© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g531.t1 |
| Gene name | |
| Location | scaffold_01:1359195..1360080 |
| Strand | - |
| Gene length (bp) | 885 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16278 | zf-C2HE | C2HE / C2H2 / C2HC zinc-binding finger | 2.3E-19 | 215 | 270 |
| PF01230 | HIT | HIT domain | 9.2E-18 | 73 | 198 |
| PF11969 | DcpS_C | Scavenger mRNA decapping enzyme C-term binding | 1.4E-16 | 73 | 209 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g531.t1 MSGDHSNPTKADPKKQTGTSEKRNAFTELLAPKSKQSKHATKTPSDRNAAKGRTAFGVRDGLGTYITKPEKYAPD VVVYHNDDFVAIHDMFPKSSLHLLLLPRDQTKTRMHPFDAFEDADFLAKVRAETRTLRKLAASELRRKYGKDSAQ EQARQTALSADPPPDELPRGRDWEQEIMVGVHAVPSMNHLHVHVLSVDRYSERLKHRKHYNSFSTPFFVPIEDFP LAEDDVRRNPTEEEYLKRDFACWRCGRGFGNRFAELKQHLEGEFKEWKKL* |
| Coding | >Pro_DTO377G3_2|g531.t1 ATGTCCGGGGACCACTCCAATCCGACCAAAGCTGACCCAAAGAAGCAAACTGGGACGTCAGAAAAGAGGAATGCC TTTACCGAACTCCTGGCTCCTAAAAGCAAGCAATCCAAACACGCGACTAAAACCCCGTCTGATCGCAATGCGGCC AAGGGCAGGACTGCATTTGGTGTTCGCGATGGACTAGGCACCTACATCACAAAGCCTGAGAAATATGCTCCCGAT GTCGTGGTCTACCACAATGACGATTTTGTGGCGATCCACGACATGTTCCCAAAGTCATCGTTGCACCTCCTCCTT CTCCCCCGCGACCAGACCAAAACACGAATGCACCCATTTGATGCATTTGAGGATGCCGACTTCCTAGCAAAAGTG AGGGCCGAAACTCGAACACTTCGCAAGCTGGCAGCGAGCGAGCTGCGACGCAAATATGGGAAGGACTCTGCGCAG GAGCAGGCGAGACAGACGGCACTGAGCGCCGATCCGCCGCCCGACGAGCTACCGCGGGGTCGGGACTGGGAACAG GAGATTATGGTTGGGGTGCATGCAGTTCCATCTATGAACCACTTGCATGTCCATGTATTATCGGTGGATAGGTAT AGCGAGCGCTTGAAGCACCGGAAACACTACAATAGCTTTTCGACACCATTCTTCGTGCCAATCGAGGACTTCCCG CTGGCGGAAGATGATGTGCGACGGAATCCGACGGAAGAGGAGTACCTAAAACGAGACTTTGCTTGCTGGCGCTGT GGTAGGGGGTTTGGGAATCGGTTTGCGGAATTGAAGCAACATCTGGAGGGGGAATTTAAAGAATGGAAGAAACTG TGA |
| Transcript | >Pro_DTO377G3_2|g531.t1 ATGTCCGGGGACCACTCCAATCCGACCAAAGCTGACCCAAAGAAGCAAACTGGGACGTCAGAAAAGAGGAATGCC TTTACCGAACTCCTGGCTCCTAAAAGCAAGCAATCCAAACACGCGACTAAAACCCCGTCTGATCGCAATGCGGCC AAGGGCAGGACTGCATTTGGTGTTCGCGATGGACTAGGCACCTACATCACAAAGCCTGAGAAATATGCTCCCGAT GTCGTGGTCTACCACAATGACGATTTTGTGGCGATCCACGACATGTTCCCAAAGTCATCGTTGCACCTCCTCCTT CTCCCCCGCGACCAGACCAAAACACGAATGCACCCATTTGATGCATTTGAGGATGCCGACTTCCTAGCAAAAGTG AGGGCCGAAACTCGAACACTTCGCAAGCTGGCAGCGAGCGAGCTGCGACGCAAATATGGGAAGGACTCTGCGCAG GAGCAGGCGAGACAGACGGCACTGAGCGCCGATCCGCCGCCCGACGAGCTACCGCGGGGTCGGGACTGGGAACAG GAGATTATGGTTGGGGTGCATGCAGTTCCATCTATGAACCACTTGCATGTCCATGTATTATCGGTGGATAGGTAT AGCGAGCGCTTGAAGCACCGGAAACACTACAATAGCTTTTCGACACCATTCTTCGTGCCAATCGAGGACTTCCCG CTGGCGGAAGATGATGTGCGACGGAATCCGACGGAAGAGGAGTACCTAAAACGAGACTTTGCTTGCTGGCGCTGT GGTAGGGGGTTTGGGAATCGGTTTGCGGAATTGAAGCAACATCTGGAGGGGGAATTTAAAGAATGGAAGAAACTG TGA |
| Gene | >Pro_DTO377G3_2|g531.t1 ATGTCCGGGGACCACTCCAATCCGACCAAAGCTGACCCAAAGAAGCAAACTGGGACGTCAGAAAAGAGGAATGCC TGTAAAGACCGAGAGACGTATCACTGAAAAATACTTGACTGACATATCGGTTTGACAGTTACCGAACTCCTGGCT CCTAAAAGCAAGCAATCCAAACACGCGACTAAAACCCCGTCTGATCGCAATGCGGCCAAGGGCAGGACTGCATTT GGTGTTCGCGATGGACTAGGCACCTACATCACAAAGCCTGAGAAATATGCTCCCGATGTCGTGGTCTACCACAAT GACGATTTTGTGGCGATCCACGACATGTTCCCAAAGTCATCGTTGCACCTCCTCCTTCTCCCCCGCGACCAGACC AAAACACGAATGCACCCATTTGATGCATTTGAGGATGCCGACTTCCTAGCAAAAGTGAGGGCCGAAACTCGAACA CTTCGCAAGCTGGCAGCGAGCGAGCTGCGACGCAAATATGGGAAGGACTCTGCGCAGGAGCAGGCGAGACAGACG GCACTGAGCGCCGATCCGCCGCCCGACGAGCTACCGCGGGGTCGGGACTGGGAACAGGAGATTATGGTTGGGGTG CATGCAGTTCCATCTATGAACCACTTGCATGTCCATGTATTATCGGTGGATAGGTATAGCGAGCGCTTGAAGCAC CGGAAACACTACAATAGCTTTTCGACACCATTCTTCGTGCCAATCGAGGACTTCCCGCTGGCGGAAGATGATGTG CGACGGAATCCGACGGAAGAGGAGTACCTAAAACGAGACTTTGCTTGCTGGCGCTGTGGTAGGGGGTTTGGGAAT CGGTTTGCGGAATTGAAGCAACATCTGGAGGGGGAATTTAAAGAATGGAAGAAACTGTGA |