Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5311.t1
Gene name
Location	scaffold_12:449381..450182
Strand	+
Gene length (bp)	801
Transcript length (bp)	738
Coding sequence length (bp)	738
Protein length (aa)	246

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13561	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	1.9E-58	12	244
PF00106	adh_short	short chain dehydrogenase	5.0E-45	6	192
PF08659	KR	KR domain	2.7E-09	8	166

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 44	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	133	155	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5311.t1 MSLSGKVVLITGSSKGIGKATVLRLASEGASVIINYLSDEAAANNLVAQIGPDRALAVQADASNLSDLDRLVDSA VAKFGKIDILIPNAGILPMKDLENTTEADFDNAYNLMVKGPYFLAQKATKHMPSGGRVIFISTGITALSSVAPAY LLYASAKGAINQMARVMAKDLARKNIIVNAVAPGPTTTELFLKGKSEQVLNAVAGFSPFGRIGKPEEIANVIAFL CGEDSSWMSGQIVQVNGGMA*
Coding	>Pro_DTO377G3_2\|g5311.t1 ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGAAAGCCACAAAG CACATGCCCTCCGGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTAT CTTCTCTATGCGTCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAAT ATTATCGTGAATGCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTC AATGCAGTCGCTGGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTG TGTGGAGAGGATAGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG
Transcript	>Pro_DTO377G3_2\|g5311.t1 ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGAAAGCCACAAAG CACATGCCCTCCGGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTAT CTTCTCTATGCGTCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAAT ATTATCGTGAATGCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTC AATGCAGTCGCTGGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTG TGTGGAGAGGATAGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG
Gene	>Pro_DTO377G3_2\|g5311.t1 ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGGTAAGTACTAGA GTACATTCTTGTCCTAAATCATAGCATTCAATGATACTAACCGTGTTCTAGAAAGCCACAAAGCACATGCCCTCC GGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTATCTTCTCTATGCG TCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAATATTATCGTGAAT GCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTCAATGCAGTCGCT GGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTGTGTGGAGAGGAT AGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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