Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5270.t1
Gene name
Locationscaffold_12:349239..351898
Strand-
Gene length (bp)2659
Transcript length (bp)2448
Coding sequence length (bp)2448
Protein length (aa) 816

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12708 Pectate_lyase_3 Pectate lyase superfamily protein 8.6E-84 100 323
PF12708 Pectate_lyase_3 Pectate lyase superfamily protein 2.2E-14 451 567

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5270.t1
MYYSFVIKYFSLVACANAQLLEIPAVDAIVSSAMLPFEQYTSFGASTKTASAAVSFETKVAVVNSPVAAVAAADA
AYWLADIAHQGVAAFNSNPSGYQVFRNVKDYGAIGDGVTDDTAAINAAISAGGRFGPASRQSSTTTPAIVYFPSG
TYLISSSIIDYYFTQLIGNPNAMPVIKATAGFVGLGLIDGDQYQSDGNQGWTSTNVFFRQVRNLKLDLTSIPAGT
AATGIHWPTGQASSIENVVIAMSSASGTQHQGIFIENGSGGWLTDVVINGGLYGANIGNQQFTMRNLAISNSVTA
ISQIWNWGWTYQGLSLTNCTTAISISNGGAGAQLVGSVNILDSTIQNCPTFVDTAWQTSTLSTGSLILENIILNN
VPVAVKGVSGTVLAGSGASTTIAAWGQGHKYTPNGPTNFQGSFTAPTRPSALLAGGSNRYFTKSKPQYEQSPVAS
FVSIRSAGARGDGSTDDTTAIQSALTSAASAGKIVFFDQGTYKVTGTIYVPPGSRIVGEAYPVIMATGSVWSSIT
NPVPVVQIGKSGESGFVEWSDMIVSTAGSTPGAVLIEWNLAATSGAGMWDVHTRIGGFQGSQQQVAQCPTTAAVS
AGCEVGYMSMHITKVASGVYLENVWLWTADHDLESATNTQISVYTGRGLLVEGNNVWLYGTASEHHSLYQYQFSG
ASSIVAGFIQTETPYYQPNPNAANGPYPTNSALNDPDYSSCLGGNCDSLGLRILNTKDVIIYGAGLYSFFNNYST
TCSTFPLPEDCQSMIFSVEGSTSGLVVYGLNTVGTSYMIVKDGTALATVGDNLATFAATIAYFTF*
Coding >Pro_DTO377G3_2|g5270.t1
ATGTATTATTCTTTTGTGATCAAGTATTTCTCTTTGGTGGCTTGTGCCAATGCACAGCTACTAGAGATCCCCGCT
GTGGATGCTATAGTCAGCTCTGCCATGCTCCCTTTTGAGCAGTATACTTCCTTCGGTGCTTCAACAAAGACTGCC
TCGGCTGCTGTAAGCTTCGAGACCAAGGTCGCCGTGGTCAACTCTCCTGTTGCAGCCGTGGCAGCAGCAGACGCT
GCGTACTGGCTAGCAGACATCGCCCACCAAGGAGTCGCAGCCTTCAACTCGAACCCTTCTGGCTACCAAGTCTTC
CGAAACGTGAAAGACTACGGAGCTATAGGTGATGGTGTGACCGACGATACGGCCGCGATCAATGCGGCCATAAGC
GCCGGTGGCCGGTTTGGCCCGGCAAGCAGACAATCCTCGACCACGACTCCTGCGATAGTCTACTTCCCATCGGGA
ACGTACCTGATCTCATCGTCGATTATTGATTACTATTTCACCCAGCTGATTGGCAACCCGAATGCAATGCCTGTT
ATAAAAGCAACCGCAGGTTTTGTCGGACTGGGGCTGATTGACGGTGATCAATACCAGAGCGATGGAAACCAGGGC
TGGACGTCGACGAATGTGTTCTTCAGACAGGTTCGCAATTTGAAATTGGACTTGACCTCAATCCCTGCCGGTACT
GCTGCGACTGGTATTCATTGGCCGACTGGCCAAGCTTCCAGCATCGAGAACGTTGTCATTGCTATGAGTTCTGCT
TCTGGAACACAGCACCAGGGTATTTTCATTGAGAATGGCTCTGGTGGCTGGTTGACCGATGTGGTAATTAATGGT
GGCCTCTATGGTGCCAATATTGGCAACCAGCAATTCACAATGCGGAACCTGGCCATTTCAAATTCAGTGACCGCA
ATTTCTCAGATCTGGAACTGGGGGTGGACTTATCAAGGTCTGTCTTTGACTAACTGCACAACTGCTATTTCGATC
AGCAATGGTGGTGCTGGGGCCCAACTCGTTGGCTCGGTCAATATCCTTGACAGCACCATCCAAAACTGCCCTACC
TTTGTCGATACCGCTTGGCAGACTTCCACACTATCAACTGGAAGTCTCATTCTGGAGAACATAATTCTGAACAAC
GTCCCCGTTGCAGTCAAAGGCGTCAGTGGTACTGTTCTTGCTGGCTCGGGGGCCTCTACGACCATTGCTGCTTGG
GGACAAGGCCACAAATATACTCCAAACGGACCGACCAACTTCCAGGGCTCTTTCACTGCACCGACACGTCCTAGC
GCTTTGCTTGCTGGTGGATCGAACAGATATTTTACCAAGTCAAAGCCTCAGTATGAGCAATCACCAGTTGCTTCG
TTTGTCAGCATTAGAAGTGCAGGCGCCAGGGGAGATGGTTCAACCGATGACACGACAGCCATTCAGTCTGCGCTG
ACATCTGCCGCATCTGCAGGTAAGATTGTGTTCTTTGATCAAGGAACGTACAAAGTCACCGGCACTATTTACGTC
CCACCGGGCTCTCGGATTGTCGGAGAGGCATATCCTGTCATCATGGCAACCGGCAGTGTATGGTCGAGCATTACC
AATCCCGTTCCGGTGGTTCAAATTGGCAAATCTGGAGAATCTGGGTTCGTTGAATGGTCTGATATGATAGTGAGC
ACCGCGGGCTCCACGCCGGGCGCTGTACTCATTGAGTGGAACTTGGCAGCGACATCAGGCGCTGGGATGTGGGAT
GTTCACACTCGAATCGGGGGCTTCCAAGGATCTCAGCAGCAGGTTGCTCAGTGCCCGACGACTGCAGCTGTCTCG
GCAGGCTGTGAGGTTGGTTACATGTCCATGCACATTACCAAAGTCGCCAGTGGTGTTTACTTGGAGAATGTCTGG
CTATGGACCGCCGACCATGACCTTGAGAGCGCTACTAATACTCAAATCTCGGTCTATACCGGTCGCGGTCTCTTG
GTAGAAGGAAATAATGTCTGGTTATACGGAACGGCGTCCGAGCATCACTCGCTGTATCAGTATCAGTTCTCAGGC
GCGAGTTCGATTGTGGCAGGGTTCATACAAACAGAAACTCCATACTATCAACCAAATCCCAATGCAGCCAACGGC
CCGTACCCTACCAACTCGGCTCTCAATGACCCTGACTATAGCAGCTGTCTCGGCGGAAACTGCGACTCTCTTGGT
CTTCGGATTCTCAATACCAAGGATGTGATTATCTACGGGGCTGGGCTATACAGCTTTTTCAACAACTACAGCACC
ACTTGCTCCACCTTCCCCCTTCCAGAGGATTGCCAAAGTATGATCTTCAGCGTTGAGGGCAGTACAAGTGGACTG
GTGGTATATGGGTTGAACACTGTTGGGACAAGCTATATGATTGTGAAGGATGGTACTGCGTTGGCGACGGTTGGC
GACAATCTGGCTACGTTCGCTGCTACTATTGCGTACTTCACCTTCTAG
Transcript >Pro_DTO377G3_2|g5270.t1
ATGTATTATTCTTTTGTGATCAAGTATTTCTCTTTGGTGGCTTGTGCCAATGCACAGCTACTAGAGATCCCCGCT
GTGGATGCTATAGTCAGCTCTGCCATGCTCCCTTTTGAGCAGTATACTTCCTTCGGTGCTTCAACAAAGACTGCC
TCGGCTGCTGTAAGCTTCGAGACCAAGGTCGCCGTGGTCAACTCTCCTGTTGCAGCCGTGGCAGCAGCAGACGCT
GCGTACTGGCTAGCAGACATCGCCCACCAAGGAGTCGCAGCCTTCAACTCGAACCCTTCTGGCTACCAAGTCTTC
CGAAACGTGAAAGACTACGGAGCTATAGGTGATGGTGTGACCGACGATACGGCCGCGATCAATGCGGCCATAAGC
GCCGGTGGCCGGTTTGGCCCGGCAAGCAGACAATCCTCGACCACGACTCCTGCGATAGTCTACTTCCCATCGGGA
ACGTACCTGATCTCATCGTCGATTATTGATTACTATTTCACCCAGCTGATTGGCAACCCGAATGCAATGCCTGTT
ATAAAAGCAACCGCAGGTTTTGTCGGACTGGGGCTGATTGACGGTGATCAATACCAGAGCGATGGAAACCAGGGC
TGGACGTCGACGAATGTGTTCTTCAGACAGGTTCGCAATTTGAAATTGGACTTGACCTCAATCCCTGCCGGTACT
GCTGCGACTGGTATTCATTGGCCGACTGGCCAAGCTTCCAGCATCGAGAACGTTGTCATTGCTATGAGTTCTGCT
TCTGGAACACAGCACCAGGGTATTTTCATTGAGAATGGCTCTGGTGGCTGGTTGACCGATGTGGTAATTAATGGT
GGCCTCTATGGTGCCAATATTGGCAACCAGCAATTCACAATGCGGAACCTGGCCATTTCAAATTCAGTGACCGCA
ATTTCTCAGATCTGGAACTGGGGGTGGACTTATCAAGGTCTGTCTTTGACTAACTGCACAACTGCTATTTCGATC
AGCAATGGTGGTGCTGGGGCCCAACTCGTTGGCTCGGTCAATATCCTTGACAGCACCATCCAAAACTGCCCTACC
TTTGTCGATACCGCTTGGCAGACTTCCACACTATCAACTGGAAGTCTCATTCTGGAGAACATAATTCTGAACAAC
GTCCCCGTTGCAGTCAAAGGCGTCAGTGGTACTGTTCTTGCTGGCTCGGGGGCCTCTACGACCATTGCTGCTTGG
GGACAAGGCCACAAATATACTCCAAACGGACCGACCAACTTCCAGGGCTCTTTCACTGCACCGACACGTCCTAGC
GCTTTGCTTGCTGGTGGATCGAACAGATATTTTACCAAGTCAAAGCCTCAGTATGAGCAATCACCAGTTGCTTCG
TTTGTCAGCATTAGAAGTGCAGGCGCCAGGGGAGATGGTTCAACCGATGACACGACAGCCATTCAGTCTGCGCTG
ACATCTGCCGCATCTGCAGGTAAGATTGTGTTCTTTGATCAAGGAACGTACAAAGTCACCGGCACTATTTACGTC
CCACCGGGCTCTCGGATTGTCGGAGAGGCATATCCTGTCATCATGGCAACCGGCAGTGTATGGTCGAGCATTACC
AATCCCGTTCCGGTGGTTCAAATTGGCAAATCTGGAGAATCTGGGTTCGTTGAATGGTCTGATATGATAGTGAGC
ACCGCGGGCTCCACGCCGGGCGCTGTACTCATTGAGTGGAACTTGGCAGCGACATCAGGCGCTGGGATGTGGGAT
GTTCACACTCGAATCGGGGGCTTCCAAGGATCTCAGCAGCAGGTTGCTCAGTGCCCGACGACTGCAGCTGTCTCG
GCAGGCTGTGAGGTTGGTTACATGTCCATGCACATTACCAAAGTCGCCAGTGGTGTTTACTTGGAGAATGTCTGG
CTATGGACCGCCGACCATGACCTTGAGAGCGCTACTAATACTCAAATCTCGGTCTATACCGGTCGCGGTCTCTTG
GTAGAAGGAAATAATGTCTGGTTATACGGAACGGCGTCCGAGCATCACTCGCTGTATCAGTATCAGTTCTCAGGC
GCGAGTTCGATTGTGGCAGGGTTCATACAAACAGAAACTCCATACTATCAACCAAATCCCAATGCAGCCAACGGC
CCGTACCCTACCAACTCGGCTCTCAATGACCCTGACTATAGCAGCTGTCTCGGCGGAAACTGCGACTCTCTTGGT
CTTCGGATTCTCAATACCAAGGATGTGATTATCTACGGGGCTGGGCTATACAGCTTTTTCAACAACTACAGCACC
ACTTGCTCCACCTTCCCCCTTCCAGAGGATTGCCAAAGTATGATCTTCAGCGTTGAGGGCAGTACAAGTGGACTG
GTGGTATATGGGTTGAACACTGTTGGGACAAGCTATATGATTGTGAAGGATGGTACTGCGTTGGCGACGGTTGGC
GACAATCTGGCTACGTTCGCTGCTACTATTGCGTACTTCACCTTCTAG
Gene >Pro_DTO377G3_2|g5270.t1
ATGTATTATTCTTTTGTGATCAAGTATTTCTCTTTGGTGGCTTGTGCCAATGCACAGCTACTAGAGATCCCCGCT
GTGGATGCTATAGTCAGCTCTGCCATGCTCCCTTTTGAGCAGTATACTTCCTTCGGTGCTTCAACAAAGACTGCC
TCGGCTGCTGTAAGCTTCGAGACCAAGGTCGCCGTGGTCAACTCTCCTGTTGCAGCCGTGGCAGCAGCAGACGCT
GCGTACTGGCTAGCAGACATCGCCCACCAAGGAGTCGCAGCCTTCAACTCGAACCCTTCTGGCTACCAAGTCTTC
CGAAACGTGAAAGACTACGGAGCTATAGGTGTGCATTGAAGGATCGCTACTACCTGAGACGTACTAAAGTGAGCA
TAGGTGATGGTGTGACCGACGATACGGCCGCGATCAATGCGGCCATAAGCGCCGGTGGCCGGTTTGGCCCGGCAA
GCAGACAATCCTCGACCACGACTCCTGCGATAGTCTACTTCCCATCGGGAACGTACCTGATCTCATCGTCGATTA
TTGATTACTATTTCACCCAGCTGATTGGCAACCCGAATGCAATGCCTGTTATAAAAGCAACCGCAGGTTTTGTCG
GACTGGGGCTGATTGACGGTGATCAATACCAGAGCGATGGAAACCAGGGCTGGACGTCGACGAATGTGTTCTTCA
GACAGGTTCGCAATTTGAAATTGGACTTGACCTCAATCCCTGCCGGTACTGCTGCGACTGGTATTCATTGGCCGA
CTGGCCAAGCTTCCAGCATCGAGAACGTTGTCATTGCTATGAGTTCTGCTTCTGGAACACAGCACCAGGGTATTT
TCATTGAGAATGGTATGTTGCTACTTTATTTTTTTTAGGTCTATACTAATCCAATACCAGGCTCTGGTGGCTGGT
TGACCGATGTGGTAATTAATGGTGGCCTCTATGGTGCCAATATTGGCAACCAGCAATTCACAATGCGGAACCTGG
CCATTTCAAATTCAGTGACCGCAATTTCTCAGATCTGGAACTGGGGGTGGACTTATCAAGGTCTGTCTTTGACTA
ACTGCACAACTGCTATTTCGATCAGCAATGGTGGTGCTGGGGCCCAACTCGTTGGCTCGGTCAATATCCTTGACA
GCACCATCCAAAACTGCCCTACCTTTGTCGATACCGCTTGGCAGACTTCCACACTATCAACTGGAAGTCTCATTC
TGGAGAACATAATTCTGAACAACGTCCCCGTTGCAGTCAAAGGCGTCAGTGGTACTGTTCTTGCTGGCTCGGGGG
CCTCTACGACCATTGCTGCTTGGGGACAAGGCCACAAATATACTCCAAACGGACCGACCAACTTCCAGGGCTCTT
TCACTGCACCGACACGTCCTAGCGCTTTGCTTGCTGGTGGATCGAACAGATATTTTACCAAGTCAAAGCCTCAGT
ATGAGCAATCACCAGTTGCTTCGTTTGTCAGCATTAGAAGTGCAGGCGCCAGGGGAGATGGTTCAACCGATGACA
CGACAGCCATTCAGTCTGCGCTGACATCTGCCGCATCTGCAGGTAAGATTGTGTTCTTTGATCAAGGAACGTACA
AAGTCACCGGCACTATTTACGTCCCACCGGGCTCTCGGATTGTCGGAGAGGCATATCCTGTCATCATGGCAACCG
GCAGTGTATGGTCGAGCATTACCAATCCCGTTCCGGTGGTTCAAATTGGCAAATCTGGAGAATCTGGGTTCGTTG
AATGGTCTGATATGATAGTGAGCACCGCGGGCTCCACGCCGGGCGCTGTACTCATTGAGTGGAACTTGGCAGCGA
CATCAGGCGCTGGGATGTGGGATGTTCACACTCGAATCGGGGGCTTCCAAGGATCTCAGCAGCAGGTTGCTCAGT
GCCCGACGACTGCAGCTGTCTCGGCAGGCTGTGAGGTTGGTTACATGTCCATGCACATTACCAAAGTCGCCAGTG
GTGTTTACTTGGAGAATGTCTGGCTATGGACCGCCGACCATGACCTTGAGAGCGCTACTAATACTCAAATCTCGG
TCTATACCGGTCGCGGTCTCTTGGTAGAAGGAAATAATGTCTGGTTGTAAGTGACAGATAATCCTCACAATGCTT
TCTCATAACTAACATCGGCGCAAGATACGGAACGGCGTCCGAGCATCACTCGCTGTATCAGTATCAGTTCTCAGG
CGCGAGTTCGATTGTGGCAGGGTTCATACAAACAGAAACTCCGTAAGTGATCCAACACGTGCTGCTGCCCTTGCA
TCTCCTGTCCTAACCAATTGCATGCAGATACTATCAACCAAATCCCAATGCAGCCAACGGCCCGTACCCTACCAA
CTCGGCTCTCAATGACCCTGACTATAGCAGCTGTCTCGGCGGAAACTGCGACTCTCTTGGTCTTCGGATTCTCAA
TACCAAGGATGTGATTATCTACGGGGCTGGGCTATACAGCTTTTTCAACAACTACAGCACCACTTGCTCCACCTT
CCCCCTTCCAGAGGATTGCCAAAGTATGATCTTCAGCGTTGAGGGCAGTACAAGTGGACTGGTGGTATATGGGTT
GAACACTGTTGGGACAAGCTATATGATTGTGAAGGATGGTACTGCGTTGGCGACGGTTGGCGACAATCTGGCTAC
GTTCGCTGCTACTATTGCGTACTTCACCTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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