Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5311.t1
Gene name
Locationscaffold_12:449381..450182
Strand+
Gene length (bp)801
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 9.8E-59 12 244
PF00106 adh_short short chain dehydrogenase 4.5E-45 6 192
PF08659 KR KR domain 1.7E-09 7 168

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

Domain # Start End Length
1 133 155 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5311.t1
MSLSGKVVLITGSSKGIGKATVLRLASEGASVIINYLSDEAAANNLVAQIGPDRALAVQADASNLSDLDRLVDSA
VAKFGKIDILIPNAGILPMKDLENTTEADFDNAYNLMVKGPYFLAQKATKHMPSGGRVIFISTGITALSSVAPAY
LLYASAKGAINQMARVMAKDLARKNIIVNAVAPGPTTTELFLKGKSEQVLNAVAGFSPFGRIGKPEEIANVIAFL
CGEDSSWMSGQIVQVNGGMA*
Coding >Pro_DTO377G3_2|g5311.t1
ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT
GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC
GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA
GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA
ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGAAAGCCACAAAG
CACATGCCCTCCGGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTAT
CTTCTCTATGCGTCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAAT
ATTATCGTGAATGCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTC
AATGCAGTCGCTGGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTG
TGTGGAGAGGATAGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG
Transcript >Pro_DTO377G3_2|g5311.t1
ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT
GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC
GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA
GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA
ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGAAAGCCACAAAG
CACATGCCCTCCGGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTAT
CTTCTCTATGCGTCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAAT
ATTATCGTGAATGCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTC
AATGCAGTCGCTGGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTG
TGTGGAGAGGATAGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG
Gene >Pro_DTO377G3_2|g5311.t1
ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT
GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC
GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA
GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA
ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGGTAAGTACTAGA
GTACATTCTTGTCCTAAATCATAGCATTCAATGATACTAACCGTGTTCTAGAAAGCCACAAAGCACATGCCCTCC
GGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTATCTTCTCTATGCG
TCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAATATTATCGTGAAT
GCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTCAATGCAGTCGCT
GGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTGTGTGGAGAGGAT
AGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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