Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g5292.t1
Gene name
Location	scaffold_12:408598..410119
Strand	+
Gene length (bp)	1521
Transcript length (bp)	1149
Coding sequence length (bp)	1149
Protein length (aa)	383

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05368	NmrA	NmrA-like family	3.7E-16	58	283
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	6.1E-14	58	170
PF13460	NAD_binding_10	NAD(P)H-binding	9.1E-13	61	194
PF01073	3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	1.5E-10	59	172
PF16363	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	1.3E-07	59	169

GO

GO Term	Description	Terminal node
GO:0006694	steroid biosynthetic process	Yes
GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	Yes
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Yes
GO:0009058	biosynthetic process	No
GO:0003824	catalytic activity	No
GO:0008202	steroid metabolic process	No
GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	No
GO:0008150	biological_process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0008152	metabolic process	No
GO:0006629	lipid metabolic process	No
GO:0003674	molecular_function	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	No
GO:0016491	oxidoreductase activity	No
GO:1901576	organic substance biosynthetic process	No
GO:0016229	steroid dehydrogenase activity	No
GO:0044238	primary metabolic process	No
GO:0008610	lipid biosynthetic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5292.t1 MQKSRTINTALGARPFVPVPRVQPQFQRNLQDVRITRTGKPVIKVQGGRSSIGGHTATVFGATGFLGRYIVNKLA RQGCTVVIPYREEMAKRHLKVTGDLGRVVFMEYDLRNTQSIEESVRHSDVVYNLVGRQYPTKNFSYEDVHVDGVE RIADAVAKYDVDRFIHVSSYNARRDSPSEFFATKGWGEEIVRKIYPETTIVRPAPMFGFEDNLLHRLAKMGNVLT ANHMNERYWPVHAIDVGSALEAMLHDDSTAGQTFELYGPKNYSTAEIAQLVDREIIKKRRHINVPKALLKPFAHY ANKFLWWHTLSADEVEREFIDQVIDPTAKTFKDLGMNETADLANLTFHYLQAYRSASYYDLPPSTERERREDKRY VHVLDDQ*
Coding	>Pro_DTO377G3_2\|g5292.t1 ATGCAGAAGTCTCGCACTATCAACACTGCCCTGGGCGCCCGGCCTTTTGTGCCAGTTCCGCGGGTGCAGCCCCAG TTCCAGCGCAACCTTCAGGATGTCCGCATCACCCGGACTGGCAAGCCCGTTATAAAGGTCCAAGGTGGCCGGTCT TCCATTGGAGGTCACACCGCGACGGTCTTTGGTGCTACTGGTTTCCTCGGTCGCTATATTGTCAACAAGCTTGCT CGCCAGGGATGTACCGTTGTCATTCCCTACCGCGAGGAGATGGCAAAGCGACACTTGAAGGTCACTGGTGATCTT GGCAGAGTTGTGTTCATGGAATACGACCTGCGCAACACACAGTCCATTGAGGAGAGTGTTCGTCACTCCGATGTT GTCTACAACCTTGTCGGTCGCCAATATCCCACCAAGAACTTCTCATACGAGGATGTCCACGTCGATGGTGTCGAG CGTATTGCCGATGCTGTTGCCAAGTACGATGTCGACCGTTTCATCCACGTTTCCTCCTACAACGCTCGCCGTGAC TCGCCTTCCGAGTTCTTTGCCACCAAGGGATGGGGTGAGGAGATTGTCCGCAAGATCTACCCCGAGACCACAATC GTGCGACCTGCACCAATGTTCGGTTTCGAGGACAACCTGCTCCACAGATTGGCCAAGATGGGCAATGTCTTGACC GCCAACCACATGAACGAGCGCTACTGGCCTGTCCACGCCATTGATGTCGGTTCCGCTTTGGAGGCTATGCTGCAT GATGACAGCACCGCCGGCCAAACCTTCGAGTTGTACGGCCCCAAGAACTACTCCACCGCCGAAATCGCCCAGTTG GTCGACCGTGAAATCATCAAGAAGCGCCGTCACATCAACGTCCCCAAGGCTCTCCTCAAGCCCTTCGCGCACTAC GCCAACAAGTTCCTGTGGTGGCACACCCTGTCCGCCGACGAGGTGGAGCGCGAGTTCATTGACCAGGTGATTGAC CCGACCGCCAAGACCTTCAAGGACCTCGGTATGAACGAGACCGCCGATCTGGCCAACTTGACCTTCCACTACCTG CAGGCCTACCGTAGTGCCTCTTACTACGATCTGCCTCCTTCTACGGAGCGTGAGCGCCGGGAGGACAAGCGGTAC GTGCATGTGCTGGACGACCAGTAG
Transcript	>Pro_DTO377G3_2\|g5292.t1 ATGCAGAAGTCTCGCACTATCAACACTGCCCTGGGCGCCCGGCCTTTTGTGCCAGTTCCGCGGGTGCAGCCCCAG TTCCAGCGCAACCTTCAGGATGTCCGCATCACCCGGACTGGCAAGCCCGTTATAAAGGTCCAAGGTGGCCGGTCT TCCATTGGAGGTCACACCGCGACGGTCTTTGGTGCTACTGGTTTCCTCGGTCGCTATATTGTCAACAAGCTTGCT CGCCAGGGATGTACCGTTGTCATTCCCTACCGCGAGGAGATGGCAAAGCGACACTTGAAGGTCACTGGTGATCTT GGCAGAGTTGTGTTCATGGAATACGACCTGCGCAACACACAGTCCATTGAGGAGAGTGTTCGTCACTCCGATGTT GTCTACAACCTTGTCGGTCGCCAATATCCCACCAAGAACTTCTCATACGAGGATGTCCACGTCGATGGTGTCGAG CGTATTGCCGATGCTGTTGCCAAGTACGATGTCGACCGTTTCATCCACGTTTCCTCCTACAACGCTCGCCGTGAC TCGCCTTCCGAGTTCTTTGCCACCAAGGGATGGGGTGAGGAGATTGTCCGCAAGATCTACCCCGAGACCACAATC GTGCGACCTGCACCAATGTTCGGTTTCGAGGACAACCTGCTCCACAGATTGGCCAAGATGGGCAATGTCTTGACC GCCAACCACATGAACGAGCGCTACTGGCCTGTCCACGCCATTGATGTCGGTTCCGCTTTGGAGGCTATGCTGCAT GATGACAGCACCGCCGGCCAAACCTTCGAGTTGTACGGCCCCAAGAACTACTCCACCGCCGAAATCGCCCAGTTG GTCGACCGTGAAATCATCAAGAAGCGCCGTCACATCAACGTCCCCAAGGCTCTCCTCAAGCCCTTCGCGCACTAC GCCAACAAGTTCCTGTGGTGGCACACCCTGTCCGCCGACGAGGTGGAGCGCGAGTTCATTGACCAGGTGATTGAC CCGACCGCCAAGACCTTCAAGGACCTCGGTATGAACGAGACCGCCGATCTGGCCAACTTGACCTTCCACTACCTG CAGGCCTACCGTAGTGCCTCTTACTACGATCTGCCTCCTTCTACGGAGCGTGAGCGCCGGGAGGACAAGCGGTAC GTGCATGTGCTGGACGACCAGTAG
Gene	>Pro_DTO377G3_2\|g5292.t1 ATGCAGAAGTCTCGCACTATCAACACTGCCCTGGGCGCCCGGCCTTTTGTGCCAGTTCCGCGGGTGCAGCCCCAG TTCCAGCGCAACCTTCAGGATGTCCGCATCACCCGGACTGGCAAGCCCGTTATAAAGGTCCAAGGTGGCCGGTAA GCGATCAATGAAGCTGTGGTTAACTCTAATGTCCTGCTTACTGACGCGCTCTTCTATAGGTCTTCCATTGGAGGT AGCTAAGCCGTTCCAATTCGATGCTACGCTCGATCCCGATGTGCTCACGCAATTCTAGGTCACACCGCGACGGTC TTTGGTGCTACTGGTTTCCTCGGTCGCTATATTGTCAACAAGCTTGGTAGGTTGAGGTCTGATGCACTGCAATTG GACCGTAGACTAATAGTCCGCAGCTCGCCAGGGATGTACCGTTGTCATTCCCTACCGCGAGGAGATGGCAAAGCG ACACTTGAAGGTCACTGGTGATCTTGGCAGAGTTGTGTTCATGGTATGGAGCCGTATTACGCATATTTGTTGAAT GTGGAGTGTCTGACCCTGTATAGGAATACGACCTGCGCAACACACAGTCCATTGAGGAGAGTGTTCGTCACTCCG ATGTTGTCTACAACCTTGTCGGTCGCCAATATCCCACCAAGTGAGTTATGTGTGGTATACATGAATGAATACTTT CTGACGACCCAGGAACTTCTCATACGAGGATGTCCACGTCGATGGTGTCGAGCGTATTGCCGATGCTGTTGCCAA GTACGATGTCGACCGTTTCATCCACGTTTCCTCCTACAACGCTCGCCGTGACTCGCCTTCCGAGTTCTTTGCCAC CAAGGTCAGCATATCCACTGGAATACAAGAGCGAGAGTGCTGATAATGTATAGGGATGGGGTGAGGAGATTGTCC GCAAGATCTACCCCGAGACCACAATCGTGCGACCTGCACCAATGTTCGGTTTCGAGGACAACCTGCTCCACAGAT TGGCCAAGATGGGCAATGTCTTGACCGCCAACCACATGAACGAGCGCTACTGGCCTGTCCACGTAAGTTATTCTC CCGGCTGGACAAGCTATTGAACTAACCCTCTAGGCCATTGATGTCGGTTCCGCTTTGGAGGCTATGCTGCATGAT GACAGCACCGCCGGCCAAACCTTCGAGTTGTACGGCCCCAAGAACTACTCCACCGCCGAAATCGCCCAGTTGGTC GACCGTGAAATCATCAAGAAGCGCCGTCACATCAACGTCCCCAAGGCTCTCCTCAAGCCCTTCGCGCACTACGCC AACAAGTTCCTGTGGTGGCACACCCTGTCCGCCGACGAGGTGGAGCGCGAGTTCATTGACCAGGTGATTGACCCG ACCGCCAAGACCTTCAAGGACCTCGGTATGAACGAGACCGCCGATCTGGCCAACTTGACCTTCCACTACCTGCAG GCCTACCGTAGTGCCTCTTACTACGATCTGCCTCCTTCTACGGAGCGTGAGCGCCGGGAGGACAAGCGGTACGTG CATGTGCTGGACGACCAGTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences