Protein ID | Pro_DTO377G3_2|g5191.t1 |
Gene name | |
Location | scaffold_12:139104..140358 |
Strand | + |
Gene length (bp) | 1254 |
Transcript length (bp) | 1254 |
Coding sequence length (bp) | 1254 |
Protein length (aa) | 418 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 1.3E-37 | 33 | 300 |
Orthofinder run ID | 2 |
Orthogroup | 5371 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5191.t1 MSSASASTAKSPYADEVVRGGYAKIFEGHTVFLTGGTGCLGGCLLYKLALQLPTRKIFVLVRGNSQRAIGKLRES IPNHAQAILATNKVEFVIGDMKTVNFGIEATILQQLQDQVTLVIHTAAKIKLEGPIRDALENNCLPALEMARIAS RFRRLKLLIQISTSYVNSHRPDGTVLERIYQLGGKEDAEEELASILTLGTSPHAGKFSSTYTQAKHLMERLLLSR FPLLPILLLRPTIFGPALRYPYSLYGPEDSTPLNKFTRLWFSDRGATQVWHATEGYKTGANILDEIPVDLVANAC LLHAAARTTGIVQIGSQLYHPITFDEIFRMGLENATPAAQREFPKIIFTEDRSTPQCFLAELIQVGTRNWLFDCG RSYWLKQVSGPLSMQVCKHEADALNLTRTHDVLGALKEKARI* |
Coding | >Pro_DTO377G3_2|g5191.t1 ATGTCATCAGCTTCAGCTTCGACCGCAAAATCACCGTATGCCGACGAAGTCGTGCGAGGAGGATATGCAAAAATA TTTGAGGGCCATACAGTCTTCCTCACCGGAGGTACTGGCTGCCTAGGGGGTTGTCTCCTCTACAAGCTAGCTCTG CAACTGCCAACTCGCAAGATTTTCGTTCTGGTAAGGGGGAACTCCCAGCGGGCTATTGGAAAACTGAGGGAATCG ATACCAAATCATGCACAGGCTATTTTAGCCACGAACAAAGTCGAGTTTGTGATTGGAGATATGAAGACGGTGAAC TTTGGGATTGAAGCTACTATCCTTCAGCAACTTCAAGATCAAGTGACCCTGGTCATTCATACAGCAGCCAAGATC AAACTTGAAGGTCCCATTCGTGATGCACTGGAGAACAATTGTCTCCCTGCGCTGGAAATGGCACGGATTGCCTCT AGATTCCGGCGACTGAAACTCCTCATCCAGATCTCTACGTCATACGTCAATAGTCATCGTCCGGATGGCACGGTT TTAGAGCGGATATATCAATTGGGAGGCAAAGAAGATGCAGAGGAAGAACTGGCATCCATATTGACGCTGGGCACA TCACCTCACGCGGGCAAATTCTCATCTACCTACACCCAAGCCAAGCATCTCATGGAACGTCTACTACTCAGCCGC TTCCCTCTTCTTCCAATTCTACTGCTACGGCCAACAATCTTCGGTCCTGCGCTCAGATACCCTTACTCGCTATAT GGACCGGAGGACTCCACGCCTCTCAACAAGTTTACTAGGCTTTGGTTCTCTGATCGAGGCGCCACGCAAGTTTGG CATGCCACGGAAGGCTATAAAACAGGCGCCAATATCCTAGACGAGATTCCCGTGGACCTCGTAGCAAACGCATGT CTATTGCACGCAGCAGCACGGACTACGGGCATTGTCCAGATTGGTTCCCAGCTCTATCATCCGATTACCTTCGAT GAGATCTTCCGAATGGGCCTGGAAAATGCCACGCCTGCAGCCCAGCGAGAGTTTCCGAAGATCATATTTACCGAA GATCGCAGCACACCGCAATGCTTTCTTGCGGAATTGATTCAAGTAGGAACTCGCAACTGGTTATTCGATTGCGGG CGGTCCTACTGGCTCAAACAGGTGAGCGGGCCATTGAGCATGCAGGTTTGCAAGCATGAGGCAGATGCTCTGAAT TTGACACGGACTCACGATGTCCTCGGGGCTCTAAAGGAGAAAGCTCGGATCTGA |
Transcript | >Pro_DTO377G3_2|g5191.t1 ATGTCATCAGCTTCAGCTTCGACCGCAAAATCACCGTATGCCGACGAAGTCGTGCGAGGAGGATATGCAAAAATA TTTGAGGGCCATACAGTCTTCCTCACCGGAGGTACTGGCTGCCTAGGGGGTTGTCTCCTCTACAAGCTAGCTCTG CAACTGCCAACTCGCAAGATTTTCGTTCTGGTAAGGGGGAACTCCCAGCGGGCTATTGGAAAACTGAGGGAATCG ATACCAAATCATGCACAGGCTATTTTAGCCACGAACAAAGTCGAGTTTGTGATTGGAGATATGAAGACGGTGAAC TTTGGGATTGAAGCTACTATCCTTCAGCAACTTCAAGATCAAGTGACCCTGGTCATTCATACAGCAGCCAAGATC AAACTTGAAGGTCCCATTCGTGATGCACTGGAGAACAATTGTCTCCCTGCGCTGGAAATGGCACGGATTGCCTCT AGATTCCGGCGACTGAAACTCCTCATCCAGATCTCTACGTCATACGTCAATAGTCATCGTCCGGATGGCACGGTT TTAGAGCGGATATATCAATTGGGAGGCAAAGAAGATGCAGAGGAAGAACTGGCATCCATATTGACGCTGGGCACA TCACCTCACGCGGGCAAATTCTCATCTACCTACACCCAAGCCAAGCATCTCATGGAACGTCTACTACTCAGCCGC TTCCCTCTTCTTCCAATTCTACTGCTACGGCCAACAATCTTCGGTCCTGCGCTCAGATACCCTTACTCGCTATAT GGACCGGAGGACTCCACGCCTCTCAACAAGTTTACTAGGCTTTGGTTCTCTGATCGAGGCGCCACGCAAGTTTGG CATGCCACGGAAGGCTATAAAACAGGCGCCAATATCCTAGACGAGATTCCCGTGGACCTCGTAGCAAACGCATGT CTATTGCACGCAGCAGCACGGACTACGGGCATTGTCCAGATTGGTTCCCAGCTCTATCATCCGATTACCTTCGAT GAGATCTTCCGAATGGGCCTGGAAAATGCCACGCCTGCAGCCCAGCGAGAGTTTCCGAAGATCATATTTACCGAA GATCGCAGCACACCGCAATGCTTTCTTGCGGAATTGATTCAAGTAGGAACTCGCAACTGGTTATTCGATTGCGGG CGGTCCTACTGGCTCAAACAGGTGAGCGGGCCATTGAGCATGCAGGTTTGCAAGCATGAGGCAGATGCTCTGAAT TTGACACGGACTCACGATGTCCTCGGGGCTCTAAAGGAGAAAGCTCGGATCTGA |
Gene | >Pro_DTO377G3_2|g5191.t1 ATGTCATCAGCTTCAGCTTCGACCGCAAAATCACCGTATGCCGACGAAGTCGTGCGAGGAGGATATGCAAAAATA TTTGAGGGCCATACAGTCTTCCTCACCGGAGGTACTGGCTGCCTAGGGGGTTGTCTCCTCTACAAGCTAGCTCTG CAACTGCCAACTCGCAAGATTTTCGTTCTGGTAAGGGGGAACTCCCAGCGGGCTATTGGAAAACTGAGGGAATCG ATACCAAATCATGCACAGGCTATTTTAGCCACGAACAAAGTCGAGTTTGTGATTGGAGATATGAAGACGGTGAAC TTTGGGATTGAAGCTACTATCCTTCAGCAACTTCAAGATCAAGTGACCCTGGTCATTCATACAGCAGCCAAGATC AAACTTGAAGGTCCCATTCGTGATGCACTGGAGAACAATTGTCTCCCTGCGCTGGAAATGGCACGGATTGCCTCT AGATTCCGGCGACTGAAACTCCTCATCCAGATCTCTACGTCATACGTCAATAGTCATCGTCCGGATGGCACGGTT TTAGAGCGGATATATCAATTGGGAGGCAAAGAAGATGCAGAGGAAGAACTGGCATCCATATTGACGCTGGGCACA TCACCTCACGCGGGCAAATTCTCATCTACCTACACCCAAGCCAAGCATCTCATGGAACGTCTACTACTCAGCCGC TTCCCTCTTCTTCCAATTCTACTGCTACGGCCAACAATCTTCGGTCCTGCGCTCAGATACCCTTACTCGCTATAT GGACCGGAGGACTCCACGCCTCTCAACAAGTTTACTAGGCTTTGGTTCTCTGATCGAGGCGCCACGCAAGTTTGG CATGCCACGGAAGGCTATAAAACAGGCGCCAATATCCTAGACGAGATTCCCGTGGACCTCGTAGCAAACGCATGT CTATTGCACGCAGCAGCACGGACTACGGGCATTGTCCAGATTGGTTCCCAGCTCTATCATCCGATTACCTTCGAT GAGATCTTCCGAATGGGCCTGGAAAATGCCACGCCTGCAGCCCAGCGAGAGTTTCCGAAGATCATATTTACCGAA GATCGCAGCACACCGCAATGCTTTCTTGCGGAATTGATTCAAGTAGGAACTCGCAACTGGTTATTCGATTGCGGG CGGTCCTACTGGCTCAAACAGGTGAGCGGGCCATTGAGCATGCAGGTTTGCAAGCATGAGGCAGATGCTCTGAAT TTGACACGGACTCACGATGTCCTCGGGGCTCTAAAGGAGAAAGCTCGGATCTGA |