© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g527.t1 |
| Gene name | |
| Location | scaffold_01:1351416..1353333 |
| Strand | - |
| Gene length (bp) | 1917 |
| Transcript length (bp) | 1659 |
| Coding sequence length (bp) | 1659 |
| Protein length (aa) | 553 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 5.0E-09 | 115 | 154 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 4.1E-14 | 157 | 195 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 1.5E-09 | 198 | 239 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 1.3E-04 | 251 | 281 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 3.5E-07 | 284 | 322 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 1.3E-11 | 325 | 364 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 1.7E-12 | 367 | 406 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 7.8E-08 | 413 | 450 |
| PF01749 | IBB | Importin beta binding domain | 1.3E-26 | 10 | 104 |
| PF16186 | Arm_3 | Atypical Arm repeat | 1.9E-23 | 469 | 523 |
| PF13513 | HEAT_EZ | HEAT-like repeat | 1.3E-08 | 141 | 194 |
| PF13646 | HEAT_2 | HEAT repeats | 6.8E-08 | 129 | 229 |
| PF02985 | HEAT | HEAT repeat | 3.5E-06 | 169 | 195 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0061608 | nuclear import signal receptor activity | Yes |
| GO:0006606 | protein import into nucleus | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0051641 | cellular localization | No |
| GO:0046907 | intracellular transport | No |
| GO:0008104 | protein localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0071702 | organic substance transport | No |
| GO:0042886 | amide transport | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0006913 | nucleocytoplasmic transport | No |
| GO:0034504 | protein localization to nucleus | No |
| GO:0051170 | import into nucleus | No |
| GO:0017038 | protein import | No |
| GO:0051179 | localization | No |
| GO:0140104 | molecular carrier activity | No |
| GO:0033365 | protein localization to organelle | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0051169 | nuclear transport | No |
| GO:0140142 | nucleocytoplasmic carrier activity | No |
| GO:0072594 | establishment of protein localization to organelle | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0015833 | peptide transport | No |
| GO:0033036 | macromolecule localization | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0015031 | protein transport | No |
| GO:0006886 | intracellular protein transport | No |
| GO:0005488 | binding | No |
| GO:0034613 | cellular protein localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g527.t1 MAERYIPEHRRTQFKAKNQFKPDELRRRREEQQVEIRKAKRDENLAKRRGIQTQDGRIGVGGMAAATESDDEASA IESELNVELPQMVKGVFSDQVEEQIQATTKFRKLLSKERNPPIERVIETGVVARFVEFLRSPHTLVQFESAWALT NIASGSAQQTQVVIEAGAVPIFVELLSSPEPDVREQAVWALGNIAGDSPHCRDFVLGAGALRPLLNLINDGRKLS MLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLIYMLDDEVLIDACWAISYLSDGANDKIQAVIEAGIPRRLV ELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGSLPALLSLLSSTKDGIRKEACWTISNVTAGNSSQIQAVI DAGIIAPLINLLANGDFKTRKEACWAISNATSGGLQKPDQIRYLVSQGCIKPLCDLLACPDNKIIQVALDGLENI LKVGDMDKEAGQPGEARVNRYALFIEEAGGMEKIHDCQNNANEEIYMKAYNIIEKYFSDEDEAGGDIEELAPQQT QTGFALGTGQQQPGGFNFGNGGDTMDM* |
| Coding | >Pro_DTO377G3_2|g527.t1 ATGGCGGAACGCTATATTCCCGAGCATCGCCGCACACAGTTCAAGGCCAAGAACCAGTTCAAGCCCGATGAGCTC CGCCGCCGCCGTGAAGAACAGCAGGTCGAGATTCGCAAGGCTAAGCGTGATGAGAACTTAGCCAAGAGACGTGGT ATCCAAACTCAGGACGGTAGAATCGGTGTTGGTGGCATGGCTGCCGCCACTGAGAGTGATGATGAGGCCAGTGCT ATTGAGAGTGAGCTCAACGTCGAGCTTCCCCAGATGGTGAAGGGAGTTTTCTCAGATCAGGTTGAGGAACAGATC CAGGCCACCACCAAGTTCCGCAAATTGCTTTCCAAGGAGCGCAACCCCCCTATCGAGCGTGTTATTGAGACCGGT GTCGTAGCCCGTTTCGTCGAGTTCCTTCGCTCACCCCACACCCTGGTTCAGTTTGAGTCTGCCTGGGCTTTGACC AACATTGCTTCCGGTTCCGCCCAGCAGACCCAGGTCGTCATTGAAGCTGGTGCCGTCCCCATCTTCGTCGAGTTG CTTAGCAGCCCTGAGCCCGATGTTCGTGAACAGGCCGTTTGGGCCCTCGGAAACATTGCTGGTGACAGCCCTCAC TGCCGTGACTTTGTCCTCGGTGCCGGTGCCCTGCGCCCGCTTCTTAACCTCATCAACGATGGCCGCAAGCTGAGC ATGCTCCGCAACGCTACTTGGACTCTTAGCAACTTCTGCCGTGGCAAGACTCCCCAGCCTGACTGGAACACTATT GCCCCCGCCCTTCCAGTCCTTGCCAAGCTCATCTACATGCTGGATGACGAGGTCCTGATTGACGCTTGCTGGGCT ATCTCTTACTTGTCCGATGGTGCCAACGACAAGATTCAGGCCGTTATCGAGGCCGGTATCCCCCGTCGCCTGGTG GAGCTCCTTATGCACGCCTCTACCTCTGTCCAGACTCCCGCTCTCCGTTCCGTGGGTAACATTGTCACTGGTGAT GACGTCCAGACCCAGGTGATCATTAACTGTGGCTCTCTTCCTGCTCTGCTCTCCCTCCTGAGCTCCACCAAGGAT GGTATCCGCAAGGAAGCTTGCTGGACCATCTCCAACGTCACTGCCGGTAACTCCAGCCAGATTCAGGCGGTCATC GACGCTGGCATCATTGCTCCCCTTATCAACCTTCTTGCCAATGGTGACTTCAAGACCCGCAAGGAGGCTTGCTGG GCTATCTCTAACGCTACTTCCGGTGGTCTCCAGAAGCCCGATCAGATCCGCTACCTTGTTTCTCAAGGCTGCATC AAACCCCTGTGCGATCTCCTGGCCTGCCCTGACAATAAGATCATCCAGGTCGCTCTCGACGGTCTCGAGAACATC CTCAAGGTCGGAGATATGGACAAGGAGGCTGGCCAGCCCGGTGAGGCTCGTGTCAACCGCTACGCTCTCTTCATC GAAGAGGCCGGTGGCATGGAGAAGATTCACGATTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCCTAC AACATTATCGAGAAGTACTTCTCTGACGAGGATGAGGCCGGTGGCGATATCGAGGAACTTGCTCCCCAACAGACC CAGACTGGATTTGCTCTCGGCACTGGCCAGCAGCAACCTGGTGGCTTCAACTTCGGCAACGGCGGTGATACCATG GATATGTAA |
| Transcript | >Pro_DTO377G3_2|g527.t1 ATGGCGGAACGCTATATTCCCGAGCATCGCCGCACACAGTTCAAGGCCAAGAACCAGTTCAAGCCCGATGAGCTC CGCCGCCGCCGTGAAGAACAGCAGGTCGAGATTCGCAAGGCTAAGCGTGATGAGAACTTAGCCAAGAGACGTGGT ATCCAAACTCAGGACGGTAGAATCGGTGTTGGTGGCATGGCTGCCGCCACTGAGAGTGATGATGAGGCCAGTGCT ATTGAGAGTGAGCTCAACGTCGAGCTTCCCCAGATGGTGAAGGGAGTTTTCTCAGATCAGGTTGAGGAACAGATC CAGGCCACCACCAAGTTCCGCAAATTGCTTTCCAAGGAGCGCAACCCCCCTATCGAGCGTGTTATTGAGACCGGT GTCGTAGCCCGTTTCGTCGAGTTCCTTCGCTCACCCCACACCCTGGTTCAGTTTGAGTCTGCCTGGGCTTTGACC AACATTGCTTCCGGTTCCGCCCAGCAGACCCAGGTCGTCATTGAAGCTGGTGCCGTCCCCATCTTCGTCGAGTTG CTTAGCAGCCCTGAGCCCGATGTTCGTGAACAGGCCGTTTGGGCCCTCGGAAACATTGCTGGTGACAGCCCTCAC TGCCGTGACTTTGTCCTCGGTGCCGGTGCCCTGCGCCCGCTTCTTAACCTCATCAACGATGGCCGCAAGCTGAGC ATGCTCCGCAACGCTACTTGGACTCTTAGCAACTTCTGCCGTGGCAAGACTCCCCAGCCTGACTGGAACACTATT GCCCCCGCCCTTCCAGTCCTTGCCAAGCTCATCTACATGCTGGATGACGAGGTCCTGATTGACGCTTGCTGGGCT ATCTCTTACTTGTCCGATGGTGCCAACGACAAGATTCAGGCCGTTATCGAGGCCGGTATCCCCCGTCGCCTGGTG GAGCTCCTTATGCACGCCTCTACCTCTGTCCAGACTCCCGCTCTCCGTTCCGTGGGTAACATTGTCACTGGTGAT GACGTCCAGACCCAGGTGATCATTAACTGTGGCTCTCTTCCTGCTCTGCTCTCCCTCCTGAGCTCCACCAAGGAT GGTATCCGCAAGGAAGCTTGCTGGACCATCTCCAACGTCACTGCCGGTAACTCCAGCCAGATTCAGGCGGTCATC GACGCTGGCATCATTGCTCCCCTTATCAACCTTCTTGCCAATGGTGACTTCAAGACCCGCAAGGAGGCTTGCTGG GCTATCTCTAACGCTACTTCCGGTGGTCTCCAGAAGCCCGATCAGATCCGCTACCTTGTTTCTCAAGGCTGCATC AAACCCCTGTGCGATCTCCTGGCCTGCCCTGACAATAAGATCATCCAGGTCGCTCTCGACGGTCTCGAGAACATC CTCAAGGTCGGAGATATGGACAAGGAGGCTGGCCAGCCCGGTGAGGCTCGTGTCAACCGCTACGCTCTCTTCATC GAAGAGGCCGGTGGCATGGAGAAGATTCACGATTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCCTAC AACATTATCGAGAAGTACTTCTCTGACGAGGATGAGGCCGGTGGCGATATCGAGGAACTTGCTCCCCAACAGACC CAGACTGGATTTGCTCTCGGCACTGGCCAGCAGCAACCTGGTGGCTTCAACTTCGGCAACGGCGGTGATACCATG GATATGTAA |
| Gene | >Pro_DTO377G3_2|g527.t1 ATGGCGGAACGCTATATTCCCGAGCATCGCCGCACACAGTTCAAGGCCAAGAACCAGTTCAAGCCCGATGAGCTC CGCCGCCGCCGTGAAGAACAGCAGGTCGAGATTCGCAAGGCTAAGCGTGATGAGAACTTAGCCAAGAGACGTGGT ATCCAAACTCAGGACGGTAGAATCGGTGTTGGTGGCATGGCTGCCGCCACTGAGAGTGATGATGAGGCCAGTGCT ATTGAGAGTGAGGTAGGTCTTTCAATTTTTCTTTGATCCTTTGAAATCTGTTCTATTCTATATCCTCCTTTGGAT TTCTACGGGCTCATGGTGTGGTCACCACCTTTATGGGCCCTGAGTGAATTCTTTGTTTTCATGATGCGATCATCA ACAAGGATTTTTTTTCACCGCCCTGTTGCCATGGCCCACGAAGACCCCTCTGACTTGACCCCACTGCAATAAAAA AAAAACATCGTGAAAATTACCAAGCTAACATAATGATTTATTCAGCTCAACGTCGAGCTTCCCCAGATGGTGAAG GGAGTTTTCTCAGATCAGGTTGAGGAACAGATCCAGGCCACCACCAAGTTCCGCAAATTGCTTTCCAAGGAGCGC AACCCCCCTATCGAGCGTGTTATTGAGACCGGTGTCGTAGCCCGTTTCGTCGAGTTCCTTCGCTCACCCCACACC CTGGTTCAGTTTGAGTCTGCCTGGGCTTTGACCAACATTGCTTCCGGTTCCGCCCAGCAGACCCAGGTCGTCATT GAAGCTGGTGCCGTCCCCATCTTCGTCGAGTTGCTTAGCAGCCCTGAGCCCGATGTTCGTGAACAGGCCGTTTGG GCCCTCGGAAACATTGCTGGTGACAGCCCTCACTGCCGTGACTTTGTCCTCGGTGCCGGTGCCCTGCGCCCGCTT CTTAACCTCATCAACGATGGCCGCAAGCTGAGCATGCTCCGCAACGCTACTTGGACTCTTAGCAACTTCTGCCGT GGCAAGACTCCCCAGCCTGACTGGAACACTATTGCCCCCGCCCTTCCAGTCCTTGCCAAGCTCATCTACATGCTG GATGACGAGGTCCTGATTGACGCTTGCTGGGCTATCTCTTACTTGTCCGATGGTGCCAACGACAAGATTCAGGCC GTTATCGAGGCCGGTATCCCCCGTCGCCTGGTGGAGCTCCTTATGCACGCCTCTACCTCTGTCCAGACTCCCGCT CTCCGTTCCGTGGGTAACATTGTCACTGGTGATGACGTCCAGACCCAGGTGATCATTAACTGTGGCTCTCTTCCT GCTCTGCTCTCCCTCCTGAGCTCCACCAAGGATGGTATCCGCAAGGAAGCTTGCTGGACCATCTCCAACGTCACT GCCGGTAACTCCAGCCAGATTCAGGCGGTCATCGACGCTGGCATCATTGCTCCCCTTATCAACCTTCTTGCCAAT GGTGACTTCAAGACCCGCAAGGAGGCTTGCTGGGCTATCTCTAACGCTACTTCCGGTGGTCTCCAGAAGCCCGAT CAGATCCGCTACCTTGTTTCTCAAGGCTGCATCAAACCCCTGTGCGATCTCCTGGCCTGCCCTGACAATAAGATC ATCCAGGTCGCTCTCGACGGTCTCGAGAACATCCTCAAGGTCGGAGATATGGACAAGGAGGCTGGCCAGCCCGGT GAGGCTCGTGTCAACCGCTACGCTCTCTTCATCGAAGAGGCCGGTGGCATGGAGAAGATTCACGATTGCCAGAAC AACGCCAACGAGGAGATCTACATGAAGGCCTACAACATTATCGAGAAGTACTTCTCTGACGAGGATGAGGCCGGT GGCGATATCGAGGAACTTGCTCCCCAACAGACCCAGACTGGATTTGCTCTCGGCACTGGCCAGCAGCAACCTGGT GGCTTCAACTTCGGCAACGGCGGTGATACCATGGATATGTAA |