Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5282.t1
Gene name
Locationscaffold_12:381428..382566
Strand-
Gene length (bp)1138
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5282.t1
MGLFRIDFLALWLLFLRLATAAVPVPTSDGYCFVYLIQGYDTCALIAKAHGITEADIESFNKNTWAWLGCGRLYQ
GDFICLSAGKPPMPMALPHATCGPQVPGTTRPAKWADLPGLNPCAESKCCAFWGQCGVSDLYCEGYRAPPAGPTA
TVKGATEAPTSEVTTKAKATGVQQSTKTGAGSKATSKSSTSSKSSTTGTTIIKATKITTTTKQTTTQKTTTQAAP
KASASQYSWTAPWEITLYSQANCQGDYYHLEGYNKEYLDDKGCLALHGGLNSKFTETGVTCKWWTSNSLTWTSCD
ASKLVKPESWLLKNGTEGIDPPTFAALECSINGY*
Coding >Pro_DTO377G3_2|g5282.t1
ATGGGTCTCTTTCGAATCGACTTCCTTGCTCTATGGCTTCTCTTCCTGCGTCTCGCGACAGCCGCCGTCCCGGTA
CCAACCAGCGACGGCTACTGCTTCGTCTATCTCATCCAGGGTTATGATACGTGTGCGCTGATTGCCAAAGCACAC
GGCATCACCGAGGCCGACATCGAGAGCTTCAATAAAAACACCTGGGCGTGGCTCGGATGCGGACGACTATACCAG
GGCGACTTCATTTGTCTCAGCGCTGGGAAACCGCCGATGCCAATGGCCCTTCCGCATGCAACCTGCGGCCCACAG
GTACCTGGCACAACACGTCCGGCAAAATGGGCCGACCTCCCTGGTTTGAACCCATGTGCTGAGTCCAAATGTTGT
GCGTTCTGGGGTCAATGTGGTGTCTCCGATTTATATTGCGAGGGTTACCGTGCACCTCCTGCCGGTCCTACAGCC
ACCGTGAAAGGGGCGACAGAGGCCCCGACGTCCGAAGTCACTACCAAGGCAAAGGCAACCGGAGTCCAGCAATCC
ACCAAGACCGGCGCAGGCTCAAAAGCTACCTCCAAATCCAGCACCAGCTCCAAGTCCAGCACTACCGGAACCACC
ATCATCAAAGCCACGAAAATCACTACAACAACTAAACAAACTACTACCCAAAAAACAACAACACAAGCCGCGCCT
AAAGCAAGCGCGTCTCAATATAGCTGGACGGCACCGTGGGAGATCACACTATACAGCCAAGCAAACTGCCAGGGC
GACTACTACCACCTCGAGGGCTATAACAAAGAATACCTCGACGACAAGGGCTGCTTGGCGCTCCATGGAGGCCTC
AATAGCAAGTTCACCGAGACAGGCGTGACCTGTAAATGGTGGACTTCTAATAGCCTCACGTGGACTAGTTGTGAT
GCGAGCAAACTTGTGAAACCCGAGTCGTGGCTGCTCAAGAATGGGACTGAGGGGATTGATCCGCCTACTTTTGCT
GCTTTGGAGTGTTCGATTAATGGATATTAA
Transcript >Pro_DTO377G3_2|g5282.t1
ATGGGTCTCTTTCGAATCGACTTCCTTGCTCTATGGCTTCTCTTCCTGCGTCTCGCGACAGCCGCCGTCCCGGTA
CCAACCAGCGACGGCTACTGCTTCGTCTATCTCATCCAGGGTTATGATACGTGTGCGCTGATTGCCAAAGCACAC
GGCATCACCGAGGCCGACATCGAGAGCTTCAATAAAAACACCTGGGCGTGGCTCGGATGCGGACGACTATACCAG
GGCGACTTCATTTGTCTCAGCGCTGGGAAACCGCCGATGCCAATGGCCCTTCCGCATGCAACCTGCGGCCCACAG
GTACCTGGCACAACACGTCCGGCAAAATGGGCCGACCTCCCTGGTTTGAACCCATGTGCTGAGTCCAAATGTTGT
GCGTTCTGGGGTCAATGTGGTGTCTCCGATTTATATTGCGAGGGTTACCGTGCACCTCCTGCCGGTCCTACAGCC
ACCGTGAAAGGGGCGACAGAGGCCCCGACGTCCGAAGTCACTACCAAGGCAAAGGCAACCGGAGTCCAGCAATCC
ACCAAGACCGGCGCAGGCTCAAAAGCTACCTCCAAATCCAGCACCAGCTCCAAGTCCAGCACTACCGGAACCACC
ATCATCAAAGCCACGAAAATCACTACAACAACTAAACAAACTACTACCCAAAAAACAACAACACAAGCCGCGCCT
AAAGCAAGCGCGTCTCAATATAGCTGGACGGCACCGTGGGAGATCACACTATACAGCCAAGCAAACTGCCAGGGC
GACTACTACCACCTCGAGGGCTATAACAAAGAATACCTCGACGACAAGGGCTGCTTGGCGCTCCATGGAGGCCTC
AATAGCAAGTTCACCGAGACAGGCGTGACCTGTAAATGGTGGACTTCTAATAGCCTCACGTGGACTAGTTGTGAT
GCGAGCAAACTTGTGAAACCCGAGTCGTGGCTGCTCAAGAATGGGACTGAGGGGATTGATCCGCCTACTTTTGCT
GCTTTGGAGTGTTCGATTAATGGATATTAA
Gene >Pro_DTO377G3_2|g5282.t1
ATGGGTCTCTTTCGAATCGACTTCCTTGCTCTATGGCTTCTCTTCCTGCGTCTCGCGACAGCCGCCGTCCCGGTA
CCAACCAGCGACGGCTACTGCTTCGTCTATCTCATCCAGGGTTATGATACGTGTGCGCTGATTGCCAAAGCACAC
GGCATCACCGAGGCCGACATCGAGAGCTTCAATAAAAACACCTGGGCGTGGCTCGGATGCGGACGACTATACCAG
GGCGACTTCATTTGTCTCAGCGCTGGGAAACCGCCGATGCCAATGGCCCTTCCGCATGCAACCTGCGGCCCACAG
GTACCTGGCACAACACGTCCGGCAAAATGGGCCGACCTCCCTGGTTTGAACCCATGTGCTGAGTCCAAATGTGTA
AGTAAAGTCCATATCCCCGTATAGATCTAGTCCTGACAACTACCAGTGTGCGTTCTGGGGTCAATGTGGTGTCTC
CGATTTATATTGCGAGGGTTACCGTGCACCTCCTGCCGGTCCTACAGCCACCGTGAAAGGGGCGACAGAGGCCCC
GACGTCCGAAGTCACTACCAAGGCAAAGGCAACCGGAGTCCAGCAATCCACCAAGACCGGCGCAGGCTCAAAAGC
TACCTCCAAATCCAGCACCAGCTCCAAGTCCAGCACTACCGGAACCACCATCATCAAAGCCACGAAAATCACTAC
AACAACTAAACAAACTACTACCCAAAAAACAACAACACAAGCCGCGCCTAAAGCAAGCGCGTCTCAATATAGCTG
GACGGCACCGTGGGAGATCACACTATACAGCCAAGCAAACTGCCAGGGCGACTACTACCACCTCGAGGGCTATAA
CAAAGAATACCTCGACGACAAGGGCTGCTTGGCGCTCCATGGAGGCCTCAATAGCAAGTTCACCGAGACAGGCGT
GACCTGTAAATGGTGGACTTCTAATAGCCTCACGTGGACTAGTTGTGATGCGAGCAAACTTGTGAAACCCGAGTC
GTGGCTGCTCAAGAATGGGTATTGCTCGATTTTTACTAAGACTGATTGTGATTGCTTTGATACTTGGAAGTTGTA
TTATCAGCCTAAAGGATGTCATAATAGGACTGAGGGGATTGATCCGCCTACTTTTGCTGCTTTGGAGTGTTCGAT
TAATGGATATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail