Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5265.t1
Gene name
Locationscaffold_12:339651..341545
Strand+
Gene length (bp)1894
Transcript length (bp)1362
Coding sequence length (bp)1362
Protein length (aa) 454

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01490 Aa_trans Transmembrane amino acid transporter protein 3.6E-38 44 429

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 73 95 22
3 125 147 22
4 157 174 17
5 181 203 22
6 223 245 22
7 258 280 22
8 309 331 22
9 344 366 22
10 376 398 22
11 411 433 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5265.t1
MSDEKYVADSKIERPLEKDVEKKLDATQLEPFGNEDTAEVKYRTMKWWHCGMLMIAENVSVGILSLPSAVATLGM
VPAAIMILFVSALSWYTGYVIGQFKLRHPAVHSMGDAGEILMGPFGRELLGLGQLLLLIFLMASNILMFNILMNV
LTDHGTCTLVFGVVGLVICFLGALPRTMDKVYWMSVISFLSVFVATVLTMITVGVESKGHVKNEATTDVSFREGF
LAVTNIIFAYLAHVAYFGFMSETEDPRTFNKSLAMLQIIDTTLYLVSALLIYHYVGPETATSVGVQSPAILSLSP
LMGKIAWGLSIPTTILSGVVLGHVACKYIYVRMFRGSDKMHGRTLLSIGSWVGICLAVWVVAWVVAESIPVFNDL
LSLISAVFGSWFSFGLPAIFWFYMNKGRYFQNWKKIVLTITNILVLAIAFAIVVRVGTMGVRSRHSRRLQFQKLV
LCQ*
Coding >Pro_DTO377G3_2|g5265.t1
ATGTCGGACGAAAAGTATGTTGCGGACAGCAAGATCGAGAGACCACTCGAAAAAGACGTGGAGAAAAAATTGGAC
GCGACGCAATTGGAGCCCTTTGGAAATGAGGACACAGCGGAGGTCAAGTATCGGACTATGAAATGGTGGCACTGT
GGAATGCTCATGATCGCAGAGAATGTTTCTGTCGGAATTCTGTCTTTGCCATCCGCAGTGGCTACCCTTGGAATG
GTTCCCGCTGCTATTATGATTTTGTTCGTCTCTGCTCTTTCATGGTATACTGGCTACGTCATTGGCCAATTCAAA
CTTCGCCATCCTGCAGTTCACAGCATGGGAGATGCCGGCGAGATCTTGATGGGTCCTTTCGGCCGTGAGTTGCTA
GGACTTGGCCAGCTGCTGCTGTTGATCTTCCTCATGGCGAGCAACATTTTGATGTTCAACATTCTGATGAATGTA
TTGACCGATCACGGTACCTGCACGTTGGTGTTTGGTGTCGTTGGACTGGTCATCTGCTTTTTGGGTGCCTTGCCT
CGTACCATGGACAAGGTCTACTGGATGTCCGTCATTTCATTCTTGAGTGTCTTCGTTGCGACAGTGTTGACCATG
ATCACCGTGGGAGTCGAGAGCAAAGGACATGTCAAGAACGAAGCGACAACGGATGTCAGCTTCCGCGAAGGTTTT
TTGGCGGTGACAAACATCATCTTCGCTTACCTCGCCCACGTTGCGTACTTTGGCTTCATGTCTGAAACAGAAGAC
CCACGTACATTCAACAAGTCACTCGCCATGCTTCAAATCATCGACACCACCCTGTACCTTGTTAGTGCACTGCTC
ATCTATCATTACGTGGGACCGGAGACAGCCACCAGCGTCGGCGTGCAATCGCCTGCCATTCTCTCTCTAAGCCCG
TTGATGGGCAAGATTGCCTGGGGTCTTTCAATTCCAACGACAATTCTTTCCGGAGTTGTCTTGGGTCACGTCGCG
TGCAAATACATCTATGTGCGTATGTTCCGTGGGTCAGACAAGATGCACGGCCGAACCTTACTGTCGATTGGGTCC
TGGGTCGGTATCTGTCTCGCAGTCTGGGTTGTTGCCTGGGTCGTGGCAGAATCTATTCCCGTGTTCAATGATCTG
CTGAGTCTGATTAGTGCGGTCTTTGGAAGTTGGTTTAGCTTCGGACTCCCGGCGATCTTTTGGTTCTATATGAAT
AAGGGCCGTTACTTCCAGAACTGGAAGAAGATTGTTTTGACGATTACCAATATTTTGGTCTTGGCTATTGCCTTT
GCTATTGTAGTGCGGGTTGGGACTATGGGTGTCAGGAGTCGCCATTCACGAAGACTCCAGTTCCAGAAGTTGGTC
TTGTGCCAATAA
Transcript >Pro_DTO377G3_2|g5265.t1
ATGTCGGACGAAAAGTATGTTGCGGACAGCAAGATCGAGAGACCACTCGAAAAAGACGTGGAGAAAAAATTGGAC
GCGACGCAATTGGAGCCCTTTGGAAATGAGGACACAGCGGAGGTCAAGTATCGGACTATGAAATGGTGGCACTGT
GGAATGCTCATGATCGCAGAGAATGTTTCTGTCGGAATTCTGTCTTTGCCATCCGCAGTGGCTACCCTTGGAATG
GTTCCCGCTGCTATTATGATTTTGTTCGTCTCTGCTCTTTCATGGTATACTGGCTACGTCATTGGCCAATTCAAA
CTTCGCCATCCTGCAGTTCACAGCATGGGAGATGCCGGCGAGATCTTGATGGGTCCTTTCGGCCGTGAGTTGCTA
GGACTTGGCCAGCTGCTGCTGTTGATCTTCCTCATGGCGAGCAACATTTTGATGTTCAACATTCTGATGAATGTA
TTGACCGATCACGGTACCTGCACGTTGGTGTTTGGTGTCGTTGGACTGGTCATCTGCTTTTTGGGTGCCTTGCCT
CGTACCATGGACAAGGTCTACTGGATGTCCGTCATTTCATTCTTGAGTGTCTTCGTTGCGACAGTGTTGACCATG
ATCACCGTGGGAGTCGAGAGCAAAGGACATGTCAAGAACGAAGCGACAACGGATGTCAGCTTCCGCGAAGGTTTT
TTGGCGGTGACAAACATCATCTTCGCTTACCTCGCCCACGTTGCGTACTTTGGCTTCATGTCTGAAACAGAAGAC
CCACGTACATTCAACAAGTCACTCGCCATGCTTCAAATCATCGACACCACCCTGTACCTTGTTAGTGCACTGCTC
ATCTATCATTACGTGGGACCGGAGACAGCCACCAGCGTCGGCGTGCAATCGCCTGCCATTCTCTCTCTAAGCCCG
TTGATGGGCAAGATTGCCTGGGGTCTTTCAATTCCAACGACAATTCTTTCCGGAGTTGTCTTGGGTCACGTCGCG
TGCAAATACATCTATGTGCGTATGTTCCGTGGGTCAGACAAGATGCACGGCCGAACCTTACTGTCGATTGGGTCC
TGGGTCGGTATCTGTCTCGCAGTCTGGGTTGTTGCCTGGGTCGTGGCAGAATCTATTCCCGTGTTCAATGATCTG
CTGAGTCTGATTAGTGCGGTCTTTGGAAGTTGGTTTAGCTTCGGACTCCCGGCGATCTTTTGGTTCTATATGAAT
AAGGGCCGTTACTTCCAGAACTGGAAGAAGATTGTTTTGACGATTACCAATATTTTGGTCTTGGCTATTGCCTTT
GCTATTGTAGTGCGGGTTGGGACTATGGGTGTCAGGAGTCGCCATTCACGAAGACTCCAGTTCCAGAAGTTGGTC
TTGTGCCAATAA
Gene >Pro_DTO377G3_2|g5265.t1
ATGTCGGACGAAAAGTATGTTGCGGACAGCAAGATCGAGAGACCACTCGAAAAAGACGTGGAGAAAAAATTGGAC
GCGACGCAATTGGAGCCCTTTGGAAATGAGGACACAGCGGAGGTCAAGTATCGGACTATGAAATGGTGGTGAGTT
GTTAATTCCTGCATAAAGATTGTGAATTCGACCATGGACATGGCTAATCAAGCTTGAAAAGGCACTGTGGAATGC
GTGAGTAGCTAAATTTGAGATCAAAAGCTTGGCTCCTAACATCAATTGCAGTCATGATCGCAGAGAATGTTTCTG
TCGGAATTCTGTCTTTGCCATCCGCAGTGGCTACCCTTGGAATGGTTCCGTATGTATTCTCTTCGACAGCTTCGA
GATCCCATAACTAACAATGTCAAACAGCGCTGCTATTATGATTTTGTTCGTCTCTGCTCTTTCATGGTATACTGG
CTACGTCATTGGCCAATTCAAACTTCGCCATCCTGCAGTTCACAGCATGGGAGATGCCGGCGAGATCTTGATGGG
TCCTTTCGGCCGTGAGTTGCTAGGACTTGGCCAGCTGCTGCTGTTGATCTTCCTCATGGCGAGCAACATTTTGAT
GTTCAACATTCTGATGAATGTATTGACCGATCACGGTACCTGCACGTTGGTGTTTGGTGTCGTTGGACTGGTCAT
CTGCTTTTTGGGTGCCTTGCCTCGTACCATGGACAAGGTCTACTGGATGTCCGTCATTTGTGAGTGCAGTCATGA
CACTTTTCAACTCAGATGAGAACTCAACTAATGTGTATGAAGCATTCTTGAGTGTCTTCGTTGCGACAGTGTTGA
CCATGATCACCGTGGGAGTCGAGAGCAAAGGACATGTCAAGAACGAAGCGACAACGGATGTCAGCTTCCGCGAAG
GTTTTTTGGCGGTGACAAACATCATCTTCGCTTACCGTAAGTTAAACAGTGAATCGCCAAATGATGACGGTGACC
AGCACTTGAAATAAACCGAGCTAATCCAGAGACCGATCTTATAGTCGCCCACGTTGCGTACTTTGGCTTCATGTC
TGAAACAGAAGACCCACGTACATTCAACAAGTCACTCGCCATGCTTCAAATCATCGACACCACCCTGTACCTTGT
TAGTGCACTGCTCATCTATCATTACGTGGGACCGGAGACAGCCACCAGCGTCGGCGTGCAATCGCCTGCCATTCT
CTCTCTAAGCCCGTTGATGGGCAAGATTGCCTGGGGTCTTTCAATTCCAACGGTGAGTTTATTCTTTTGGTTCGT
CTTCTGTATCCCACTTACTGATTCAATACAGACAATTCTTTCCGGAGTTGTCTTGGGTCACGTCGCGTGCAAATA
CATCTATGTGCGTATGTTCCGTGGGTCAGACAAGATGCACGGCCGAACCTTACTGTCGATTGGGTCCTGGGTCGG
TATCTGTCTCGCAGTCTGGGTTGTTGCCTGGGTCGTGGCAGAATCTATTCCCGTGTTCAATGATCTGCTGAGTCT
GATTGTAAGTTTATCGAATCTCACTCGACCGGGAACGTTTGCTGATGTGGAGATTACAGAGTGCGGTCTTTGGAA
GTTGGTTTAGCTGTAAGATTGACCCCCCTTTCCATCATTGAATTTCAAGATCTGAACAAGTGCTCACGTATCATT
AGTCGGACTCCCGGCGATCTTTTGGTTCTATATGAATAAGGGCCGTTACTTCCAGAACTGGAAGAAGATTGTTTT
GACGATTACCAATATTTTGGTCTTGGCTATTGCCTTTGCTATTGTAGGTATGCCCCTACTTATATCCAGTTATGG
TGGCTAATCCTTTCCAGTGCGGGTTGGGACTATGGGTGTCAGGAGTCGCCATTCACGAAGACTCCAGTTCCAGAA
GTTGGTCTTGTGCCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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