Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5241.t1
Gene name
Locationscaffold_12:277689..279167
Strand+
Gene length (bp)1478
Transcript length (bp)1401
Coding sequence length (bp)1401
Protein length (aa) 467

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00240 ubiquitin Ubiquitin family 9.3E-20 16 86
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.0E-07 14 84
PF00627 UBA UBA/TS-N domain 1.0E-07 426 462
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 8.8E-05 32 101

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5241.t1
MADETATTEQPPITFTVKSSTDAKYTLTLPLTTLVSDLKQKLSTPENADTPAERQRLIYSGRVLKDTETLETYKI
KDGHTIHLVKSAASNQQRQNTAAQPNSASAAGGATPAIAGVPTNLAAGTGNNPLAGLTGARYAGFAQLPGAGLFG
PDGGMGPPPDTESMLNMLENPQFQSTINEALQNPAMIDMMIQQNPMLRDMGPGVRQMMESPEFRRMLTDPSSIRQ
MMQMQRAMGMGGGGLGGGDNAFPAPGVTNTTAEGAPGSEQQNAQINPFGQAAQNPLGNANPFGALFGANPFATPA
QPSATPGTTSPGGAQGADSTDRSTSAEGQTPQAAPNPFAALLNPAMFANAGQAGQGGANPFNPQQNPFLRDPALL
AQMMQGMGGQDAQGGAAGANPLAALLGSGGFGGGLGAPQPPADTRAPEDRYADQLRQLNDMGFFEFERNIEALRR
TGGSVQGAVEYLLSHP*
Coding >Pro_DTO377G3_2|g5241.t1
ATGGCCGACGAGACAGCTACCACAGAGCAGCCCCCCATCACCTTCACTGTCAAGTCATCCACCGATGCCAAATAC
ACTCTCACCCTCCCACTCACTACTCTGGTGTCAGATCTCAAGCAGAAGCTCTCAACCCCAGAAAATGCCGATACC
CCCGCAGAACGCCAGCGATTGATCTACTCGGGTAGGGTTTTGAAGGACACTGAGACACTGGAGACCTACAAGATC
AAGGATGGCCATACTATTCACCTCGTAAAGAGTGCTGCGAGCAACCAGCAGCGCCAAAACACAGCTGCTCAGCCC
AACTCAGCTTCTGCGGCCGGTGGAGCAACTCCAGCGATAGCTGGTGTCCCAACCAATCTAGCCGCTGGTACTGGT
AACAACCCACTTGCTGGATTGACTGGTGCGAGATATGCTGGATTCGCACAACTTCCCGGCGCGGGCCTTTTCGGC
CCTGATGGCGGGATGGGTCCTCCCCCAGATACTGAGTCGATGCTCAACATGCTCGAGAATCCTCAATTCCAATCG
ACCATCAACGAAGCTCTGCAAAACCCCGCTATGATCGACATGATGATCCAGCAGAATCCCATGCTTCGCGACATG
GGACCCGGAGTCCGGCAGATGATGGAAAGCCCAGAGTTCCGCCGCATGTTGACCGATCCGAGCTCGATTCGACAG
ATGATGCAAATGCAACGAGCTATGGGAATGGGTGGCGGTGGACTTGGTGGCGGTGATAATGCATTCCCCGCCCCG
GGGGTAACAAACACGACCGCTGAGGGAGCCCCAGGTTCAGAGCAACAGAACGCGCAAATAAATCCATTTGGGCAG
GCGGCTCAGAATCCTCTTGGAAACGCCAACCCTTTCGGTGCCCTCTTTGGAGCTAATCCGTTCGCAACCCCAGCC
CAGCCTTCTGCCACCCCAGGCACCACTTCACCCGGCGGTGCACAAGGTGCCGATTCTACGGACCGATCAACATCT
GCTGAGGGGCAGACTCCTCAGGCTGCTCCGAATCCCTTCGCAGCTCTTCTGAACCCGGCTATGTTCGCCAACGCT
GGACAAGCTGGCCAGGGCGGCGCGAACCCGTTCAATCCTCAGCAAAATCCGTTCCTACGTGACCCGGCGCTACTT
GCCCAAATGATGCAGGGAATGGGTGGACAGGACGCACAAGGTGGGGCTGCCGGTGCAAACCCTCTGGCTGCTCTA
CTTGGCAGTGGTGGTTTCGGAGGTGGTCTCGGAGCACCACAGCCGCCTGCAGACACCCGCGCCCCGGAGGATAGA
TATGCCGATCAGTTGCGGCAGTTGAATGATATGGGATTCTTTGAGTTCGAGCGGAACATTGAAGCCCTGCGTCGC
ACAGGTGGCAGCGTTCAGGGAGCGGTGGAGTACCTCCTCAGCCACCCATGA
Transcript >Pro_DTO377G3_2|g5241.t1
ATGGCCGACGAGACAGCTACCACAGAGCAGCCCCCCATCACCTTCACTGTCAAGTCATCCACCGATGCCAAATAC
ACTCTCACCCTCCCACTCACTACTCTGGTGTCAGATCTCAAGCAGAAGCTCTCAACCCCAGAAAATGCCGATACC
CCCGCAGAACGCCAGCGATTGATCTACTCGGGTAGGGTTTTGAAGGACACTGAGACACTGGAGACCTACAAGATC
AAGGATGGCCATACTATTCACCTCGTAAAGAGTGCTGCGAGCAACCAGCAGCGCCAAAACACAGCTGCTCAGCCC
AACTCAGCTTCTGCGGCCGGTGGAGCAACTCCAGCGATAGCTGGTGTCCCAACCAATCTAGCCGCTGGTACTGGT
AACAACCCACTTGCTGGATTGACTGGTGCGAGATATGCTGGATTCGCACAACTTCCCGGCGCGGGCCTTTTCGGC
CCTGATGGCGGGATGGGTCCTCCCCCAGATACTGAGTCGATGCTCAACATGCTCGAGAATCCTCAATTCCAATCG
ACCATCAACGAAGCTCTGCAAAACCCCGCTATGATCGACATGATGATCCAGCAGAATCCCATGCTTCGCGACATG
GGACCCGGAGTCCGGCAGATGATGGAAAGCCCAGAGTTCCGCCGCATGTTGACCGATCCGAGCTCGATTCGACAG
ATGATGCAAATGCAACGAGCTATGGGAATGGGTGGCGGTGGACTTGGTGGCGGTGATAATGCATTCCCCGCCCCG
GGGGTAACAAACACGACCGCTGAGGGAGCCCCAGGTTCAGAGCAACAGAACGCGCAAATAAATCCATTTGGGCAG
GCGGCTCAGAATCCTCTTGGAAACGCCAACCCTTTCGGTGCCCTCTTTGGAGCTAATCCGTTCGCAACCCCAGCC
CAGCCTTCTGCCACCCCAGGCACCACTTCACCCGGCGGTGCACAAGGTGCCGATTCTACGGACCGATCAACATCT
GCTGAGGGGCAGACTCCTCAGGCTGCTCCGAATCCCTTCGCAGCTCTTCTGAACCCGGCTATGTTCGCCAACGCT
GGACAAGCTGGCCAGGGCGGCGCGAACCCGTTCAATCCTCAGCAAAATCCGTTCCTACGTGACCCGGCGCTACTT
GCCCAAATGATGCAGGGAATGGGTGGACAGGACGCACAAGGTGGGGCTGCCGGTGCAAACCCTCTGGCTGCTCTA
CTTGGCAGTGGTGGTTTCGGAGGTGGTCTCGGAGCACCACAGCCGCCTGCAGACACCCGCGCCCCGGAGGATAGA
TATGCCGATCAGTTGCGGCAGTTGAATGATATGGGATTCTTTGAGTTCGAGCGGAACATTGAAGCCCTGCGTCGC
ACAGGTGGCAGCGTTCAGGGAGCGGTGGAGTACCTCCTCAGCCACCCATGA
Gene >Pro_DTO377G3_2|g5241.t1
ATGGCCGACGAGACAGCTACCACAGAGCAGCCCCCCATCACCTTCACTGTCAAGTCATCCACCGATGCCAAATAC
ACTCTCACCCTCCCACTCACTACTCTGGTGTCAGATCTCAAGCAGAAGCTCTCAACCCCAGAAAATGCCGATACC
CCCGCAGAACGCCAGCGATTGATCTACTCGGGTAGGGTTTTGAAGGACACTGAGACACTGGAGACCTACAAGATC
AAGGATGGCCATACTATTCACCTCGTAAAGAGTGCTGCGAGCAACCAGCAGCGCCAAAACACAGCTGCTCAGCCC
AACTCAGCTTCTGCGGCCGGTGGAGCAACTCCAGCGATAGCTGGTGTCCCAACCAATCTAGCCGCTGGTACTGGT
AACAACCCACTTGCTGGATTGACTGGTGCGAGATATGCTGGATTCGCACAACTTCCCGGCGCGGGCCTTTTCGGC
CCTGATGGCGGGGTAAGTGAGCTATTATGGCGGATGGAAGCTATTCAGCAATGCCTCCAACAGATAGCTAACATT
CTTTGGCTACTTAGATGGGTCCTCCCCCAGATACTGAGTCGATGCTCAACATGCTCGAGAATCCTCAATTCCAAT
CGACCATCAACGAAGCTCTGCAAAACCCCGCTATGATCGACATGATGATCCAGCAGAATCCCATGCTTCGCGACA
TGGGACCCGGAGTCCGGCAGATGATGGAAAGCCCAGAGTTCCGCCGCATGTTGACCGATCCGAGCTCGATTCGAC
AGATGATGCAAATGCAACGAGCTATGGGAATGGGTGGCGGTGGACTTGGTGGCGGTGATAATGCATTCCCCGCCC
CGGGGGTAACAAACACGACCGCTGAGGGAGCCCCAGGTTCAGAGCAACAGAACGCGCAAATAAATCCATTTGGGC
AGGCGGCTCAGAATCCTCTTGGAAACGCCAACCCTTTCGGTGCCCTCTTTGGAGCTAATCCGTTCGCAACCCCAG
CCCAGCCTTCTGCCACCCCAGGCACCACTTCACCCGGCGGTGCACAAGGTGCCGATTCTACGGACCGATCAACAT
CTGCTGAGGGGCAGACTCCTCAGGCTGCTCCGAATCCCTTCGCAGCTCTTCTGAACCCGGCTATGTTCGCCAACG
CTGGACAAGCTGGCCAGGGCGGCGCGAACCCGTTCAATCCTCAGCAAAATCCGTTCCTACGTGACCCGGCGCTAC
TTGCCCAAATGATGCAGGGAATGGGTGGACAGGACGCACAAGGTGGGGCTGCCGGTGCAAACCCTCTGGCTGCTC
TACTTGGCAGTGGTGGTTTCGGAGGTGGTCTCGGAGCACCACAGCCGCCTGCAGACACCCGCGCCCCGGAGGATA
GATATGCCGATCAGTTGCGGCAGTTGAATGATATGGGATTCTTTGAGTTCGAGCGGAACATTGAAGCCCTGCGTC
GCACAGGTGGCAGCGTTCAGGGAGCGGTGGAGTACCTCCTCAGCCACCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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