Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5224.t1
Gene name
Locationscaffold_12:231833..233037
Strand+
Gene length (bp)1204
Transcript length (bp)1101
Coding sequence length (bp)1101
Protein length (aa) 367

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 2.2E-107 7 362

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5224.t1
MAKNSNILILPGDGIGPEIMAEAVKVLKFFETPQRKFELRQELIGGCSIDAHGKSVTEEVKQAALDSDAVLFAAV
GGPKWDNQRRGLDGPEGGLLQVRKAMDIYANLRPCSSTSPSASIAKEFSPFKQEVIEGVDFVVVRENCGGAYFGR
KVEEETYAMDEWGYSEAEIQRITRLSAEVALRHNPPWPVISLDKANVLASSRLWRRVVEKTMAAEYPQVKLVHQL
ADSASLILATNPRSLNGVILADNTFGDMISDQAGSIVGTLGVLPSASLNGLPGDKTLKTRPYGLYEPTHGSAPTI
AGQNIANPVAMILCVALMFRYSLSMEDEARRVEDAVRKVLDSGIRTPDLGGKAGTNEVGDAIVSAL*
Coding >Pro_DTO377G3_2|g5224.t1
ATGGCCAAAAACTCCAACATCCTCATCCTACCCGGCGATGGCATCGGCCCTGAGATCATGGCCGAAGCCGTGAAG
GTCCTCAAGTTCTTTGAGACTCCCCAGCGCAAGTTCGAACTGCGCCAGGAGTTGATTGGAGGTTGCAGCATTGAC
GCTCATGGCAAGTCTGTGACCGAAGAAGTCAAGCAGGCAGCTCTGGACTCAGATGCAGTGCTCTTCGCCGCAGTT
GGGGGCCCGAAATGGGACAATCAACGTCGTGGTCTTGATGGGCCCGAAGGAGGACTACTCCAAGTCCGAAAGGCT
ATGGATATATATGCAAACTTACGCCCGTGCTCTTCCACCTCGCCAAGTGCCTCTATCGCCAAGGAGTTCAGCCCG
TTCAAGCAGGAGGTTATTGAAGGTGTTGATTTTGTTGTTGTGCGGGAGAACTGCGGAGGTGCCTATTTTGGCCGC
AAGGTCGAAGAAGAAACATACGCAATGGATGAATGGGGTTACTCCGAAGCCGAGATCCAGCGAATCACTCGTCTA
TCCGCCGAAGTAGCACTGCGACACAATCCCCCTTGGCCTGTGATCTCACTAGACAAGGCGAATGTACTAGCTTCT
TCGCGACTCTGGCGCCGGGTAGTGGAAAAGACTATGGCGGCCGAATACCCGCAAGTGAAATTGGTGCACCAGCTT
GCCGACTCCGCGTCATTGATTCTGGCAACGAACCCGCGATCCCTGAATGGCGTTATCCTGGCCGACAACACCTTC
GGCGACATGATCTCTGATCAAGCTGGGTCGATTGTGGGTACGCTGGGTGTATTGCCAAGTGCCAGTCTCAACGGT
CTGCCTGGTGATAAGACACTGAAGACACGACCTTACGGGCTGTACGAGCCTACACATGGATCTGCTCCGACTATT
GCGGGACAAAACATTGCCAACCCGGTTGCAATGATCCTCTGCGTCGCGCTTATGTTCCGATACTCTTTGAGCATG
GAAGATGAGGCTCGACGTGTGGAGGATGCGGTGCGTAAAGTGTTGGATTCAGGGATTCGGACGCCTGACCTTGGG
GGCAAGGCTGGGACTAACGAAGTGGGCGATGCGATTGTGTCTGCACTATAG
Transcript >Pro_DTO377G3_2|g5224.t1
ATGGCCAAAAACTCCAACATCCTCATCCTACCCGGCGATGGCATCGGCCCTGAGATCATGGCCGAAGCCGTGAAG
GTCCTCAAGTTCTTTGAGACTCCCCAGCGCAAGTTCGAACTGCGCCAGGAGTTGATTGGAGGTTGCAGCATTGAC
GCTCATGGCAAGTCTGTGACCGAAGAAGTCAAGCAGGCAGCTCTGGACTCAGATGCAGTGCTCTTCGCCGCAGTT
GGGGGCCCGAAATGGGACAATCAACGTCGTGGTCTTGATGGGCCCGAAGGAGGACTACTCCAAGTCCGAAAGGCT
ATGGATATATATGCAAACTTACGCCCGTGCTCTTCCACCTCGCCAAGTGCCTCTATCGCCAAGGAGTTCAGCCCG
TTCAAGCAGGAGGTTATTGAAGGTGTTGATTTTGTTGTTGTGCGGGAGAACTGCGGAGGTGCCTATTTTGGCCGC
AAGGTCGAAGAAGAAACATACGCAATGGATGAATGGGGTTACTCCGAAGCCGAGATCCAGCGAATCACTCGTCTA
TCCGCCGAAGTAGCACTGCGACACAATCCCCCTTGGCCTGTGATCTCACTAGACAAGGCGAATGTACTAGCTTCT
TCGCGACTCTGGCGCCGGGTAGTGGAAAAGACTATGGCGGCCGAATACCCGCAAGTGAAATTGGTGCACCAGCTT
GCCGACTCCGCGTCATTGATTCTGGCAACGAACCCGCGATCCCTGAATGGCGTTATCCTGGCCGACAACACCTTC
GGCGACATGATCTCTGATCAAGCTGGGTCGATTGTGGGTACGCTGGGTGTATTGCCAAGTGCCAGTCTCAACGGT
CTGCCTGGTGATAAGACACTGAAGACACGACCTTACGGGCTGTACGAGCCTACACATGGATCTGCTCCGACTATT
GCGGGACAAAACATTGCCAACCCGGTTGCAATGATCCTCTGCGTCGCGCTTATGTTCCGATACTCTTTGAGCATG
GAAGATGAGGCTCGACGTGTGGAGGATGCGGTGCGTAAAGTGTTGGATTCAGGGATTCGGACGCCTGACCTTGGG
GGCAAGGCTGGGACTAACGAAGTGGGCGATGCGATTGTGTCTGCACTATAG
Gene >Pro_DTO377G3_2|g5224.t1
ATGGCCAAAAACTCCAACATCCTCATCCTACCCGGCGATGGCATCGGCCCTGAGATCATGGCCGAAGCCGTGAAG
GTCCTCAAGTTCTTTGAGACTCCCCAGCGCAAGTTCGAACTGCGCCAGGAGTTGATTGGAGGTTGCAGCATTGAC
GCTCATGGCAAGTCTGTGACCGAAGAAGTCAAGCAGGCAGCTCTGGACTCAGATGCAGTGCTCTTCGCCGCAGTT
GGGGGCCCGAAATGGGACAATCAACGTCGTGGTCTTGATGGGCCCGAAGGAGGACTACTCCAAGTCCGAAAGGCT
ATGGATATATATGCAAACTTACGCCCGTGCTCTTCCACCTCGCCAAGTGCCTCTATCGCCAAGGAGTTCAGCCCG
TTCAAGCAGGAGGTTATTGAAGGTGTTGATTTTGTTGTTGTGCGGGAGAACTGCGGAGGTGCCTATTTTGGCCGC
AAGGTCGAAGAAGAAACATACGGTGGGTTGCACTGAGATTATATTGTCATTGAATAGCTAACTTTTCTTCTACCA
CAGCAATGGATGAATGGGGTTACTCCGAAGCCGAGATCCAGCGAATCACTCGTCTATCCGCCGAAGTAGCACTGC
GACACAATCCCCCTTGGCCTGTGATCTCACTAGACAAGGCGAATGTACTAGCTTCTTCGCGACTCTGGCGCCGGG
TAGTGGAAAAGACTATGGCGGCCGAATACCCGCAAGTGAAATTGGTGCACCAGCTTGCCGACTCCGCGTCATTGA
TTCTGGCAACGAACCCGCGATCCCTGAATGGCGTTATCCTGGCCGACAACACCTTCGGCGACATGATCTCTGATC
AAGCTGGGTCGATTGTGGGTACGCTGGGTGTATTGCCAAGTGCCAGTCTCAACGGTCTGCCTGGTGATAAGACAC
TGAAGACACGACCTTACGGGCTGTACGAGCCTACACATGGATCTGCTCCGACGTAAGTGCTAGAAATATGATAAG
AAAGCTGTTCTGACTTTGTTATAGTATTGCGGGACAAAACATTGCCAACCCGGTTGCAATGATCCTCTGCGTCGC
GCTTATGTTCCGATACTCTTTGAGCATGGAAGATGAGGCTCGACGTGTGGAGGATGCGGTGCGTAAAGTGTTGGA
TTCAGGGATTCGGACGCCTGACCTTGGGGGCAAGGCTGGGACTAACGAAGTGGGCGATGCGATTGTGTCTGCACT
ATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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