Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5308.t1
Gene name
Locationscaffold_12:444042..444985
Strand-
Gene length (bp)943
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02668 TauD Taurine catabolism dioxygenase TauD, TfdA family 2.8E-15 107 288
PF08943 CsiD CsiD 1.1E-04 125 287

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0055114 oxidation-reduction process Yes
GO:0005506 iron ion binding Yes
GO:0046914 transition metal ion binding No
GO:0008150 biological_process No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5308.t1
MHQLFRAVSTARLTASYSTRPIRDLRTSNLVPLIEIPKPALASDASHLRAVYDTLEAKGVLQVHLGFSDENSTYL
QSLISNLHKNHNHGLPITHSAERGWFWDVRPSPASFQSHGHQARSETMFRFEWHTDCSYEEQPPRFFALQVLQPD
RRGGGTLSVLNVDRLLTLLSPFAQKWLSSHNYKITVPPEFIKTERKQHIVANLLAVNPDGKSGSQLRFREDITVP
LTPNATKALDELKEILYGGGARDETLHLTPQCLLQGSIILMDNRRWLHSRNEVKDPNRHLRRVRWDAAPFGSS*
Coding >Pro_DTO377G3_2|g5308.t1
ATGCATCAACTCTTCCGTGCTGTTTCTACAGCCAGACTGACGGCAAGTTATTCTACCCGCCCTATCAGAGATTTA
CGAACCTCCAATCTCGTCCCCCTAATCGAAATTCCCAAGCCAGCACTCGCCTCCGACGCCTCCCACTTGAGAGCC
GTATACGATACCCTCGAAGCGAAAGGTGTGCTCCAAGTACATCTAGGGTTTAGCGACGAGAACAGCACATATCTG
CAGAGTCTGATATCGAATCTCCACAAAAACCACAACCACGGCCTCCCAATAACACACAGCGCCGAGCGCGGTTGG
TTCTGGGATGTTCGGCCCTCCCCAGCGAGTTTCCAAAGCCATGGCCACCAAGCCCGATCAGAGACAATGTTCCGA
TTTGAATGGCACACCGACTGCAGCTATGAAGAGCAACCACCCAGATTCTTCGCCCTCCAAGTCCTTCAGCCAGAC
CGCCGCGGCGGCGGGACGTTGTCTGTGCTGAACGTCGATCGACTCCTTACCTTGCTTTCGCCTTTCGCGCAAAAA
TGGCTCTCCAGCCACAACTACAAAATTACAGTCCCTCCTGAGTTTATCAAAACCGAGAGGAAGCAGCATATCGTG
GCTAATTTGCTCGCCGTGAATCCTGACGGGAAGTCTGGCAGTCAATTGCGGTTTCGGGAAGATATCACGGTTCCC
TTGACTCCGAATGCTACCAAGGCACTGGATGAACTGAAGGAAATTCTGTACGGTGGTGGCGCCCGGGATGAGACT
CTCCACCTCACACCCCAGTGTCTTCTCCAAGGATCAATTATCCTGATGGATAATCGCCGATGGCTGCATTCGCGC
AATGAAGTCAAAGACCCCAACCGACATCTTCGGCGTGTCCGATGGGATGCCGCACCATTTGGAAGCTCATGA
Transcript >Pro_DTO377G3_2|g5308.t1
ATGCATCAACTCTTCCGTGCTGTTTCTACAGCCAGACTGACGGCAAGTTATTCTACCCGCCCTATCAGAGATTTA
CGAACCTCCAATCTCGTCCCCCTAATCGAAATTCCCAAGCCAGCACTCGCCTCCGACGCCTCCCACTTGAGAGCC
GTATACGATACCCTCGAAGCGAAAGGTGTGCTCCAAGTACATCTAGGGTTTAGCGACGAGAACAGCACATATCTG
CAGAGTCTGATATCGAATCTCCACAAAAACCACAACCACGGCCTCCCAATAACACACAGCGCCGAGCGCGGTTGG
TTCTGGGATGTTCGGCCCTCCCCAGCGAGTTTCCAAAGCCATGGCCACCAAGCCCGATCAGAGACAATGTTCCGA
TTTGAATGGCACACCGACTGCAGCTATGAAGAGCAACCACCCAGATTCTTCGCCCTCCAAGTCCTTCAGCCAGAC
CGCCGCGGCGGCGGGACGTTGTCTGTGCTGAACGTCGATCGACTCCTTACCTTGCTTTCGCCTTTCGCGCAAAAA
TGGCTCTCCAGCCACAACTACAAAATTACAGTCCCTCCTGAGTTTATCAAAACCGAGAGGAAGCAGCATATCGTG
GCTAATTTGCTCGCCGTGAATCCTGACGGGAAGTCTGGCAGTCAATTGCGGTTTCGGGAAGATATCACGGTTCCC
TTGACTCCGAATGCTACCAAGGCACTGGATGAACTGAAGGAAATTCTGTACGGTGGTGGCGCCCGGGATGAGACT
CTCCACCTCACACCCCAGTGTCTTCTCCAAGGATCAATTATCCTGATGGATAATCGCCGATGGCTGCATTCGCGC
AATGAAGTCAAAGACCCCAACCGACATCTTCGGCGTGTCCGATGGGATGCCGCACCATTTGGAAGCTCATGA
Gene >Pro_DTO377G3_2|g5308.t1
ATGCATCAACTCTTCCGTGCTGTTTCTACAGCCAGACTGACGGCAAGTTATTCTACCCGCCCTATCAGTATGTAT
CGTCTGTTATTTTCTTCTTCTCATACTCACTATAACAGGAGATTTACGAACCTCCAATCTCGTCCCCCTAATCGA
AATTCCCAAGCCAGCACTCGCCTCCGACGCCTCCCACTTGAGAGCCGTATACGATACCCTCGAAGCGAAAGGTGT
GCTCCAAGTACATCTAGGGTTTAGCGACGAGAACAGCACATATCTGCAGAGTCTGATATCGAATCTCCACAAAAA
CCACAACCACGGCCTCCCAATAACACACAGCGCCGAGCGCGGTTGGTTCTGGGATGTTCGGCCCTCCCCAGCGAG
TTTCCAAAGCCATGGCCACCAAGCCCGATCAGAGACAATGTTCCGATTTGAATGGCACACCGACTGCAGCTATGA
AGAGCAACCACCCAGATTCTTCGCCCTCCAAGTCCTTCAGCCAGACCGCCGCGGCGGCGGGACGTTGTCTGTGCT
GAACGTCGATCGACTCCTTACCTTGCTTTCGCCTTTCGCGCAAAAATGGCTCTCCAGCCACAACTACAAAATTAC
AGTCCCTCCTGAGTTTATCAAAACCGAGAGGAAGCAGCATATCGTGGCTAATTTGCTCGCCGTGAATCCTGACGG
GAAGTCTGGCAGTCAATTGCGGTTTCGGGAAGATATCACGGTTCCCTTGACTCCGAATGCTACCAAGGCACTGGA
TGAACTGAAGGAAATTCTGTACGGTGGTGGCGCCCGGGATGAGACTCTCCACCTCACACCCCAGTGTCTTCTCCA
AGGATCAATTATCCTGATGGATAATCGCCGATGGCTGCATTCGCGCAATGAAGTCAAAGACCCCAACCGACATCT
TCGGCGTGTCCGATGGGATGCCGCACCATTTGGAAGCTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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