGGCTTGGTTACTGCGCTTCCC
TTTTCTGCCGCTTGCATGAATGCCATTACCGATCTGGACGCAGTTCTGAATTCGCCATCGGGTGTTCCCCTAATC
GAGATTTACTATCAAAGTACCGGGTCTAAGGGAGCTTCGTCTGTTCTGTTGGCTTTGTTCGCGTTCTGCTTTTTT
GGGTGCACCGTTGGCAATGGCACCACATGCTCGAGAACGATCTGGGCTGTCTCACGTGATAACATGCTTCCATTT
AGTGAGAAATGGGCAATCGTCAACCCTAACTTTCAGATCCCACTGAATGCACTCTGTCTGAGTAGCATCATTGTT
TCGCTATACGGCCTGATTTTCCTCGGCTCATCAACCGCCTTTTCTGCGATGGCTGGTGCCGCCGTAATCTTCCTG
CAAACTTCCTGTGCCCTGCCGCAGGCTATTCTTTTGTGGCGTGGTCGGCACATTATGCCTGAGCGGCCCTTTTCG
CTCGGTCGATTTGGGTTTGCCATCAATCTTATCTCGGTGCTATGGGTGATTCTTCTTGACATCCTTTGCTTCCTC
CCGACTGAGATGCCGGTGACTAAAGAGAATATGAACTACGTCTCTGTCGTGTCGGTTGGTCTGACGGCGGCTGTA
CTCGCACTGTATGTCTTTTCTAAAAGGGGTCAGTATCTTGGACCCCGGCTACCGAATGAACTCGGCCAGATAGTG
GATGGAGAGGAACTTGGCAATATGGAACTGAAAGATTCGGGCGAGAAAATGTCTAAGAAGGAGTGA
Gene >Pro_DTO377G3_2|g5318.t1
ATGCATTCGCCAAAGTTCCAGGATGATATCGATCTTGAAGCTCGCGGATATCAACGTGCGATGCCGCGACAATTC
TCCACATTCAGTCTTGTTGCCCTCTCTTTCAGTCTAACGTGCACTTGGTCCGGCACTGGCTCATCAATCGGTATC
TCTTTACAGGAGGCCTCGGCCGCTGGCACTATATGGTCTCTTCCAGTGGCTGCTCTCATGACAGCAATTCTGTCG
GCTGGCGTGGCGGAATTAGCATCGGCCTATCCAGTCGCCGGTGCTCAGTACTACTGGGCATTCTGTCTTGCATCT
AAAGATTGGCGAGCTTTTGCTTCTTACATGTTCGTGCTTCCAATACCTATCAGATGGTTGATGCTAACATATTGT
GCAGGAATGGCTGGTTGAGCATTTTGGGGTGGTGGCTAGCCAGCGGTGCAGCCTGCAACTTCATTGCATCCCTAA
TCCTGTCCATCGTGGTTCTCTGGTATCCAGACTATGAGATCCAGAACTGGCAACAATGGCTCGTCTATCTTGGCA
TAGTATGGCTCTCGGTCGCACTCAATACCTGGGGCTCACAGCTTCTTTCTCTTTACAATCGTTTGAACTGTTGGT
CAATCCATGCTCTACTTCCTATTGAATATCAATCTAACGACCTTAACCCATCGGCAGTCCTCGTCGCATGTGTCA
CTCTCACCGCAACAACGATCACGCTGTTCGTTTGCAGTCGAACAAACCACGCCGCTCCTAAGTGGACACTCGGCG
ATGCCACAAATGGAACAGGGTGGAAAAGTGATGGGCTCGCCTTCCTACTAGCGATCAGTAACGCCGTGTACGCAT
TTCTTGGAACGGACTGCGGAGCACATGTCTGCGAAGAGATCCATGACCCTGCTCGAAACACGCCTAAGGTCATCC
TATATCCCGTCCTTATGGGCTTGGTTACTGCGCTTCCCTTTTCTGCCGCTTGCATGAATGCCATTACCGATCTGG
ACGCAGTTCTGAATTCGCCATCGGGTGTTCCCCTAATCGAGATTTACTATCAAAGTACCGGGTCTAAGGGAGCTT
CGTCTGTTCTGTTGGCTTTGTTCGCGTTCTGCTTTTTTGGGTGCACCGTTGGCAATGGTGAGTCTACTCCTTTTT
GGAAGATTATCCTTGAATACTTGCTTATATCTTGTACTTCAGGCACCACATGCTCGAGAACGATCTGGGCTGTCT
CACGTGATAACATGCTTCCATTTAGTGAGAAATGGGCAATCGTCAACCCTAACTTTCAGATCCCACTGAATGCAC
TCTGTCTGAGTAGCATCATTGTTTCGGTAAGTATCTCATGTGATAAAGCCTGGTCATTTCTAACCCCGGTTACCA
GCTATACGGCCTGATTTTCCTCGGCTCATCAACCGCCTTTTCTGCGATGGCTGGTGCCGCCGTAATCTTCCTGCA
AACTTCCTGTGCCCTGCCGCAGGCTATTCTTTTGTGGCGTGGTCGGCACATTATGCCTGAGCGGCCCTTTTCGCT
CGGTCGATTTGGGTTTGCCATCAATCTTATCTCGGTGCTATGGGTGATTCTTCTTGACATCCTTTGCTTCCTCCC
GACTGAGATGCCGGTGACTAAAGAGAATATGAACTACGTCTCTGTCGTGTCGGTTGGTCTGACGGCGGCTGTACT
CGCACTGTATGTCTTTTCTAAAAGGGGTCAGTATCTTGGACCCCGGCTACCGAATGAACTCGGCCAGATAGTGGA
TGGAGAGGAACTTGGCAATATGGAACTGAAAGATTCGGGCGAGAAAATGTCTAAGAAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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