Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5207.t1
Gene name
Locationscaffold_12:177686..178691
Strand-
Gene length (bp)1005
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.6E-50 32 250
PF00106 adh_short short chain dehydrogenase 1.2E-34 20 196

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5207.t1
MVLAQPPNQHVMKAFDLTGKVAVVTGGARGIGLEVALIYYTFDAADAVASEIASTNNVRAAAYKANVAVQSEIEA
VVQQVAKDFGKLDIMVVNSGIASNTAAEDYTPDQWHEIMKVNLDGAFYSAQAAGRIFKSQGHGNVIFTASASATL
VNLPQKQSAYNASKAGVVQLAKCLSVEWVDYCRVNCISPGYIATEILFTFPKEWRDKWLDLIPAKRMAESYELKG
AYVFCASDASSYMTGANLIIDGGYTLP*
Coding >Pro_DTO377G3_2|g5207.t1
ATGGTTCTCGCACAACCCCCAAACCAGCATGTTATGAAGGCATTCGACCTCACGGGCAAGGTCGCAGTTGTGACT
GGAGGCGCCCGTGGAATTGGTCTTGAAGTCGCCTTGATCTATTACACATTCGATGCCGCTGATGCAGTCGCATCC
GAGATTGCATCTACTAACAACGTACGCGCAGCAGCGTATAAAGCCAATGTTGCCGTCCAGTCTGAGATCGAGGCG
GTTGTGCAGCAGGTCGCGAAGGATTTCGGGAAGCTTGATATCATGGTCGTCAACTCTGGGATTGCCTCGAACACT
GCCGCCGAAGACTACACCCCCGATCAATGGCACGAGATCATGAAGGTCAATCTTGATGGTGCTTTCTATTCTGCC
CAAGCTGCCGGCCGGATCTTCAAGTCACAGGGTCATGGAAATGTTATATTCACGGCCTCTGCCAGCGCGACTCTG
GTCAATCTTCCACAGAAGCAATCGGCGTACAATGCGTCTAAGGCAGGAGTTGTTCAGCTCGCCAAGTGCTTGTCT
GTCGAGTGGGTTGACTACTGCCGAGTCAATTGCATCTCCCCTGGATACATCGCTACCGAAATTCTGTTCACCTTT
CCCAAAGAATGGCGCGACAAGTGGCTAGACTTGATCCCCGCCAAGAGAATGGCCGAATCTTATGAGTTGAAGGGG
GCCTACGTGTTCTGCGCTTCAGATGCGTCTAGCTATATGACAGGTGCAAACCTCATTATTGATGGAGGATACACT
TTGCCTTAG
Transcript >Pro_DTO377G3_2|g5207.t1
ATGGTTCTCGCACAACCCCCAAACCAGCATGTTATGAAGGCATTCGACCTCACGGGCAAGGTCGCAGTTGTGACT
GGAGGCGCCCGTGGAATTGGTCTTGAAGTCGCCTTGATCTATTACACATTCGATGCCGCTGATGCAGTCGCATCC
GAGATTGCATCTACTAACAACGTACGCGCAGCAGCGTATAAAGCCAATGTTGCCGTCCAGTCTGAGATCGAGGCG
GTTGTGCAGCAGGTCGCGAAGGATTTCGGGAAGCTTGATATCATGGTCGTCAACTCTGGGATTGCCTCGAACACT
GCCGCCGAAGACTACACCCCCGATCAATGGCACGAGATCATGAAGGTCAATCTTGATGGTGCTTTCTATTCTGCC
CAAGCTGCCGGCCGGATCTTCAAGTCACAGGGTCATGGAAATGTTATATTCACGGCCTCTGCCAGCGCGACTCTG
GTCAATCTTCCACAGAAGCAATCGGCGTACAATGCGTCTAAGGCAGGAGTTGTTCAGCTCGCCAAGTGCTTGTCT
GTCGAGTGGGTTGACTACTGCCGAGTCAATTGCATCTCCCCTGGATACATCGCTACCGAAATTCTGTTCACCTTT
CCCAAAGAATGGCGCGACAAGTGGCTAGACTTGATCCCCGCCAAGAGAATGGCCGAATCTTATGAGTTGAAGGGG
GCCTACGTGTTCTGCGCTTCAGATGCGTCTAGCTATATGACAGGTGCAAACCTCATTATTGATGGAGGATACACT
TTGCCTTAG
Gene >Pro_DTO377G3_2|g5207.t1
ATGGTTCTCGCACAACCCCCAAACCAGCATGTTATGAAGGCATTCGACCTCACGGGCAAGGTCGCAGTTGTGACT
GGTACGGTAGCTCCCAATTATAAAGGTCTCTCGAATAACACTTCATTACAGGAGGCGCCCGTGGAATTGGTCTTG
AAGTCTCGAGAGCGTTGGCCGAAGCGGGTGCAAATGCAAGTCACACTACGGAGTACCTGATGCTACAAAACAATC
AAACTAACAAAGTGCAAAGGTCGCCTTGATCTATTACACATTCGATGCCGCTGATGCAGTCGCATCCGAGATTGC
ATCTACTAACAACGTACGCGCAGCAGCGTATAAAGCCAATGTTGCCGTCCAGTCTGAGATCGAGGCGGTTGTGCA
GCAGGTCGCGAAGGATTTCGGGAAGCTTGATATCATGGTCGTCAACTCTGGGATTGCCTCGAACACTGCCGCCGA
AGACTACACCCCCGATCAATGGCACGAGATCATGAAGGTCAATCTTGATGGTGCTTTCTATTCTGCCCAAGCTGC
CGGCCGGATCTTCAAGTCACAGGGTCATGGAAATGTTATATTCACGGCCTCTGCCAGCGCGACTCTGGTCAATCT
TCCACAGAAGCAATCGGCGGTATGTTCTCTATTGGAAAGACTCCTTTTTCATGTCGCTAATCCTCGCATAGTACA
ATGCGTCTAAGGCAGGAGTTGTTCAGCTCGCCAAGTGCTTGTCTGTCGAGTGGGTTGACTACTGCCGAGTCAATT
GCATCTCCCCTGGATACATCGCTACCGAAATTCTGTTCACCTTTCCCAAAGAATGGCGCGACAAGTGGCTAGACT
TGATCCCCGCCAAGAGAATGGCCGAATCTTATGAGTTGAAGGGGGTACGATTCCACAAATCTAGTTCCCTAGAAA
CCAATTGACAATCTTATCTAGGCCTACGTGTTCTGCGCTTCAGATGCGTCTAGCTATATGACAGGTGCAAACCTC
ATTATTGATGGAGGATACACTTTGCCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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