Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5266.t1
Gene name
Locationscaffold_12:342372..343302
Strand+
Gene length (bp)930
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.8E-55 65 305
PF00106 adh_short short chain dehydrogenase 4.3E-43 60 253
PF08659 KR KR domain 1.5E-15 59 243

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5266.t1
MPTNTSAGASEDQRASLISRVLPRMTMSEGSSPLTRPLAPVPFTDGRSRAEARFQVQGKAIVTGGAGGLGLVSAQ
ALLEHGLSSLCIMDLPSTLETSSEQIQSLASKFPSANITKIPLDVTSMESIEAAFEQANKTMEGIDILCCFAGIP
GCQPSLSVTPDQFNRVIDVNLTGSFFCAQAAAKRMESSGKGGCVLFTASISAHLTNFPQPQAAYNASKAGVAHMT
RSLAAEWAVHGIRVNSISPGYMDTILNAGDSLADVRKIWDSRCPMGRMGDPEEITGAVVLLCSYRAGRYITGADI
AVDGGTLAL*
Coding >Pro_DTO377G3_2|g5266.t1
ATGCCTACCAACACCTCAGCAGGAGCGAGTGAGGACCAGCGTGCCTCTCTGATTTCCCGAGTCCTTCCTAGAATG
ACTATGTCGGAGGGATCAAGTCCGCTCACTCGCCCCCTCGCTCCAGTGCCCTTTACAGATGGTCGCTCACGAGCA
GAAGCACGATTTCAAGTTCAGGGCAAAGCCATAGTCACCGGCGGAGCAGGAGGACTAGGCTTAGTCTCTGCACAG
GCTCTCCTGGAACATGGACTCTCCTCACTATGTATCATGGACCTCCCCAGTACGTTGGAGACGTCATCAGAACAA
ATTCAATCACTAGCATCAAAGTTCCCCTCTGCCAATATAACCAAAATTCCCCTGGACGTGACATCAATGGAGTCA
ATCGAAGCCGCATTTGAACAAGCAAACAAGACAATGGAAGGTATCGACATCCTCTGCTGCTTCGCTGGGATCCCC
GGCTGCCAACCATCCCTCTCAGTAACACCCGACCAATTCAACAGAGTTATAGACGTCAACCTAACTGGATCCTTT
TTCTGCGCCCAGGCAGCAGCAAAGCGCATGGAATCCTCAGGCAAAGGCGGGTGTGTTTTATTCACTGCGTCGATA
TCTGCCCATCTTACCAATTTCCCGCAGCCGCAGGCGGCTTACAATGCGAGCAAGGCTGGGGTCGCGCATATGACT
CGCAGTCTGGCTGCTGAGTGGGCTGTTCATGGGATCAGAGTAAATAGTATTAGTCCCGGGTATATGGATACTATT
CTTAATGCTGGGGACAGTTTGGCGGATGTTAGGAAGATTTGGGATTCTCGTTGTCCGATGGGCCGGATGGGAGAT
CCTGAAGAGATTACTGGGGCTGTAGTTCTTCTGTGTAGTTATCGTGCAGGACGGTACATCACTGGTGCTGATATT
GCTGTTGATGGGGGGACTTTGGCTCTGTGA
Transcript >Pro_DTO377G3_2|g5266.t1
ATGCCTACCAACACCTCAGCAGGAGCGAGTGAGGACCAGCGTGCCTCTCTGATTTCCCGAGTCCTTCCTAGAATG
ACTATGTCGGAGGGATCAAGTCCGCTCACTCGCCCCCTCGCTCCAGTGCCCTTTACAGATGGTCGCTCACGAGCA
GAAGCACGATTTCAAGTTCAGGGCAAAGCCATAGTCACCGGCGGAGCAGGAGGACTAGGCTTAGTCTCTGCACAG
GCTCTCCTGGAACATGGACTCTCCTCACTATGTATCATGGACCTCCCCAGTACGTTGGAGACGTCATCAGAACAA
ATTCAATCACTAGCATCAAAGTTCCCCTCTGCCAATATAACCAAAATTCCCCTGGACGTGACATCAATGGAGTCA
ATCGAAGCCGCATTTGAACAAGCAAACAAGACAATGGAAGGTATCGACATCCTCTGCTGCTTCGCTGGGATCCCC
GGCTGCCAACCATCCCTCTCAGTAACACCCGACCAATTCAACAGAGTTATAGACGTCAACCTAACTGGATCCTTT
TTCTGCGCCCAGGCAGCAGCAAAGCGCATGGAATCCTCAGGCAAAGGCGGGTGTGTTTTATTCACTGCGTCGATA
TCTGCCCATCTTACCAATTTCCCGCAGCCGCAGGCGGCTTACAATGCGAGCAAGGCTGGGGTCGCGCATATGACT
CGCAGTCTGGCTGCTGAGTGGGCTGTTCATGGGATCAGAGTAAATAGTATTAGTCCCGGGTATATGGATACTATT
CTTAATGCTGGGGACAGTTTGGCGGATGTTAGGAAGATTTGGGATTCTCGTTGTCCGATGGGCCGGATGGGAGAT
CCTGAAGAGATTACTGGGGCTGTAGTTCTTCTGTGTAGTTATCGTGCAGGACGGTACATCACTGGTGCTGATATT
GCTGTTGATGGGGGGACTTTGGCTCTGTGA
Gene >Pro_DTO377G3_2|g5266.t1
ATGCCTACCAACACCTCAGCAGGAGCGAGTGAGGACCAGCGTGCCTCTCTGATTTCCCGAGTCCTTCCTAGAATG
ACTATGTCGGAGGGATCAAGTCCGCTCACTCGCCCCCTCGCTCCAGTGCCCTTTACAGATGGTCGCTCACGAGCA
GAAGCACGATTTCAAGTTCAGGGCAAAGCCATAGTCACCGGCGGAGCAGGAGGACTAGGCTTAGTCTCTGCACAG
GCTCTCCTGGAACATGGACTCTCCTCACTATGTATCATGGACCTCCCCAGTACGTTGGAGACGTCATCAGAACAA
ATTCAATCACTAGCATCAAAGTTCCCCTCTGCCAATATAACCAAAATTCCCCTGGACGTGACATCAATGGAGTCA
ATCGAAGCCGCATTTGAACAAGCAAACAAGACAATGGAAGGTATCGACATCCTCTGCTGCTTCGCTGGGATCCCC
GGCTGCCAACCATCCCTCTCAGTAACACCCGACCAATTCAACAGAGTTATAGACGTCAACCTAACTGGATCCTTT
TTCTGCGCCCAGGCAGCAGCAAAGCGCATGGAATCCTCAGGCAAAGGCGGGTGTGTTTTATTCACTGCGTCGATA
TCTGCCCATCTTACCAATTTCCCGCAGCCGCAGGCGGCTTACAATGCGAGCAAGGCTGGGGTCGCGCATATGACT
CGCAGTCTGGCTGCTGAGTGGGCTGTTCATGGGATCAGAGTAAATAGTATTAGTCCCGGGTATATGGATACTATT
CTTAATGCTGGGGACAGTTTGGCGGATGTTAGGAAGATTTGGGATTCTCGTTGTCCGATGGGCCGGATGGGAGAT
CCTGAAGAGATTACTGGGGCTGTAGTTCTTCTGTGTAGTTATCGTGCAGGACGGTACATCACTGGTGCTGATATT
GCTGTTGATGGGGGGACTTTGGCTCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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