Protein ID | Pro_DTO377G3_2|g5311.t1 |
Gene name | |
Location | scaffold_12:449381..450182 |
Strand | + |
Gene length (bp) | 801 |
Transcript length (bp) | 738 |
Coding sequence length (bp) | 738 |
Protein length (aa) | 246 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.9E-58 | 12 | 244 |
PF00106 | adh_short | short chain dehydrogenase | 5.0E-45 | 6 | 192 |
PF08659 | KR | KR domain | 2.7E-09 | 8 | 166 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 133 | 155 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5311.t1 MSLSGKVVLITGSSKGIGKATVLRLASEGASVIINYLSDEAAANNLVAQIGPDRALAVQADASNLSDLDRLVDSA VAKFGKIDILIPNAGILPMKDLENTTEADFDNAYNLMVKGPYFLAQKATKHMPSGGRVIFISTGITALSSVAPAY LLYASAKGAINQMARVMAKDLARKNIIVNAVAPGPTTTELFLKGKSEQVLNAVAGFSPFGRIGKPEEIANVIAFL CGEDSSWMSGQIVQVNGGMA* |
Coding | >Pro_DTO377G3_2|g5311.t1 ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGAAAGCCACAAAG CACATGCCCTCCGGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTAT CTTCTCTATGCGTCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAAT ATTATCGTGAATGCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTC AATGCAGTCGCTGGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTG TGTGGAGAGGATAGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG |
Transcript | >Pro_DTO377G3_2|g5311.t1 ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGAAAGCCACAAAG CACATGCCCTCCGGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTAT CTTCTCTATGCGTCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAAT ATTATCGTGAATGCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTC AATGCAGTCGCTGGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTG TGTGGAGAGGATAGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG |
Gene | >Pro_DTO377G3_2|g5311.t1 ATGTCTCTCTCTGGAAAAGTCGTCCTCATCACTGGCTCCTCCAAAGGAATCGGAAAGGCAACAGTCCTCCGCCTT GCCAGCGAAGGAGCCAGCGTAATAATCAACTACCTCTCCGATGAAGCCGCAGCCAACAACCTTGTCGCACAGATC GGGCCCGACCGCGCCTTAGCTGTCCAAGCAGATGCATCCAATCTGTCCGATCTCGATCGCCTCGTGGATTCCGCA GTCGCCAAGTTCGGGAAGATTGACATCCTCATTCCAAATGCAGGAATCCTCCCAATGAAGGACTTGGAGAATACA ACCGAAGCGGATTTTGACAACGCATACAATCTCATGGTGAAGGGCCCATACTTCCTAGCCCAGGTAAGTACTAGA GTACATTCTTGTCCTAAATCATAGCATTCAATGATACTAACCGTGTTCTAGAAAGCCACAAAGCACATGCCCTCC GGTGGCAGGGTCATTTTCATCTCTACAGGGATCACTGCTCTTTCCAGCGTCGCACCCGCCTATCTTCTCTATGCG TCTGCTAAAGGTGCCATCAATCAAATGGCTCGTGTCATGGCCAAAGACCTGGCACGGAAGAATATTATCGTGAAT GCCGTCGCACCGGGGCCTACCACTACCGAGCTCTTCTTGAAGGGGAAGTCAGAACAGGTCCTCAATGCAGTCGCT GGGTTTAGTCCGTTTGGTCGGATTGGGAAACCGGAGGAGATTGCTAATGTCATTGCCTTTTTGTGTGGAGAGGAT AGTAGCTGGATGTCAGGTCAGATTGTGCAGGTCAATGGCGGAATGGCGTAG |