Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5196.t1
Gene name
Locationscaffold_12:147510..148703
Strand-
Gene length (bp)1193
Transcript length (bp)981
Coding sequence length (bp)981
Protein length (aa) 327

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 2.6E-19 31 117
PF00153 Mito_carr Mitochondrial carrier protein 1.0E-18 131 225
PF00153 Mito_carr Mitochondrial carrier protein 4.0E-16 237 322

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 86 108 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5196.t1
MSSSTSPTAQQLENEINDIETKAVNQTIVQLRSLAAGAVGGLCAVVVGHPFDLVKVRLQTAEKGVYSGAMDVVRK
TVAREGLARGLYAGVSAPLVGVTPMFAVSFWGYDVGKTLVSKFSTVPVKNDTPQYSIAQISSAGFFSAIPMTLIT
APFERVKVLLQIQGQKQLAPGEKPQYSGGLDVVRQLYKEGGVRSVFRGSAMTLARDGPGSAAYFAAYEYIKRSLT
PKDAEGNVTGELSLSAVVCAGGAAGIAMWIPVFPVDTIKSRLQSAPGKPTMGGVIRSVYASGGLKAFFPGFGPAL
ARAVPANAATFLGVELAHKGMKKLFD*
Coding >Pro_DTO377G3_2|g5196.t1
ATGTCTTCCTCTACCTCCCCCACCGCGCAGCAGCTTGAGAATGAGATCAACGACATCGAGACCAAGGCCGTCAAC
CAGACAATTGTACAGCTGCGCTCTCTCGCAGCCGGTGCCGTTGGTGGTCTCTGCGCTGTCGTCGTTGGACACCCG
TTTGATCTAGTCAAGGTGCGCCTGCAGACGGCCGAAAAGGGAGTTTACTCAGGTGCCATGGATGTGGTCCGGAAG
ACGGTAGCCCGTGAAGGATTGGCTCGAGGATTGTATGCCGGTGTCTCTGCGCCGCTTGTTGGAGTTACTCCCATG
TTTGCCGTCAGCTTTTGGGGTTACGACGTGGGCAAGACTCTCGTGAGCAAGTTCTCTACCGTCCCAGTCAAGAAC
GACACCCCGCAGTACTCCATCGCACAAATCTCTTCTGCAGGCTTCTTCTCCGCCATCCCCATGACCCTGATCACG
GCACCCTTCGAGCGTGTCAAGGTCCTCCTCCAGATCCAGGGCCAGAAGCAACTGGCTCCGGGCGAGAAACCTCAG
TACTCCGGTGGTCTGGATGTCGTGCGCCAGCTGTACAAGGAAGGTGGTGTTCGCAGCGTGTTCCGTGGTAGCGCC
ATGACGTTGGCCCGTGATGGTCCCGGCTCGGCCGCCTACTTCGCGGCCTACGAGTACATCAAGCGCTCCTTGACC
CCCAAGGATGCCGAAGGCAACGTGACGGGCGAGCTCTCCCTATCTGCCGTTGTGTGCGCTGGTGGTGCTGCCGGT
ATCGCTATGTGGATCCCTGTCTTCCCCGTTGACACCATCAAGTCCCGCCTGCAGAGCGCACCGGGCAAGCCTACC
ATGGGTGGTGTTATCCGCTCGGTTTACGCTAGCGGCGGTTTGAAGGCCTTCTTCCCTGGATTCGGACCTGCTCTC
GCCCGTGCGGTGCCTGCCAATGCCGCCACTTTCCTCGGCGTTGAGCTGGCACACAAGGGCATGAAGAAGTTATTT
GACTAA
Transcript >Pro_DTO377G3_2|g5196.t1
ATGTCTTCCTCTACCTCCCCCACCGCGCAGCAGCTTGAGAATGAGATCAACGACATCGAGACCAAGGCCGTCAAC
CAGACAATTGTACAGCTGCGCTCTCTCGCAGCCGGTGCCGTTGGTGGTCTCTGCGCTGTCGTCGTTGGACACCCG
TTTGATCTAGTCAAGGTGCGCCTGCAGACGGCCGAAAAGGGAGTTTACTCAGGTGCCATGGATGTGGTCCGGAAG
ACGGTAGCCCGTGAAGGATTGGCTCGAGGATTGTATGCCGGTGTCTCTGCGCCGCTTGTTGGAGTTACTCCCATG
TTTGCCGTCAGCTTTTGGGGTTACGACGTGGGCAAGACTCTCGTGAGCAAGTTCTCTACCGTCCCAGTCAAGAAC
GACACCCCGCAGTACTCCATCGCACAAATCTCTTCTGCAGGCTTCTTCTCCGCCATCCCCATGACCCTGATCACG
GCACCCTTCGAGCGTGTCAAGGTCCTCCTCCAGATCCAGGGCCAGAAGCAACTGGCTCCGGGCGAGAAACCTCAG
TACTCCGGTGGTCTGGATGTCGTGCGCCAGCTGTACAAGGAAGGTGGTGTTCGCAGCGTGTTCCGTGGTAGCGCC
ATGACGTTGGCCCGTGATGGTCCCGGCTCGGCCGCCTACTTCGCGGCCTACGAGTACATCAAGCGCTCCTTGACC
CCCAAGGATGCCGAAGGCAACGTGACGGGCGAGCTCTCCCTATCTGCCGTTGTGTGCGCTGGTGGTGCTGCCGGT
ATCGCTATGTGGATCCCTGTCTTCCCCGTTGACACCATCAAGTCCCGCCTGCAGAGCGCACCGGGCAAGCCTACC
ATGGGTGGTGTTATCCGCTCGGTTTACGCTAGCGGCGGTTTGAAGGCCTTCTTCCCTGGATTCGGACCTGCTCTC
GCCCGTGCGGTGCCTGCCAATGCCGCCACTTTCCTCGGCGTTGAGCTGGCACACAAGGGCATGAAGAAGTTATTT
GACTAA
Gene >Pro_DTO377G3_2|g5196.t1
ATGTCTTCCTCTACCTCCCCCACCGCGCAGCAGCTTGAGAATGAGATCAACGACATCGAGACCAAGGCCGTCAAC
CAGACAATTGTACAGCTGCGCTCTCTCGCAGCCGGTGCCGTTGGTGGTCTCTGCGCTGTCGTCGTTGGACACCCG
TTTGATCTAGTCAAGGTGCGCCTGCAGACGGCCGAAAAGGGAGTTTACTCAGGTGCCATGGATGTGGTCCGGAAG
ACGGTAGCCCGTGAAGGATTGGCTCGAGTATGATCACCACAAGCACATTGAATACTTTGCGACCGAACTGACAAT
GGTTCCTAGGGATTGTATGCCGGTGTCTCTGCGCCGCTTGTTGGAGTTACTCCCATGTGTAAGTACTCTAGCATG
CGCCATAATGGCTCTCACATCTGAAATTGATCGAGTTATGAGCTAATCAGTCCTGTCTCACAGTTGCCGTCAGCT
TTTGGGTTCGTCTTTTTTTCTTTTTCTCTGCGCCCGCAGCTGCGAGCGCCCGTCCGGAAGCGATACTAACAACAA
ATTAGGGTTACGACGTGGGCAAGACTCTCGTGAGCAAGTTCTCTACCGTCCCAGTCAAGAACGACACCCCGCAGT
ACTCCATCGCACAAATCTCTTCTGCAGGCTTCTTCTCCGCCATCCCCATGACCCTGATCACGGCACCCTTCGAGC
GTGTCAAGGTCCTCCTCCAGATCCAGGGCCAGAAGCAACTGGCTCCGGGCGAGAAACCTCAGTACTCCGGTGGTC
TGGATGTCGTGCGCCAGCTGTACAAGGAAGGTGGTGTTCGCAGCGTGTTCCGTGGTAGCGCCATGACGTTGGCCC
GTGATGGTCCCGGCTCGGCCGCCTACTTCGCGGCCTACGAGTACATCAAGCGCTCCTTGACCCCCAAGGATGCCG
AAGGCAACGTGACGGGCGAGCTCTCCCTATCTGCCGTTGTGTGCGCTGGTGGTGCTGCCGGTATCGCTATGTGGA
TCCCTGTCTTCCCCGTTGACACCATCAAGTCCCGCCTGCAGAGCGCACCGGGCAAGCCTACCATGGGTGGTGTTA
TCCGCTCGGTTTACGCTAGCGGCGGTTTGAAGGCCTTCTTCCCTGGATTCGGACCTGCTCTCGCCCGTGCGGTGC
CTGCCAATGCCGCCACTTTCCTCGGCGTTGAGCTGGCACACAAGGGCATGAAGAAGTTATTTGACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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