Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g52.t1
Gene name
Locationscaffold_01:127839..128767
Strand+
Gene length (bp)928
Transcript length (bp)807
Coding sequence length (bp)807
Protein length (aa) 269

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 1.3E-46 41 257

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.5

Transmembrane Domains

Domain # Start End Length
1 55 77 22
2 92 114 22
3 121 143 22
4 153 175 22
5 218 235 17
6 245 262 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g52.t1
MEKTDAAATPDLEAPDVPARESSLAQRWKQNLTPTHADFVCLLLTFLTGLCDSSAYNAWSCFLGMQTGNTIFLGL
GASNQPTNKPWGWLKSLVSIASFFFGSMIFSLAMRTVGALRRGTLFISFLVQTLLIIIAVALIEADIIPHTSHDA
TLSGGPLFLELIPIALLAFQSAGGMTCSRALGYNEIPTVVLTSVYFDIASDPKITDKPTTNVKRNRRVAGVVCLL
VGAIVGGWLSRSSGGMQSALWMAAGLKFVAAIAWLFWKAAPAK*
Coding >Pro_DTO377G3_2|g52.t1
ATGGAGAAGACAGACGCCGCGGCTACACCCGATCTCGAAGCCCCAGACGTCCCTGCCAGAGAATCCAGCCTCGCC
CAACGATGGAAGCAGAACCTGACGCCCACTCACGCAGACTTTGTCTGTCTGCTCCTCACTTTCCTCACCGGTCTA
TGCGATAGCAGCGCCTACAATGCGTGGTCCTGCTTCCTCGGAATGCAAACCGGAAACACCATCTTCCTCGGCCTC
GGCGCCTCCAATCAACCAACTAACAAGCCATGGGGCTGGCTCAAGTCCCTCGTCTCGATCGCGTCCTTCTTCTTC
GGCTCGATGATCTTCTCGCTCGCGATGCGCACCGTCGGCGCCCTCCGCCGTGGAACCCTCTTCATCTCATTCCTC
GTGCAGACCCTGCTCATCATCATCGCCGTCGCCCTAATCGAAGCCGATATCATCCCCCACACCTCCCATGACGCC
ACCCTATCCGGTGGCCCGCTGTTCCTCGAGTTGATCCCGATCGCCCTGCTGGCTTTCCAATCCGCTGGTGGAATG
ACGTGCAGTCGTGCGCTGGGCTACAATGAGATCCCGACCGTGGTCTTGACGAGTGTCTACTTTGATATTGCGTCC
GATCCAAAGATCACCGATAAGCCGACGACGAACGTTAAGCGCAACCGTCGTGTTGCCGGCGTTGTGTGTCTCCTG
GTCGGTGCTATTGTCGGCGGCTGGCTGAGTCGTAGCAGTGGTGGTATGCAATCTGCGCTATGGATGGCTGCTGGT
TTGAAATTCGTTGCTGCGATTGCGTGGTTGTTCTGGAAGGCTGCGCCGGCGAAATAG
Transcript >Pro_DTO377G3_2|g52.t1
ATGGAGAAGACAGACGCCGCGGCTACACCCGATCTCGAAGCCCCAGACGTCCCTGCCAGAGAATCCAGCCTCGCC
CAACGATGGAAGCAGAACCTGACGCCCACTCACGCAGACTTTGTCTGTCTGCTCCTCACTTTCCTCACCGGTCTA
TGCGATAGCAGCGCCTACAATGCGTGGTCCTGCTTCCTCGGAATGCAAACCGGAAACACCATCTTCCTCGGCCTC
GGCGCCTCCAATCAACCAACTAACAAGCCATGGGGCTGGCTCAAGTCCCTCGTCTCGATCGCGTCCTTCTTCTTC
GGCTCGATGATCTTCTCGCTCGCGATGCGCACCGTCGGCGCCCTCCGCCGTGGAACCCTCTTCATCTCATTCCTC
GTGCAGACCCTGCTCATCATCATCGCCGTCGCCCTAATCGAAGCCGATATCATCCCCCACACCTCCCATGACGCC
ACCCTATCCGGTGGCCCGCTGTTCCTCGAGTTGATCCCGATCGCCCTGCTGGCTTTCCAATCCGCTGGTGGAATG
ACGTGCAGTCGTGCGCTGGGCTACAATGAGATCCCGACCGTGGTCTTGACGAGTGTCTACTTTGATATTGCGTCC
GATCCAAAGATCACCGATAAGCCGACGACGAACGTTAAGCGCAACCGTCGTGTTGCCGGCGTTGTGTGTCTCCTG
GTCGGTGCTATTGTCGGCGGCTGGCTGAGTCGTAGCAGTGGTGGTATGCAATCTGCGCTATGGATGGCTGCTGGT
TTGAAATTCGTTGCTGCGATTGCGTGGTTGTTCTGGAAGGCTGCGCCGGCGAAATAG
Gene >Pro_DTO377G3_2|g52.t1
ATGGAGAAGACAGACGCCGCGGCTACACCCGATCTCGAAGCCCCAGACGTCCCTGCCAGAGAATCCAGCCTCGCC
CAACGATGGAAGCAGAACCTGACGCCCACTCACGCAGACTTTGTCTGTCTGCTCCTCACTTTCCTCACCGGTCTA
TGCGATAGCAGCGCCTACAATGCGTGGTCCTGCTTCCTCGGAATGCAAACCGGTACGAGTCATACCCGCCGCTCC
CCCGCAAAGGGGGCGCAAACCCCAAACCAACAAAAAAAAACAAAAAACAAAAAACATCCGGAAACACAATAGAAA
CTAACAATCGCTCCTCAAAACAGGAAACACCATCTTCCTCGGCCTCGGCGCCTCCAATCAACCAACTAACAAGCC
ATGGGGCTGGCTCAAGTCCCTCGTCTCGATCGCGTCCTTCTTCTTCGGCTCGATGATCTTCTCGCTCGCGATGCG
CACCGTCGGCGCCCTCCGCCGTGGAACCCTCTTCATCTCATTCCTCGTGCAGACCCTGCTCATCATCATCGCCGT
CGCCCTAATCGAAGCCGATATCATCCCCCACACCTCCCATGACGCCACCCTATCCGGTGGCCCGCTGTTCCTCGA
GTTGATCCCGATCGCCCTGCTGGCTTTCCAATCCGCTGGTGGAATGACGTGCAGTCGTGCGCTGGGCTACAATGA
GATCCCGACCGTGGTCTTGACGAGTGTCTACTTTGATATTGCGTCCGATCCAAAGATCACCGATAAGCCGACGAC
GAACGTTAAGCGCAACCGTCGTGTTGCCGGCGTTGTGTGTCTCCTGGTCGGTGCTATTGTCGGCGGCTGGCTGAG
TCGTAGCAGTGGTGGTATGCAATCTGCGCTATGGATGGCTGCTGGTTTGAAATTCGTTGCTGCGATTGCGTGGTT
GTTCTGGAAGGCTGCGCCGGCGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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