Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5214.t1
Gene name
Location	scaffold_12:200387..201850
Strand	-
Gene length (bp)	1463
Transcript length (bp)	1041
Coding sequence length (bp)	1041
Protein length (aa)	347

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02453	Reticulon	Reticulon	4.1E-24	66	222

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	74	96	22
2	103	122	19
3	165	187	22
4	189	211	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5214.t1 MASGDVTYPNTGSIRDVITKGPIVNNVKSEASRTSDEFRDLKNSRVTPSNTTADGQPLTHYHSLMYSLLSWEQPR ATAVSYASMICFIFAARYMPLLRWAFKFLYMSLGVTATVEIAGHLILKRGIASGFRPRRYYTVPKEVIEGVLEDL EQLVDFFLIEFQRILFAENVLHTVFAFNAAFIGYWLLRFLPFWGVALIAVTTTYFTPLIYISNREFIDEQITNYQ EIINSQTNQLRDMAGERTSHATDLVKQYVGEYSSKAQGYIAHRRSASRETKLASPIKRETVEPAANFTAPVAKPA VEPVIKHEDFPEAPKAAPVAQALESGIVASVEPAEQAKGREPLLAI*
Coding	>Pro_DTO377G3_2\|g5214.t1 ATGGCTTCTGGTGACGTGACCTACCCTAACACGGGCAGCATCCGCGATGTTATTACCAAGGGCCCAATTGTCAAT AATGTGAAGTCCGAAGCATCCCGCACCAGCGATGAGTTCCGCGATCTGAAAAACTCGCGTGTGACCCCTTCGAAC ACCACCGCCGATGGTCAACCATTGACTCACTACCACTCTTTGATGTACAGCCTTTTGAGCTGGGAACAACCCCGT GCGACCGCCGTTTCCTACGCCAGCATGATCTGTTTCATCTTCGCCGCTCGTTACATGCCTCTCCTCCGCTGGGCC TTCAAGTTCCTGTACATGTCGTTGGGAGTGACCGCCACTGTCGAGATTGCTGGCCATCTTATCCTCAAGCGGGGA ATCGCCAGTGGATTCCGCCCCCGCCGTTACTACACTGTCCCCAAGGAAGTTATTGAGGGTGTCCTCGAGGACCTC GAGCAGCTCGTGGACTTTTTCTTGATCGAGTTCCAGCGCATCCTGTTCGCTGAGAATGTCCTCCACACCGTTTTT GCTTTCAATGCTGCTTTCATCGGCTACTGGCTGCTCCGTTTCCTTCCCTTCTGGGGCGTGGCCTTGATTGCTGTG ACCACCACATACTTCACCCCCCTGATCTACATCAGCAACCGTGAATTCATCGACGAGCAGATTACCAACTACCAG GAGATCATCAACTCCCAGACCAACCAGCTTCGAGACATGGCTGGCGAGCGTACCTCTCACGCCACCGACTTGGTG AAGCAGTATGTCGGTGAGTACAGCTCTAAGGCTCAAGGTTACATCGCCCACCGACGCTCTGCCTCCCGGGAGACC AAGCTTGCGAGCCCAATCAAGCGTGAGACCGTTGAGCCCGCTGCCAACTTCACTGCCCCTGTCGCCAAGCCTGCC GTCGAGCCCGTTATCAAGCACGAGGACTTCCCGGAGGCCCCCAAGGCCGCTCCTGTCGCTCAGGCTCTCGAGTCT GGCATTGTTGCGTCTGTTGAGCCGGCAGAGCAGGCGAAGGGTCGTGAGCCTCTTCTGGCTATCTGA
Transcript	>Pro_DTO377G3_2\|g5214.t1 ATGGCTTCTGGTGACGTGACCTACCCTAACACGGGCAGCATCCGCGATGTTATTACCAAGGGCCCAATTGTCAAT AATGTGAAGTCCGAAGCATCCCGCACCAGCGATGAGTTCCGCGATCTGAAAAACTCGCGTGTGACCCCTTCGAAC ACCACCGCCGATGGTCAACCATTGACTCACTACCACTCTTTGATGTACAGCCTTTTGAGCTGGGAACAACCCCGT GCGACCGCCGTTTCCTACGCCAGCATGATCTGTTTCATCTTCGCCGCTCGTTACATGCCTCTCCTCCGCTGGGCC TTCAAGTTCCTGTACATGTCGTTGGGAGTGACCGCCACTGTCGAGATTGCTGGCCATCTTATCCTCAAGCGGGGA ATCGCCAGTGGATTCCGCCCCCGCCGTTACTACACTGTCCCCAAGGAAGTTATTGAGGGTGTCCTCGAGGACCTC GAGCAGCTCGTGGACTTTTTCTTGATCGAGTTCCAGCGCATCCTGTTCGCTGAGAATGTCCTCCACACCGTTTTT GCTTTCAATGCTGCTTTCATCGGCTACTGGCTGCTCCGTTTCCTTCCCTTCTGGGGCGTGGCCTTGATTGCTGTG ACCACCACATACTTCACCCCCCTGATCTACATCAGCAACCGTGAATTCATCGACGAGCAGATTACCAACTACCAG GAGATCATCAACTCCCAGACCAACCAGCTTCGAGACATGGCTGGCGAGCGTACCTCTCACGCCACCGACTTGGTG AAGCAGTATGTCGGTGAGTACAGCTCTAAGGCTCAAGGTTACATCGCCCACCGACGCTCTGCCTCCCGGGAGACC AAGCTTGCGAGCCCAATCAAGCGTGAGACCGTTGAGCCCGCTGCCAACTTCACTGCCCCTGTCGCCAAGCCTGCC GTCGAGCCCGTTATCAAGCACGAGGACTTCCCGGAGGCCCCCAAGGCCGCTCCTGTCGCTCAGGCTCTCGAGTCT GGCATTGTTGCGTCTGTTGAGCCGGCAGAGCAGGCGAAGGGTCGTGAGCCTCTTCTGGCTATCTGA
Gene	>Pro_DTO377G3_2\|g5214.t1 ATGGCTTCTGGTGACGTGACCTACCCTAACACGGGCAGTAAGGTAAGAGAACCAAGTCAATTCCATTCGACAACA TGAATATGCTAACCTCAGTCACCCCACAGTATTGCGCTCTTTTCTTTTCCCTAGATTTCGTGGGAGAGACTGACC TTGACCCTTTTGCGTTCAGGCATCCGCGATGTTATTACCAAGGGTAAGCAGGCGTCTGAAAGTCTCCGAAAGTCG ATCAAAGCAAGCTGACTAGTTCATCCACAGGCCCAATTGTCAATAATGTGAAGTCCGAAGCATCCCGCACCAGCG ATGAGTTCCGCGATCTGAAAAACTCGCGTGTGACCCCTTCGAACACCACCGCCGATGGTCAACCATTGACTCGTA GGTCATAAGAACTGGATTAATTGGGTGATGGGATATTGACAAGTGTCTAGACTACCACTCTTTGATGTACAGCCT TTTGAGCGTGAGTTGTCGCCCGAGTCTTCAAGTTGGATAGCTTGCTAATCTTTCTCTGGATATAGTGGGAACAAC CCCGTGCGACCGCCGTTTCCTACGCCAGCATGATCTGTTTCATCTTCGCCGCTCGTTACATGCCTCTCCTCCGCT GGGCCTTCAAGTTCCTGTACATGTCGTTGGGAGGTGAGTTGGTCGCGTGACCTACGGTCAACAGAGTGGTTGGTT AACAATTGTGTTTAGTGACCGCCACTGTCGAGATTGCTGGCCATCTTATCCTCAAGCGGGGAATCGCCAGTGGAT TCCGCCCCCGCCGTTACTACACTGTCCCCAAGGAAGTTATTGAGGGTGTCCTCGAGGACCTCGAGCAGCTCGTGG ACTTTTTCTTGATCGAGTTCCAGCGCATCCTGTTCGCTGAGAATGTCCTCCACACCGTTTTTGTAGGTTGCAACT TTGTGAACTTATCAACGAAGATAAAAAGGCAGAGACTAACGGCTTAGGCTTTCAATGCTGCTTTCATCGGCTACT GGCTGCTCCGTTTCCTTCCCTTCTGGGGCGTGGCCTTGATTGCTGTGACCACCACATACTTCACCCCCCTGATCT ACATCAGCAACCGTGAATTCATCGACGAGCAGATTACCAACTACCAGGAGATCATCAACTCCCAGACCAACCAGC TTCGAGACATGGCTGGCGAGCGTACCTCTCACGCCACCGACTTGGTGAAGCAGTATGTCGGTGAGTACAGCTCTA AGGCTCAAGGTTACATCGCCCACCGACGCTCTGCCTCCCGGGAGACCAAGCTTGCGAGCCCAATCAAGCGTGAGA CCGTTGAGCCCGCTGCCAACTTCACTGCCCCTGTCGCCAAGCCTGCCGTCGAGCCCGTTATCAAGCACGAGGACT TCCCGGAGGCCCCCAAGGCCGCTCCTGTCGCTCAGGCTCTCGAGTCTGGCATTGTTGCGTCTGTTGAGCCGGCAG AGCAGGCGAAGGGTCGTGAGCCTCTTCTGGCTATCTGA

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