Protein ID | Pro_DTO377G3_2|g5296.t1 |
Gene name | |
Location | scaffold_12:417381..420289 |
Strand | - |
Gene length (bp) | 2908 |
Transcript length (bp) | 2748 |
Coding sequence length (bp) | 2748 |
Protein length (aa) | 916 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04811 | Sec23_trunk | Sec23/Sec24 trunk domain | 5.5E-72 | 309 | 550 |
PF04815 | Sec23_helical | Sec23/Sec24 helical domain | 4.7E-23 | 650 | 751 |
PF08033 | Sec23_BS | Sec23/Sec24 beta-sandwich domain | 1.1E-16 | 556 | 639 |
PF04810 | zf-Sec23_Sec24 | Sec23/Sec24 zinc finger | 2.5E-16 | 235 | 272 |
PF00626 | Gelsolin | Gelsolin repeat | 1.1E-09 | 781 | 846 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0030127 | COPII vesicle coat | Yes |
GO:0006886 | intracellular protein transport | Yes |
GO:0008104 | protein localization | No |
GO:0044464 | cell part | No |
GO:0048193 | Golgi vesicle transport | No |
GO:0046872 | metal ion binding | No |
GO:0045184 | establishment of protein localization | No |
GO:0044446 | intracellular organelle part | No |
GO:0051649 | establishment of localization in cell | No |
GO:0044444 | cytoplasmic part | No |
GO:0046907 | intracellular transport | No |
GO:0051234 | establishment of localization | No |
GO:0030120 | vesicle coat | No |
GO:0051179 | localization | No |
GO:0051641 | cellular localization | No |
GO:0071702 | organic substance transport | No |
GO:0042886 | amide transport | No |
GO:0016192 | vesicle-mediated transport | No |
GO:0098796 | membrane protein complex | No |
GO:0003674 | molecular_function | No |
GO:0044433 | cytoplasmic vesicle part | No |
GO:0044425 | membrane part | No |
GO:0044424 | intracellular part | No |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0015031 | protein transport | No |
GO:0044422 | organelle part | No |
GO:0043167 | ion binding | No |
GO:0071705 | nitrogen compound transport | No |
GO:0008150 | biological_process | No |
GO:0030117 | membrane coat | No |
GO:0032991 | protein-containing complex | No |
GO:0006810 | transport | No |
GO:0005575 | cellular_component | No |
GO:0033036 | macromolecule localization | No |
GO:0015833 | peptide transport | No |
GO:0046914 | transition metal ion binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5296.t1 MAAPQGGFPPQEGYAQPAYGTPEPTQSPVYGQGAPAPAAGGKKKRAYAGEAFDFGSGANAALGGQPTAGGAYGAY PPQPQVVGYQQPAYGADPNMMQPAAYGAPVSADVSQMTQQFGGMGMSEPHHMPPPQPVAQAPMRPQVQLNQLYPT DLRSQPFNVAELDYPPPPIILPPGTSVYPSEANCPTKYMRSTLNAVPTTNSLLKKSKLPFALVIQPYASLHDAED PIPVIPDQVISRCRRCRSYINPFVTFLDHGHRWRCNMCNLTNDVPQAFDWDATLQKPADRELRADLNHSMVEFVA PQEYMVRPPQPLVYLFLIDVSYASVTNGLLATTARTIQESLDRIPNADRRTRLGFIAVDSSLHYFSIPRDDSESS EPRMLVVSDLDEPFLPIPGDLLVTLSECRENIEIFLRKLQEMFQNTQNNSCAMGAALRAGYMLISPVGGKMTVLS SSLPNTGHGALTMREDKKVLGTSKESSLLQTANSFYKSFAVECSKSQVSVDMFLFSSQYQDVASLSCLPRYTGGQ TYFYPGWNAARSEDAMKFAREFSDYLSSEIGLEAVLRVRATTGLRMSTFYGNFFNRSSDLCAFPAFPRDQAYVVE VAIDETVTKPVVCMQAAVLHTTCNGERRIRVLTLALPTTQNLADVFASADQQAIATFFSHKAVERTLSSGLEPAR EALQAKIVELLQTYRKELAGGSVSGGGLQFPANLRALPVLFLAMIKNLGLRKSAQIPTDMRSAALCLLSTLPLPL LIQYIYPRMYSLHDMPDNAGVPDPQTGEILLPPAVNLSSARLVPYGLYLIDDGQTQFLWVGRDAVSQLIEDVFGV PDKSQLRVGKQTLPDVENEFNQRVRAVVEKSRDHRAKGVGSIIVPHLYVVREDGEPGLRLWAQTMLVEDRADQSV SLDQWMGSLQEKVVQ* |
Coding | >Pro_DTO377G3_2|g5296.t1 ATGGCAGCACCACAAGGGGGCTTCCCCCCTCAGGAAGGCTATGCCCAGCCCGCCTACGGCACCCCAGAACCCACA CAATCCCCGGTATATGGGCAAGGCGCACCCGCACCAGCTGCAGGCGGAAAGAAGAAGAGAGCGTACGCTGGTGAG GCATTTGATTTCGGTTCTGGCGCCAATGCCGCGCTAGGTGGACAACCCACGGCTGGGGGTGCTTACGGGGCCTAT CCTCCACAGCCCCAAGTTGTAGGGTATCAACAACCCGCCTACGGTGCGGACCCCAACATGATGCAGCCCGCAGCA TACGGCGCACCTGTTTCCGCAGATGTCTCGCAGATGACCCAGCAATTCGGTGGAATGGGCATGAGCGAGCCTCAT CACATGCCACCCCCGCAGCCCGTGGCCCAAGCCCCTATGCGACCTCAAGTCCAGCTCAACCAGCTTTACCCCACG GATCTTCGATCCCAACCTTTCAACGTCGCTGAGCTGGACTATCCCCCTCCTCCAATTATTTTACCCCCGGGAACC AGTGTTTACCCGTCGGAAGCCAATTGCCCTACGAAATATATGCGATCTACGCTCAACGCTGTCCCCACAACCAAC TCACTCCTGAAGAAATCAAAGTTGCCCTTCGCCCTTGTCATTCAACCGTATGCTTCTCTTCACGACGCCGAGGAC CCTATCCCTGTGATTCCAGACCAAGTCATCTCACGATGCCGACGTTGTCGCTCTTATATCAACCCCTTCGTTACC TTCCTCGACCATGGCCACCGCTGGCGTTGTAACATGTGCAACCTGACGAACGACGTGCCACAAGCCTTCGATTGG GATGCTACACTGCAAAAGCCCGCCGACCGTGAGCTCCGTGCCGATCTCAACCACAGCATGGTCGAATTCGTTGCG CCGCAGGAATACATGGTCCGACCACCTCAACCGCTGGTTTACCTCTTCTTGATCGATGTAAGTTATGCATCGGTG ACCAACGGTCTTTTGGCCACTACCGCTCGCACCATCCAAGAGAGCCTCGATCGTATCCCGAACGCAGATCGGCGT ACTCGCCTCGGTTTTATTGCAGTGGACTCAAGCTTGCACTACTTCAGCATTCCTCGAGACGATTCCGAGTCTTCG GAGCCCCGGATGTTGGTTGTCAGTGATCTGGACGAGCCTTTCCTTCCCATCCCTGGTGATCTCCTGGTGACGCTG AGCGAATGCCGGGAGAACATTGAGATATTCCTCCGCAAGCTGCAAGAAATGTTCCAGAACACCCAAAACAACAGC TGCGCCATGGGTGCGGCATTGCGAGCTGGTTACATGTTGATCTCCCCCGTTGGTGGAAAGATGACTGTTCTGAGC TCATCTTTGCCTAACACTGGTCACGGAGCGCTCACTATGAGAGAAGACAAGAAGGTGCTGGGCACCAGCAAGGAA TCGAGTCTGCTTCAAACCGCAAACTCTTTCTACAAGAGCTTTGCAGTTGAATGTTCAAAATCACAAGTCTCCGTG GATATGTTCCTCTTCTCATCGCAATACCAAGATGTGGCCTCGTTGAGCTGCTTGCCCCGCTACACTGGTGGTCAA ACCTACTTCTACCCTGGCTGGAACGCTGCACGAAGTGAAGATGCCATGAAGTTCGCCCGTGAGTTCTCTGACTAC CTCTCTTCGGAGATTGGTCTGGAGGCCGTCCTCCGCGTGCGCGCAACAACCGGTCTGCGTATGAGCACCTTTTAC GGCAACTTCTTTAACCGTAGTTCCGATCTCTGTGCTTTCCCGGCCTTCCCTCGTGACCAGGCCTACGTGGTCGAG GTGGCCATTGATGAGACAGTTACAAAGCCGGTCGTCTGCATGCAGGCGGCTGTCCTCCACACTACCTGCAACGGT GAACGTCGTATCCGTGTCTTGACCCTGGCGCTTCCAACGACCCAGAACCTGGCAGACGTCTTCGCCTCGGCTGAC CAGCAGGCCATTGCCACATTCTTCAGCCACAAGGCTGTCGAGCGCACATTGAGCAGCGGTCTCGAGCCCGCTCGT GAGGCTCTTCAGGCTAAGATCGTAGAGCTTCTGCAGACCTACCGCAAGGAGCTCGCAGGTGGTAGCGTTAGCGGC GGTGGCCTCCAGTTCCCTGCCAACTTGCGAGCCTTGCCTGTCCTATTCCTTGCAATGATCAAGAACCTTGGTCTT CGCAAATCCGCCCAGATTCCCACGGACATGCGGTCCGCAGCTCTCTGCCTTCTCTCGACCCTACCCCTGCCGCTC CTCATCCAATATATCTACCCGAGAATGTACTCACTCCATGACATGCCCGACAATGCGGGTGTGCCTGATCCACAG ACCGGCGAAATCCTCTTGCCCCCTGCTGTCAACTTGTCTTCGGCTCGCCTCGTGCCTTACGGCCTGTACCTCATC GACGATGGCCAGACCCAGTTCCTCTGGGTTGGCCGCGATGCTGTTTCGCAGCTCATCGAGGATGTCTTTGGCGTC CCTGACAAGTCGCAGTTGCGGGTGGGCAAGCAAACCCTCCCCGACGTCGAGAACGAGTTCAACCAGCGTGTGCGG GCCGTAGTTGAGAAGAGTCGGGACCACCGGGCCAAGGGTGTGGGCAGCATTATCGTGCCTCACCTGTACGTCGTT CGCGAAGATGGTGAACCCGGTCTGCGTCTCTGGGCTCAGACGATGCTGGTGGAGGACCGTGCCGACCAAAGCGTC AGCTTGGATCAGTGGATGGGTTCCTTGCAAGAGAAGGTCGTGCAGTAA |
Transcript | >Pro_DTO377G3_2|g5296.t1 ATGGCAGCACCACAAGGGGGCTTCCCCCCTCAGGAAGGCTATGCCCAGCCCGCCTACGGCACCCCAGAACCCACA CAATCCCCGGTATATGGGCAAGGCGCACCCGCACCAGCTGCAGGCGGAAAGAAGAAGAGAGCGTACGCTGGTGAG GCATTTGATTTCGGTTCTGGCGCCAATGCCGCGCTAGGTGGACAACCCACGGCTGGGGGTGCTTACGGGGCCTAT CCTCCACAGCCCCAAGTTGTAGGGTATCAACAACCCGCCTACGGTGCGGACCCCAACATGATGCAGCCCGCAGCA TACGGCGCACCTGTTTCCGCAGATGTCTCGCAGATGACCCAGCAATTCGGTGGAATGGGCATGAGCGAGCCTCAT CACATGCCACCCCCGCAGCCCGTGGCCCAAGCCCCTATGCGACCTCAAGTCCAGCTCAACCAGCTTTACCCCACG GATCTTCGATCCCAACCTTTCAACGTCGCTGAGCTGGACTATCCCCCTCCTCCAATTATTTTACCCCCGGGAACC AGTGTTTACCCGTCGGAAGCCAATTGCCCTACGAAATATATGCGATCTACGCTCAACGCTGTCCCCACAACCAAC TCACTCCTGAAGAAATCAAAGTTGCCCTTCGCCCTTGTCATTCAACCGTATGCTTCTCTTCACGACGCCGAGGAC CCTATCCCTGTGATTCCAGACCAAGTCATCTCACGATGCCGACGTTGTCGCTCTTATATCAACCCCTTCGTTACC TTCCTCGACCATGGCCACCGCTGGCGTTGTAACATGTGCAACCTGACGAACGACGTGCCACAAGCCTTCGATTGG GATGCTACACTGCAAAAGCCCGCCGACCGTGAGCTCCGTGCCGATCTCAACCACAGCATGGTCGAATTCGTTGCG CCGCAGGAATACATGGTCCGACCACCTCAACCGCTGGTTTACCTCTTCTTGATCGATGTAAGTTATGCATCGGTG ACCAACGGTCTTTTGGCCACTACCGCTCGCACCATCCAAGAGAGCCTCGATCGTATCCCGAACGCAGATCGGCGT ACTCGCCTCGGTTTTATTGCAGTGGACTCAAGCTTGCACTACTTCAGCATTCCTCGAGACGATTCCGAGTCTTCG GAGCCCCGGATGTTGGTTGTCAGTGATCTGGACGAGCCTTTCCTTCCCATCCCTGGTGATCTCCTGGTGACGCTG AGCGAATGCCGGGAGAACATTGAGATATTCCTCCGCAAGCTGCAAGAAATGTTCCAGAACACCCAAAACAACAGC TGCGCCATGGGTGCGGCATTGCGAGCTGGTTACATGTTGATCTCCCCCGTTGGTGGAAAGATGACTGTTCTGAGC TCATCTTTGCCTAACACTGGTCACGGAGCGCTCACTATGAGAGAAGACAAGAAGGTGCTGGGCACCAGCAAGGAA TCGAGTCTGCTTCAAACCGCAAACTCTTTCTACAAGAGCTTTGCAGTTGAATGTTCAAAATCACAAGTCTCCGTG GATATGTTCCTCTTCTCATCGCAATACCAAGATGTGGCCTCGTTGAGCTGCTTGCCCCGCTACACTGGTGGTCAA ACCTACTTCTACCCTGGCTGGAACGCTGCACGAAGTGAAGATGCCATGAAGTTCGCCCGTGAGTTCTCTGACTAC CTCTCTTCGGAGATTGGTCTGGAGGCCGTCCTCCGCGTGCGCGCAACAACCGGTCTGCGTATGAGCACCTTTTAC GGCAACTTCTTTAACCGTAGTTCCGATCTCTGTGCTTTCCCGGCCTTCCCTCGTGACCAGGCCTACGTGGTCGAG GTGGCCATTGATGAGACAGTTACAAAGCCGGTCGTCTGCATGCAGGCGGCTGTCCTCCACACTACCTGCAACGGT GAACGTCGTATCCGTGTCTTGACCCTGGCGCTTCCAACGACCCAGAACCTGGCAGACGTCTTCGCCTCGGCTGAC CAGCAGGCCATTGCCACATTCTTCAGCCACAAGGCTGTCGAGCGCACATTGAGCAGCGGTCTCGAGCCCGCTCGT GAGGCTCTTCAGGCTAAGATCGTAGAGCTTCTGCAGACCTACCGCAAGGAGCTCGCAGGTGGTAGCGTTAGCGGC GGTGGCCTCCAGTTCCCTGCCAACTTGCGAGCCTTGCCTGTCCTATTCCTTGCAATGATCAAGAACCTTGGTCTT CGCAAATCCGCCCAGATTCCCACGGACATGCGGTCCGCAGCTCTCTGCCTTCTCTCGACCCTACCCCTGCCGCTC CTCATCCAATATATCTACCCGAGAATGTACTCACTCCATGACATGCCCGACAATGCGGGTGTGCCTGATCCACAG ACCGGCGAAATCCTCTTGCCCCCTGCTGTCAACTTGTCTTCGGCTCGCCTCGTGCCTTACGGCCTGTACCTCATC GACGATGGCCAGACCCAGTTCCTCTGGGTTGGCCGCGATGCTGTTTCGCAGCTCATCGAGGATGTCTTTGGCGTC CCTGACAAGTCGCAGTTGCGGGTGGGCAAGCAAACCCTCCCCGACGTCGAGAACGAGTTCAACCAGCGTGTGCGG GCCGTAGTTGAGAAGAGTCGGGACCACCGGGCCAAGGGTGTGGGCAGCATTATCGTGCCTCACCTGTACGTCGTT CGCGAAGATGGTGAACCCGGTCTGCGTCTCTGGGCTCAGACGATGCTGGTGGAGGACCGTGCCGACCAAAGCGTC AGCTTGGATCAGTGGATGGGTTCCTTGCAAGAGAAGGTCGTGCAGTAA |
Gene | >Pro_DTO377G3_2|g5296.t1 ATGGCAGCACCACAAGGGGGCTTCCCCCCTCAGGAAGGCTATGCCCAGCCCGCCTACGGCACCCCAGAACCCACA CAATCCCCGGTATATGGGCAAGGCGCACCCGCACCAGCTGCAGGCGGAAAGAAGAAGAGAGCGTACGCTGGTGAG GCATTTGATTTCGGTTCTGGCGCCAATGCCGCGCTAGGTGGACAACCCACGGCTGGGGGTGCTTACGGGGCCTAT CCTCCACAGCCCCAAGTTGTAGGGTATCAACAACCCGCCTACGGTGCGGACCCCAACATGATGCAGCCCGCAGCA TACGGCGCACCTGTTTCCGCAGATGTCTCGCAGATGACCCAGCAATTCGGTGGAATGGGCATGAGCGAGCCTCAT CACATGCCACCCCCGCAGCCCGTGGCCCAAGCCCCTATGCGACCTCAAGTCCAGCTCAACCAGCTTTACCCCACG GATCTTCGATCCCAACCTTTCAACGTCGCTGAGCTGGACTATCCCCCTCCTCCAATTATTTTACCCCCGGGAGTA CGTATAGATGCCATGTTGCGCATATGGTTGATATGCTTACAATCGACAGACCAGTGTTTACCCGTCGGAAGCCAA TTGCCCTACGAAATATATGCGATCTACGCTCAACGCTGTCCCCACAACCAACTCACTCCTGAAGAAATCAAAGTT GCCCTTCGCCCTTGTCATTCAACCGTATGCTTCTCTTCACGACGCCGAGGACCCTATCCCTGTGATTCCAGACCA AGTCATCTCACGATGCCGACGTTGTCGCTCTTATATCAACCCCTTCGTTACCTTCCTCGACCATGGCCACCGCTG GCGTTGTAACATGTGCAACCTGACGAACGACGTGCCACAAGCCTTCGATTGGGATGCTACACTGCAAAAGCCCGC CGACCGTGAGCTCCGTGCCGATCTCAACCACAGCATGGTCGAATTCGTTGCGCCGCAGGAATACATGGTCCGACC ACCTCAACCGCTGGTTTACCTCTTCTTGATCGATGTAAGTTATGCATCGGTGACCAACGGTCTTTTGGCCACTAC CGCTCGCACCATCCAAGAGAGCCTCGATCGTATCCCGAACGCAGATCGGCGTACTCGCCTCGGTTTTATTGCAGT GGACTCAAGCTTGCACTACTTCAGCATTCCTCGAGACGATTCCGAGTCTTCGGAGCCCCGGATGTTGGTTGTCAG TGATCTGGACGAGCCTTTCCTTCCCATCCCTGGTGATCTCCTGGTGACGCTGAGCGAATGCCGGGAGAACATTGA GATATTCCTCCGCAAGCTGCAAGAAATGTTCCAGAACACCCAAAACAACAGCTGCGCCATGGGTGCGGCATTGCG AGCTGGTTACATGTTGATCTCCCCCGTTGGTGGAAAGATGACTGTTCTGAGCTCATCTTTGCCTAACACTGGTCA CGGAGCGCTCACTATGAGAGAAGACAAGAAGGTGCTGGGCACCAGCAAGGAATCGAGTCTGCTTCAAACCGCAAA CTCTTTCTACAAGAGCTTTGCAGTTGAATGTTCAAAATCACAAGTCTCCGTGGATATGTTCCTCTTCTCATCGCA ATACCAAGATGTGGCCTCGTTGAGCTGCTTGCCCCGCTACACTGGTGGTCAAACCTACTTCTACCCTGGCTGGAA CGCTGCACGAAGTGAAGATGCCATGAAGTTCGCCCGTGAGTTCTCTGACTACCTCTCTTCGGAGATTGGTCTGGA GGCCGTCCTCCGCGTGCGCGCAACAACCGGTCTGCGTATGAGCACCTTTTACGGCAACTTCTTTAACCGTAGTTC CGATCTCTGTGCTTTCCCGGCCTTCCCTCGTGACCAGGCCTACGTGGTCGAGGTGGCCATTGATGAGACAGTTAC AAAGCCGGTCGTCTGCATGCAGGCGGCTGTCCTCCACACTACCTGCAACGGTGAACGTCGTATCCGTGTCTTGAC CCTGGCGCTTCCAACGACCCAGAACCTGGCAGACGTCTTCGCCTCGGCTGACCAGCAGGCCATTGCCACATTCTT CAGCCACAAGGCTGTCGAGCGCACATTGAGCAGCGGTCTCGAGCCCGCTCGTGAGGCTCTTCAGGCTAAGATCGT AGAGCTTCTGCAGACCTACCGCAAGGAGCTCGCAGGTGGTAGCGTTAGCGGCGGTGGCCTCCAGTTCCCTGCCAA CTTGCGAGCCTTGCCTGTCCTATTCCTTGCAATGATCAAGAACGTGAGTTTTATCTTTGGTTGTGATAGCTGTTC TATACTAATCGAGTATTTAGCTTGGTCTTCGCAAATCCGCCCAGATTCCCACGGACATGCGGTCCGCAGCTCTCT GCCTTCTCTCGACCCTACCCCTGCCGCTCCTCATCCAATATATCTACCCGAGAATGTACTCACTCCATGACATGC CCGACAATGCGGGTGTGCCTGATCCACAGACCGGCGAAATCCTCTTGCCCCCTGCTGTCAACTTGTCTTCGGCTC GCCTCGTGCCTTACGGCCTGTACCTCATCGACGATGGCCAGACCCAGTTCCTCTGGGTTGGCCGCGATGCTGTTT CGCAGCTCATCGAGGATGTCTTTGGCGTCCCTGACAAGTCGCAGTTGCGGGTGGGCAAGCAAACCCTCCCCGACG TCGAGAACGAGTTCAACCAGCGTGTGCGGGCCGTAGTTGAGAAGAGTCGGGACCACCGGGCCAAGGGTGTGGGCA GCATTATCGTGCCTCACCTGTACGTCGTTCGCGAAGATGGTGAACCCGGTCTGCGTCTCTGGGCTCAGACGATGC TGGTGGAGGACCGTGCCGACCAAAGCGTCAGCTTGGATCAGTGGATGGGTTCCTTGCAAGAGAAGGTTTGAGCCC TCTGCTCTGGCCATAGTATCGGTCAGCACTGACGATTTGCTCGCAGGTCGTGCAGTAA |