Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5290.t1
Gene name
Locationscaffold_12:404360..406144
Strand+
Gene length (bp)1784
Transcript length (bp)1644
Coding sequence length (bp)1644
Protein length (aa) 548

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00650 CRAL_TRIO CRAL/TRIO domain 1.8E-42 287 433
PF03765 CRAL_TRIO_N CRAL/TRIO, N-terminal domain 2.5E-14 190 240
PF13716 CRAL_TRIO_2 Divergent CRAL/TRIO domain 1.7E-05 300 431

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5290.t1
MRGTILRRLYPSAKFPVARYSFARPFSTHPEPRKASSFWTLTFTLAVVGGGAWLQDRYFNPKDTITPQPQLSQEP
FLGVIDTLATMPAQLAPGTVGNLTPEQEVKLQEFWVLALKVFGLTFEELEAPVSAAPSEAPTPAPVQDKKKSKGR
WGIWSRGDDDETKSAPSSGAGTSIASISLADGDDKYGQSKEFKQALEDMKPEEIRTAFWNMVKGDNPDSLLLRFL
RARKWDIKKALVMLISTMRWRLLEMHVDDDIMFNGEALALKMSQGSDPIEKKKGEDFLTQIRLGKSFLHGVDRTG
RPICVVRVRLHRAGDQENEGLERFTVYTIETARLLLAPPIETATIIFDMTDFGMANMDYAPVKFMIKCFEANYPE
SLGAVLIHKAPWIFSSIWGVIKGWLDPVVAAKIHFTKNRQDLEQYIHPSQILKELEGDEDWEYKYVEVPENENPK
MADKETRDTLVAERQKLAKEIQDVTVEWISTSFKKKTDAASAAKEKRNSLIEQLRAQYWVLDPYVRARSLYDRLN
IVQGGGKINFYPGLEKGAETSA*
Coding >Pro_DTO377G3_2|g5290.t1
ATGCGTGGCACAATCCTACGTCGTCTCTATCCTTCGGCCAAGTTCCCTGTCGCCCGGTATTCATTCGCGCGACCA
TTTTCTACGCACCCAGAACCAAGAAAGGCTTCATCTTTCTGGACCCTTACATTTACTCTCGCTGTTGTCGGAGGA
GGCGCTTGGCTCCAGGACAGATACTTCAATCCCAAAGACACAATCACTCCGCAGCCCCAGCTGTCTCAAGAACCC
TTCCTCGGAGTAATCGATACGCTCGCGACGATGCCCGCCCAACTCGCCCCCGGAACAGTTGGGAACCTCACTCCG
GAGCAGGAAGTGAAGCTGCAAGAATTCTGGGTCCTGGCACTCAAAGTCTTCGGCCTCACATTCGAAGAACTCGAA
GCCCCCGTGTCTGCCGCCCCCAGTGAAGCCCCAACACCCGCCCCAGTCCAGGATAAGAAGAAGTCCAAGGGCCGG
TGGGGAATTTGGAGCCGCGGCGACGACGATGAGACGAAAAGCGCTCCCAGCAGCGGCGCCGGTACCAGCATAGCT
TCAATCAGTCTCGCCGACGGCGACGACAAGTACGGCCAGTCCAAGGAGTTCAAGCAAGCGCTGGAGGACATGAAG
CCCGAGGAGATCCGGACAGCGTTTTGGAACATGGTGAAGGGCGACAACCCGGATTCGCTGCTACTTCGGTTCCTG
CGGGCACGCAAGTGGGACATCAAGAAGGCGCTTGTTATGTTGATTTCTACGATGCGCTGGCGACTGCTGGAAATG
CATGTCGACGACGATATCATGTTCAACGGCGAGGCATTGGCTTTGAAGATGTCGCAGGGCTCCGATCCCATTGAG
AAGAAGAAGGGTGAGGACTTCCTGACGCAGATACGTCTCGGTAAGAGTTTCCTGCACGGTGTTGACCGGACTGGT
CGGCCGATCTGTGTTGTCCGCGTGCGCTTGCATCGGGCTGGTGATCAGGAGAATGAAGGATTGGAGCGCTTTACT
GTTTATACTATCGAGACTGCGCGTTTGTTGCTTGCGCCGCCGATCGAGACTGCGACTATTATCTTTGATATGACG
GACTTTGGTATGGCCAACATGGACTACGCCCCGGTCAAGTTCATGATCAAGTGCTTCGAAGCCAACTACCCCGAG
TCTCTCGGAGCAGTGCTCATCCACAAGGCCCCTTGGATCTTCTCAAGCATCTGGGGCGTTATCAAGGGCTGGCTC
GACCCAGTCGTCGCAGCGAAGATTCACTTCACGAAGAACCGTCAGGATCTCGAACAATACATCCACCCAAGCCAG
ATCTTGAAAGAGCTCGAAGGCGACGAAGACTGGGAATATAAATACGTCGAGGTGCCGGAGAACGAGAATCCCAAG
ATGGCCGACAAGGAAACGCGAGATACCCTGGTGGCCGAGCGCCAAAAGCTCGCCAAGGAGATCCAGGATGTCACC
GTTGAGTGGATCAGCACCAGCTTCAAAAAGAAGACCGACGCTGCCTCTGCTGCCAAGGAGAAGCGGAATAGCTTG
ATCGAGCAGCTGCGTGCGCAATACTGGGTTCTTGACCCGTATGTCCGGGCTCGCTCGCTCTATGACAGACTCAAT
ATCGTCCAGGGCGGTGGGAAGATTAACTTCTATCCTGGCTTGGAGAAGGGAGCAGAGACATCGGCATAA
Transcript >Pro_DTO377G3_2|g5290.t1
ATGCGTGGCACAATCCTACGTCGTCTCTATCCTTCGGCCAAGTTCCCTGTCGCCCGGTATTCATTCGCGCGACCA
TTTTCTACGCACCCAGAACCAAGAAAGGCTTCATCTTTCTGGACCCTTACATTTACTCTCGCTGTTGTCGGAGGA
GGCGCTTGGCTCCAGGACAGATACTTCAATCCCAAAGACACAATCACTCCGCAGCCCCAGCTGTCTCAAGAACCC
TTCCTCGGAGTAATCGATACGCTCGCGACGATGCCCGCCCAACTCGCCCCCGGAACAGTTGGGAACCTCACTCCG
GAGCAGGAAGTGAAGCTGCAAGAATTCTGGGTCCTGGCACTCAAAGTCTTCGGCCTCACATTCGAAGAACTCGAA
GCCCCCGTGTCTGCCGCCCCCAGTGAAGCCCCAACACCCGCCCCAGTCCAGGATAAGAAGAAGTCCAAGGGCCGG
TGGGGAATTTGGAGCCGCGGCGACGACGATGAGACGAAAAGCGCTCCCAGCAGCGGCGCCGGTACCAGCATAGCT
TCAATCAGTCTCGCCGACGGCGACGACAAGTACGGCCAGTCCAAGGAGTTCAAGCAAGCGCTGGAGGACATGAAG
CCCGAGGAGATCCGGACAGCGTTTTGGAACATGGTGAAGGGCGACAACCCGGATTCGCTGCTACTTCGGTTCCTG
CGGGCACGCAAGTGGGACATCAAGAAGGCGCTTGTTATGTTGATTTCTACGATGCGCTGGCGACTGCTGGAAATG
CATGTCGACGACGATATCATGTTCAACGGCGAGGCATTGGCTTTGAAGATGTCGCAGGGCTCCGATCCCATTGAG
AAGAAGAAGGGTGAGGACTTCCTGACGCAGATACGTCTCGGTAAGAGTTTCCTGCACGGTGTTGACCGGACTGGT
CGGCCGATCTGTGTTGTCCGCGTGCGCTTGCATCGGGCTGGTGATCAGGAGAATGAAGGATTGGAGCGCTTTACT
GTTTATACTATCGAGACTGCGCGTTTGTTGCTTGCGCCGCCGATCGAGACTGCGACTATTATCTTTGATATGACG
GACTTTGGTATGGCCAACATGGACTACGCCCCGGTCAAGTTCATGATCAAGTGCTTCGAAGCCAACTACCCCGAG
TCTCTCGGAGCAGTGCTCATCCACAAGGCCCCTTGGATCTTCTCAAGCATCTGGGGCGTTATCAAGGGCTGGCTC
GACCCAGTCGTCGCAGCGAAGATTCACTTCACGAAGAACCGTCAGGATCTCGAACAATACATCCACCCAAGCCAG
ATCTTGAAAGAGCTCGAAGGCGACGAAGACTGGGAATATAAATACGTCGAGGTGCCGGAGAACGAGAATCCCAAG
ATGGCCGACAAGGAAACGCGAGATACCCTGGTGGCCGAGCGCCAAAAGCTCGCCAAGGAGATCCAGGATGTCACC
GTTGAGTGGATCAGCACCAGCTTCAAAAAGAAGACCGACGCTGCCTCTGCTGCCAAGGAGAAGCGGAATAGCTTG
ATCGAGCAGCTGCGTGCGCAATACTGGGTTCTTGACCCGTATGTCCGGGCTCGCTCGCTCTATGACAGACTCAAT
ATCGTCCAGGGCGGTGGGAAGATTAACTTCTATCCTGGCTTGGAGAAGGGAGCAGAGACATCGGCATAA
Gene >Pro_DTO377G3_2|g5290.t1
ATGCGTGGCACAATCCTACGTCGTCTCTATCCTTCGGCCAAGTTCCCTGTCGCCCGGTATTCATTCGCGCGACCA
TTTTCTACGCACCCAGAACCAAGAAAGGCTTCATCTTTCTGGACCCTTACATTTACTCTCGCTGTTGTCGGAGGA
GGCGCTTGGCTCCAGGACAGATACTTCAATCCCAAAGACACAATCACTCCGCAGCCCCAGCTGTCTCAAGAACCC
TTCCTCGGAGTAATCGATACGCTCGCGACGATGCCCGCCCAACTCGCCCCCGGAACAGTTGGGAACCTCACTCCG
GAGCAGGAAGTGAAGCTGCAAGAATTCTGGGTCCTGGCACTCAAAGTCTTCGGCCTCACATTCGAAGAACTCGAA
GCCCCCGTGTCTGCCGCCCCCAGTGAAGCCCCAACACCCGCCCCAGTCCAGGATAAGAAGAAGTCCAAGGGCCGG
TGGGGAATTTGGAGCCGCGGCGACGACGATGAGACGAAAAGCGCTCCCAGCAGCGGCGCCGGTACCAGCATAGCT
TCAATCAGTCTCGCCGACGGCGACGACAAGTACGGCCAGTCCAAGGAGTTCAAGCAAGCGCTGGAGGACATGAAG
CCCGAGGAGATCCGGACAGCGTTTTGGAACATGGTGAAGGGCGACAACCCGGATTCGCTGCTACTTCGGTTCCTG
CGGGCACGCAAGTGGGACATCAAGAAGGCGCTTGTTATGTTGATTTCTACGATGCGCTGGCGACTGCTGGAAATG
CATGTCGACGACGATATCATGTTCAACGGCGAGGCATTGGCTTTGAAGATGTCGCAGGGCTCCGATCCCATTGAG
AAGAAGAAGGGTGAGGACTTCCTGACGCAGATACGTCTCGGTAAGAGTTTCCTGCACGGTGTTGACCGGACTGGT
CGGCCGATCTGTGTTGTCCGCGTGCGCTTGCATCGGGCTGGTGATCAGGAGAATGAAGGATTGGAGCGCTTTACT
GTTTATACTATCGAGACTGCGCGTTTGTTGCTTGCGCCGCCGATCGAGACTGCGGTAAGTATTCCGGTGTGCGGA
TTTTCTCTCGGGAGCTGACTCTTCAGACTATTATCTTTGATATGACGGACTTTGGTATGGCCAACATGGTAAGCT
TTCGTCTCTACGTGCTTGACACTATACTGATATCTCCAGGACTACGCCCCGGTCAAGTTCATGATCAAGTGCTTC
GAAGCCAACTACCCCGAGTCTCTCGGAGCAGTGCTCATCCACAAGGCCCCTTGGATCTTCTCAAGTTCGTATCCT
AGCACCATATATAAAACCCCTTTCTAACCAAACCAGGCATCTGGGGCGTTATCAAGGGCTGGCTCGACCCAGTCG
TCGCAGCGAAGATTCACTTCACGAAGAACCGTCAGGATCTCGAACAATACATCCACCCAAGCCAGATCTTGAAAG
AGCTCGAAGGCGACGAAGACTGGGAATATAAATACGTCGAGGTGCCGGAGAACGAGAATCCCAAGATGGCCGACA
AGGAAACGCGAGATACCCTGGTGGCCGAGCGCCAAAAGCTCGCCAAGGAGATCCAGGATGTCACCGTTGAGTGGA
TCAGCACCAGCTTCAAAAAGAAGACCGACGCTGCCTCTGCTGCCAAGGAGAAGCGGAATAGCTTGATCGAGCAGC
TGCGTGCGCAATACTGGGTTCTTGACCCGTATGTCCGGGCTCGCTCGCTCTATGACAGACTCAATATCGTCCAGG
GCGGTGGGAAGATTAACTTCTATCCTGGCTTGGAGAAGGGAGCAGAGACATCGGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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