Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g531.t1
Gene name
Locationscaffold_01:1359195..1360080
Strand-
Gene length (bp)885
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16278 zf-C2HE C2HE / C2H2 / C2HC zinc-binding finger 6.7E-20 214 270
PF01230 HIT HIT domain 1.8E-17 73 198
PF11969 DcpS_C Scavenger mRNA decapping enzyme C-term binding 3.0E-16 73 209

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g531.t1
MSGDHSNPTKADPKKQTGTSEKRNAFTELLAPKSKQSKHATKTPSDRNAAKGRTAFGVRDGLGTYITKPEKYAPD
VVVYHNDDFVAIHDMFPKSSLHLLLLPRDQTKTRMHPFDAFEDADFLAKVRAETRTLRKLAASELRRKYGKDSAQ
EQARQTALSADPPPDELPRGRDWEQEIMVGVHAVPSMNHLHVHVLSVDRYSERLKHRKHYNSFSTPFFVPIEDFP
LAEDDVRRNPTEEEYLKRDFACWRCGRGFGNRFAELKQHLEGEFKEWKKL*
Coding >Pro_DTO377G3_2|g531.t1
ATGTCCGGGGACCACTCCAATCCGACCAAAGCTGACCCAAAGAAGCAAACTGGGACGTCAGAAAAGAGGAATGCC
TTTACCGAACTCCTGGCTCCTAAAAGCAAGCAATCCAAACACGCGACTAAAACCCCGTCTGATCGCAATGCGGCC
AAGGGCAGGACTGCATTTGGTGTTCGCGATGGACTAGGCACCTACATCACAAAGCCTGAGAAATATGCTCCCGAT
GTCGTGGTCTACCACAATGACGATTTTGTGGCGATCCACGACATGTTCCCAAAGTCATCGTTGCACCTCCTCCTT
CTCCCCCGCGACCAGACCAAAACACGAATGCACCCATTTGATGCATTTGAGGATGCCGACTTCCTAGCAAAAGTG
AGGGCCGAAACTCGAACACTTCGCAAGCTGGCAGCGAGCGAGCTGCGACGCAAATATGGGAAGGACTCTGCGCAG
GAGCAGGCGAGACAGACGGCACTGAGCGCCGATCCGCCGCCCGACGAGCTACCGCGGGGTCGGGACTGGGAACAG
GAGATTATGGTTGGGGTGCATGCAGTTCCATCTATGAACCACTTGCATGTCCATGTATTATCGGTGGATAGGTAT
AGCGAGCGCTTGAAGCACCGGAAACACTACAATAGCTTTTCGACACCATTCTTCGTGCCAATCGAGGACTTCCCG
CTGGCGGAAGATGATGTGCGACGGAATCCGACGGAAGAGGAGTACCTAAAACGAGACTTTGCTTGCTGGCGCTGT
GGTAGGGGGTTTGGGAATCGGTTTGCGGAATTGAAGCAACATCTGGAGGGGGAATTTAAAGAATGGAAGAAACTG
TGA
Transcript >Pro_DTO377G3_2|g531.t1
ATGTCCGGGGACCACTCCAATCCGACCAAAGCTGACCCAAAGAAGCAAACTGGGACGTCAGAAAAGAGGAATGCC
TTTACCGAACTCCTGGCTCCTAAAAGCAAGCAATCCAAACACGCGACTAAAACCCCGTCTGATCGCAATGCGGCC
AAGGGCAGGACTGCATTTGGTGTTCGCGATGGACTAGGCACCTACATCACAAAGCCTGAGAAATATGCTCCCGAT
GTCGTGGTCTACCACAATGACGATTTTGTGGCGATCCACGACATGTTCCCAAAGTCATCGTTGCACCTCCTCCTT
CTCCCCCGCGACCAGACCAAAACACGAATGCACCCATTTGATGCATTTGAGGATGCCGACTTCCTAGCAAAAGTG
AGGGCCGAAACTCGAACACTTCGCAAGCTGGCAGCGAGCGAGCTGCGACGCAAATATGGGAAGGACTCTGCGCAG
GAGCAGGCGAGACAGACGGCACTGAGCGCCGATCCGCCGCCCGACGAGCTACCGCGGGGTCGGGACTGGGAACAG
GAGATTATGGTTGGGGTGCATGCAGTTCCATCTATGAACCACTTGCATGTCCATGTATTATCGGTGGATAGGTAT
AGCGAGCGCTTGAAGCACCGGAAACACTACAATAGCTTTTCGACACCATTCTTCGTGCCAATCGAGGACTTCCCG
CTGGCGGAAGATGATGTGCGACGGAATCCGACGGAAGAGGAGTACCTAAAACGAGACTTTGCTTGCTGGCGCTGT
GGTAGGGGGTTTGGGAATCGGTTTGCGGAATTGAAGCAACATCTGGAGGGGGAATTTAAAGAATGGAAGAAACTG
TGA
Gene >Pro_DTO377G3_2|g531.t1
ATGTCCGGGGACCACTCCAATCCGACCAAAGCTGACCCAAAGAAGCAAACTGGGACGTCAGAAAAGAGGAATGCC
TGTAAAGACCGAGAGACGTATCACTGAAAAATACTTGACTGACATATCGGTTTGACAGTTACCGAACTCCTGGCT
CCTAAAAGCAAGCAATCCAAACACGCGACTAAAACCCCGTCTGATCGCAATGCGGCCAAGGGCAGGACTGCATTT
GGTGTTCGCGATGGACTAGGCACCTACATCACAAAGCCTGAGAAATATGCTCCCGATGTCGTGGTCTACCACAAT
GACGATTTTGTGGCGATCCACGACATGTTCCCAAAGTCATCGTTGCACCTCCTCCTTCTCCCCCGCGACCAGACC
AAAACACGAATGCACCCATTTGATGCATTTGAGGATGCCGACTTCCTAGCAAAAGTGAGGGCCGAAACTCGAACA
CTTCGCAAGCTGGCAGCGAGCGAGCTGCGACGCAAATATGGGAAGGACTCTGCGCAGGAGCAGGCGAGACAGACG
GCACTGAGCGCCGATCCGCCGCCCGACGAGCTACCGCGGGGTCGGGACTGGGAACAGGAGATTATGGTTGGGGTG
CATGCAGTTCCATCTATGAACCACTTGCATGTCCATGTATTATCGGTGGATAGGTATAGCGAGCGCTTGAAGCAC
CGGAAACACTACAATAGCTTTTCGACACCATTCTTCGTGCCAATCGAGGACTTCCCGCTGGCGGAAGATGATGTG
CGACGGAATCCGACGGAAGAGGAGTACCTAAAACGAGACTTTGCTTGCTGGCGCTGTGGTAGGGGGTTTGGGAAT
CGGTTTGCGGAATTGAAGCAACATCTGGAGGGGGAATTTAAAGAATGGAAGAAACTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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