Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5214.t1
Gene name
Locationscaffold_12:200387..201850
Strand-
Gene length (bp)1463
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02453 Reticulon Reticulon 4.6E-24 66 222

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

Domain # Start End Length
1 74 96 22
2 103 122 19
3 165 187 22
4 189 211 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5214.t1
MASGDVTYPNTGSIRDVITKGPIVNNVKSEASRTSDEFRDLKNSRVTPSNTTADGQPLTHYHSLMYSLLSWEQPR
ATAVSYASMICFIFAARYMPLLRWAFKFLYMSLGVTATVEIAGHLILKRGIASGFRPRRYYTVPKEVIEGVLEDL
EQLVDFFLIEFQRILFAENVLHTVFAFNAAFIGYWLLRFLPFWGVALIAVTTTYFTPLIYISNREFIDEQITNYQ
EIINSQTNQLRDMAGERTSHATDLVKQYVGEYSSKAQGYIAHRRSASRETKLASPIKRETVEPAANFTAPVAKPA
VEPVIKHEDFPEAPKAAPVAQALESGIVASVEPAEQAKGREPLLAI*
Coding >Pro_DTO377G3_2|g5214.t1
ATGGCTTCTGGTGACGTGACCTACCCTAACACGGGCAGCATCCGCGATGTTATTACCAAGGGCCCAATTGTCAAT
AATGTGAAGTCCGAAGCATCCCGCACCAGCGATGAGTTCCGCGATCTGAAAAACTCGCGTGTGACCCCTTCGAAC
ACCACCGCCGATGGTCAACCATTGACTCACTACCACTCTTTGATGTACAGCCTTTTGAGCTGGGAACAACCCCGT
GCGACCGCCGTTTCCTACGCCAGCATGATCTGTTTCATCTTCGCCGCTCGTTACATGCCTCTCCTCCGCTGGGCC
TTCAAGTTCCTGTACATGTCGTTGGGAGTGACCGCCACTGTCGAGATTGCTGGCCATCTTATCCTCAAGCGGGGA
ATCGCCAGTGGATTCCGCCCCCGCCGTTACTACACTGTCCCCAAGGAAGTTATTGAGGGTGTCCTCGAGGACCTC
GAGCAGCTCGTGGACTTTTTCTTGATCGAGTTCCAGCGCATCCTGTTCGCTGAGAATGTCCTCCACACCGTTTTT
GCTTTCAATGCTGCTTTCATCGGCTACTGGCTGCTCCGTTTCCTTCCCTTCTGGGGCGTGGCCTTGATTGCTGTG
ACCACCACATACTTCACCCCCCTGATCTACATCAGCAACCGTGAATTCATCGACGAGCAGATTACCAACTACCAG
GAGATCATCAACTCCCAGACCAACCAGCTTCGAGACATGGCTGGCGAGCGTACCTCTCACGCCACCGACTTGGTG
AAGCAGTATGTCGGTGAGTACAGCTCTAAGGCTCAAGGTTACATCGCCCACCGACGCTCTGCCTCCCGGGAGACC
AAGCTTGCGAGCCCAATCAAGCGTGAGACCGTTGAGCCCGCTGCCAACTTCACTGCCCCTGTCGCCAAGCCTGCC
GTCGAGCCCGTTATCAAGCACGAGGACTTCCCGGAGGCCCCCAAGGCCGCTCCTGTCGCTCAGGCTCTCGAGTCT
GGCATTGTTGCGTCTGTTGAGCCGGCAGAGCAGGCGAAGGGTCGTGAGCCTCTTCTGGCTATCTGA
Transcript >Pro_DTO377G3_2|g5214.t1
ATGGCTTCTGGTGACGTGACCTACCCTAACACGGGCAGCATCCGCGATGTTATTACCAAGGGCCCAATTGTCAAT
AATGTGAAGTCCGAAGCATCCCGCACCAGCGATGAGTTCCGCGATCTGAAAAACTCGCGTGTGACCCCTTCGAAC
ACCACCGCCGATGGTCAACCATTGACTCACTACCACTCTTTGATGTACAGCCTTTTGAGCTGGGAACAACCCCGT
GCGACCGCCGTTTCCTACGCCAGCATGATCTGTTTCATCTTCGCCGCTCGTTACATGCCTCTCCTCCGCTGGGCC
TTCAAGTTCCTGTACATGTCGTTGGGAGTGACCGCCACTGTCGAGATTGCTGGCCATCTTATCCTCAAGCGGGGA
ATCGCCAGTGGATTCCGCCCCCGCCGTTACTACACTGTCCCCAAGGAAGTTATTGAGGGTGTCCTCGAGGACCTC
GAGCAGCTCGTGGACTTTTTCTTGATCGAGTTCCAGCGCATCCTGTTCGCTGAGAATGTCCTCCACACCGTTTTT
GCTTTCAATGCTGCTTTCATCGGCTACTGGCTGCTCCGTTTCCTTCCCTTCTGGGGCGTGGCCTTGATTGCTGTG
ACCACCACATACTTCACCCCCCTGATCTACATCAGCAACCGTGAATTCATCGACGAGCAGATTACCAACTACCAG
GAGATCATCAACTCCCAGACCAACCAGCTTCGAGACATGGCTGGCGAGCGTACCTCTCACGCCACCGACTTGGTG
AAGCAGTATGTCGGTGAGTACAGCTCTAAGGCTCAAGGTTACATCGCCCACCGACGCTCTGCCTCCCGGGAGACC
AAGCTTGCGAGCCCAATCAAGCGTGAGACCGTTGAGCCCGCTGCCAACTTCACTGCCCCTGTCGCCAAGCCTGCC
GTCGAGCCCGTTATCAAGCACGAGGACTTCCCGGAGGCCCCCAAGGCCGCTCCTGTCGCTCAGGCTCTCGAGTCT
GGCATTGTTGCGTCTGTTGAGCCGGCAGAGCAGGCGAAGGGTCGTGAGCCTCTTCTGGCTATCTGA
Gene >Pro_DTO377G3_2|g5214.t1
ATGGCTTCTGGTGACGTGACCTACCCTAACACGGGCAGTAAGGTAAGAGAACCAAGTCAATTCCATTCGACAACA
TGAATATGCTAACCTCAGTCACCCCACAGTATTGCGCTCTTTTCTTTTCCCTAGATTTCGTGGGAGAGACTGACC
TTGACCCTTTTGCGTTCAGGCATCCGCGATGTTATTACCAAGGGTAAGCAGGCGTCTGAAAGTCTCCGAAAGTCG
ATCAAAGCAAGCTGACTAGTTCATCCACAGGCCCAATTGTCAATAATGTGAAGTCCGAAGCATCCCGCACCAGCG
ATGAGTTCCGCGATCTGAAAAACTCGCGTGTGACCCCTTCGAACACCACCGCCGATGGTCAACCATTGACTCGTA
GGTCATAAGAACTGGATTAATTGGGTGATGGGATATTGACAAGTGTCTAGACTACCACTCTTTGATGTACAGCCT
TTTGAGCGTGAGTTGTCGCCCGAGTCTTCAAGTTGGATAGCTTGCTAATCTTTCTCTGGATATAGTGGGAACAAC
CCCGTGCGACCGCCGTTTCCTACGCCAGCATGATCTGTTTCATCTTCGCCGCTCGTTACATGCCTCTCCTCCGCT
GGGCCTTCAAGTTCCTGTACATGTCGTTGGGAGGTGAGTTGGTCGCGTGACCTACGGTCAACAGAGTGGTTGGTT
AACAATTGTGTTTAGTGACCGCCACTGTCGAGATTGCTGGCCATCTTATCCTCAAGCGGGGAATCGCCAGTGGAT
TCCGCCCCCGCCGTTACTACACTGTCCCCAAGGAAGTTATTGAGGGTGTCCTCGAGGACCTCGAGCAGCTCGTGG
ACTTTTTCTTGATCGAGTTCCAGCGCATCCTGTTCGCTGAGAATGTCCTCCACACCGTTTTTGTAGGTTGCAACT
TTGTGAACTTATCAACGAAGATAAAAAGGCAGAGACTAACGGCTTAGGCTTTCAATGCTGCTTTCATCGGCTACT
GGCTGCTCCGTTTCCTTCCCTTCTGGGGCGTGGCCTTGATTGCTGTGACCACCACATACTTCACCCCCCTGATCT
ACATCAGCAACCGTGAATTCATCGACGAGCAGATTACCAACTACCAGGAGATCATCAACTCCCAGACCAACCAGC
TTCGAGACATGGCTGGCGAGCGTACCTCTCACGCCACCGACTTGGTGAAGCAGTATGTCGGTGAGTACAGCTCTA
AGGCTCAAGGTTACATCGCCCACCGACGCTCTGCCTCCCGGGAGACCAAGCTTGCGAGCCCAATCAAGCGTGAGA
CCGTTGAGCCCGCTGCCAACTTCACTGCCCCTGTCGCCAAGCCTGCCGTCGAGCCCGTTATCAAGCACGAGGACT
TCCCGGAGGCCCCCAAGGCCGCTCCTGTCGCTCAGGCTCTCGAGTCTGGCATTGTTGCGTCTGTTGAGCCGGCAG
AGCAGGCGAAGGGTCGTGAGCCTCTTCTGGCTATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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