Protein ID | Pro_DTO377G3_2|g5245.t1 |
Gene name | |
Location | scaffold_12:289178..290778 |
Strand | + |
Gene length (bp) | 1600 |
Transcript length (bp) | 1284 |
Coding sequence length (bp) | 1284 |
Protein length (aa) | 428 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00704 | Glyco_hydro_18 | Glycosyl hydrolases family 18 | 2.8E-84 | 40 | 384 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0008150 | biological_process | No |
GO:0044238 | primary metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5245.t1 MQFVIPFLLGLSWLANAAYIPALRTKSTEIVSRDAGEYRSVAYFVNWAIYGRNFQPQDLPAERLTHVLYAFANLH PDTGEVYLSDPWADIDKHYANDSWNDSGDNVYGCVKQLFLLKKSNKKLKVLLSIGGWTYSPSFATAFDTEDGRQK FADSATDLLKNLGFDGIDVDYEYPATDDQADKFVDALRRLREALDSYGSSDAGNYHFLLTAASPAGPLHYRQERL KEMDQYLDFWNLMAYDYSGSWDTVAGHNANLHASTDDPASTPFNTDQALDYYIGEGVAANKIVLGMPLYGRAFTN TDGPGKPYNGVGSGTWENGIWDYKGLPLPDCNVTDLGQIGASYCYNQDSRLFISYDTPEIARIKAQYIQSRGLGG GMWWESSSDKTGEDSLITTVVDTLGGVDALEQSSNQLQYPDSKYVNLKNGFD* |
Coding | >Pro_DTO377G3_2|g5245.t1 ATGCAATTTGTCATTCCTTTCCTTCTAGGCCTGAGCTGGCTCGCCAACGCTGCCTACATCCCTGCCCTGAGGACC AAAAGCACTGAGATTGTATCTCGTGATGCTGGAGAGTACCGCTCGGTGGCATACTTTGTGAACTGGGCCATCTAC GGTCGTAACTTCCAACCCCAGGATCTTCCCGCTGAGCGACTGACTCATGTGCTTTATGCATTTGCCAACCTCCAC CCTGACACAGGCGAGGTCTACCTGTCGGACCCCTGGGCAGACATTGACAAGCACTATGCCAATGATTCCTGGAAT GATTCCGGAGACAATGTCTATGGCTGTGTCAAGCAGCTGTTCTTACTCAAGAAGAGCAACAAGAAGCTCAAGGTC CTTCTGTCGATTGGAGGATGGACCTATTCTCCCAGCTTTGCAACTGCCTTTGACACCGAGGATGGACGGCAGAAG TTTGCTGATTCTGCCACGGATCTGCTGAAGAACTTGGGATTCGACGGTATTGATGTTGATTATGAGTACCCTGCT ACCGATGATCAGGCGGACAAATTTGTCGATGCACTCCGACGACTTCGTGAGGCTTTGGATTCCTACGGCTCTAGT GACGCCGGAAACTATCATTTCCTGCTTACTGCCGCATCTCCTGCTGGCCCACTCCACTACCGTCAGGAACGTCTG AAAGAGATGGACCAGTACCTTGATTTCTGGAACCTCATGGCCTACGATTACTCCGGTAGCTGGGACACAGTTGCC GGTCATAACGCCAACCTCCACGCCTCGACCGACGACCCGGCCAGCACGCCATTTAACACGGACCAAGCCCTCGAC TATTACATCGGGGAAGGCGTAGCTGCAAACAAGATTGTGCTGGGAATGCCACTGTATGGTCGAGCGTTTACCAAT ACCGACGGCCCGGGAAAGCCATACAATGGCGTTGGATCAGGCACATGGGAGAATGGCATTTGGGACTACAAGGGC CTGCCTTTGCCCGACTGTAACGTGACAGACTTGGGTCAAATAGGTGCAAGCTACTGCTACAACCAGGACAGCCGA CTGTTCATCAGCTACGACACGCCCGAGATTGCGCGCATCAAGGCGCAGTACATCCAGTCCCGCGGACTGGGCGGT GGAATGTGGTGGGAGAGCAGCTCTGATAAGACTGGCGAGGACAGTTTGATTACAACTGTTGTGGATACACTTGGA GGTGTCGACGCTTTGGAGCAGAGCAGCAATCAGCTGCAGTACCCTGACTCCAAGTACGTTAACTTGAAGAACGGT TTCGATTAG |
Transcript | >Pro_DTO377G3_2|g5245.t1 ATGCAATTTGTCATTCCTTTCCTTCTAGGCCTGAGCTGGCTCGCCAACGCTGCCTACATCCCTGCCCTGAGGACC AAAAGCACTGAGATTGTATCTCGTGATGCTGGAGAGTACCGCTCGGTGGCATACTTTGTGAACTGGGCCATCTAC GGTCGTAACTTCCAACCCCAGGATCTTCCCGCTGAGCGACTGACTCATGTGCTTTATGCATTTGCCAACCTCCAC CCTGACACAGGCGAGGTCTACCTGTCGGACCCCTGGGCAGACATTGACAAGCACTATGCCAATGATTCCTGGAAT GATTCCGGAGACAATGTCTATGGCTGTGTCAAGCAGCTGTTCTTACTCAAGAAGAGCAACAAGAAGCTCAAGGTC CTTCTGTCGATTGGAGGATGGACCTATTCTCCCAGCTTTGCAACTGCCTTTGACACCGAGGATGGACGGCAGAAG TTTGCTGATTCTGCCACGGATCTGCTGAAGAACTTGGGATTCGACGGTATTGATGTTGATTATGAGTACCCTGCT ACCGATGATCAGGCGGACAAATTTGTCGATGCACTCCGACGACTTCGTGAGGCTTTGGATTCCTACGGCTCTAGT GACGCCGGAAACTATCATTTCCTGCTTACTGCCGCATCTCCTGCTGGCCCACTCCACTACCGTCAGGAACGTCTG AAAGAGATGGACCAGTACCTTGATTTCTGGAACCTCATGGCCTACGATTACTCCGGTAGCTGGGACACAGTTGCC GGTCATAACGCCAACCTCCACGCCTCGACCGACGACCCGGCCAGCACGCCATTTAACACGGACCAAGCCCTCGAC TATTACATCGGGGAAGGCGTAGCTGCAAACAAGATTGTGCTGGGAATGCCACTGTATGGTCGAGCGTTTACCAAT ACCGACGGCCCGGGAAAGCCATACAATGGCGTTGGATCAGGCACATGGGAGAATGGCATTTGGGACTACAAGGGC CTGCCTTTGCCCGACTGTAACGTGACAGACTTGGGTCAAATAGGTGCAAGCTACTGCTACAACCAGGACAGCCGA CTGTTCATCAGCTACGACACGCCCGAGATTGCGCGCATCAAGGCGCAGTACATCCAGTCCCGCGGACTGGGCGGT GGAATGTGGTGGGAGAGCAGCTCTGATAAGACTGGCGAGGACAGTTTGATTACAACTGTTGTGGATACACTTGGA GGTGTCGACGCTTTGGAGCAGAGCAGCAATCAGCTGCAGTACCCTGACTCCAAGTACGTTAACTTGAAGAACGGT TTCGATTAG |
Gene | >Pro_DTO377G3_2|g5245.t1 ATGCAATTTGTCATTCCTTTCCTTCTAGGCCTGAGCTGGCTCGCCAACGCTGCCTACATCCCTGCCCTGAGGACC AAAAGCACTGAGATTGTATCTCGTGATGCTGGAGAGTACCGCTCGGTGGCATACTTTGTGAACTGGGTAAGTTTA GACCATATACAGTGTGTCACTGGATGAAATTGGGGATATAAAAACCTCATCATCCAATCATTCAATTATCTAAAC AGGAAGCCACGCTAATTAAACTGTTCAGGCCATCTACGGTCGTAACTTCCAACCCCAGGATCTTCCCGCTGAGCG ACTGACTCATGTGCTTTATGCATTTGCCAACCTCCACCCTGACACAGGCGAGGTCTACCTGTCGGACCCCTGGGC AGACATTGACAAGCACTATGCCAATGATTCCTGGAATGATTCCGGAGACAATGTCTATGGCTGTGTCAAGCAGCT GTTCTTACTCAAGAAGAGCAACAAGAAGCTCAAGGTCCTTCTGTCGATTGGAGGATGGACCTATTCTCCCAGCTT TGCAACTGCCTTTGACACCGAGGATGGACGGCAGAAGTTTGCTGATTCTGCCACGGATCTGCTGAAGAACTTGGG ATTCGACGGTATTGATGTTGATTATGAGGTCAGTCTACAGTTGCCATTTGGAGATGTTGATGCTTATCAATACTA CAGTACCCTGCTACCGATGATCAGGCGGACAAATTTGTCGATGCACTCCGACGACTTCGTGAGGTATGTGATTTC TTGATGGATATCCATGGGTCCTGGCTAATCAAATTCAGGCTTTGGATTCCTACGGCTCTAGTGACGCCGGAAACT ATCATTTCCTGCTTACTGCCGCATCTCCTGCTGGTAAGTTTTATTTCCGTCCTTGGACAATTCCAAAATAACTGA CACAAGTAGGCCCACTCCACTACCGTCAGGAACGTCTGAAAGAGATGGACCAGTACCTTGATTTCTGGAACCTCA TGGCCTACGATTACTCCGGTAGCTGGGACACAGTTGCCGGTCATAACGCCAACCTCCACGCCTCGACCGACGACC CGGCCAGCACGCCATTTAACACGGACCAAGCCCTCGACTATTACATCGGGGAAGGCGTAGCTGCAAACAAGATTG TGCTGGGAATGCCACTGTATGGTCGAGCGTTTACCAATACCGACGGCCCGGGAAAGCCATACAATGGCGTTGGAT CAGGCACATGGGAGAATGGCATTTGGGACTACAAGGGCCTGCCTTTGCCCGACTGTAACGTGACAGACTTGGGTC AAATAGGTGCAAGCTACTGCTACAACCAGGACAGCCGACTGTTCATCAGCTACGACACGCCCGAGATTGCGCGCA TCAAGGCGCAGTACATCCAGTCCCGCGGACTGGGCGGTGGAATGTGGTGGGAGAGCAGCTCTGATAAGACTGGCG AGGACAGTTTGATTACAACTGTATGTGACGTTCTTTTGATATATGATTCAACCGTTTACTAACATATACACAGGT TGTGGATACACTTGGAGGTGTCGACGCTTTGGAGCAGAGCAGCAATCAGCTGCAGTACCCTGACTCCAAGTACGT TAACTTGAAGAACGGTTTCGATTAG |