Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5188.t1
Gene name
Locationscaffold_12:131049..133420
Strand+
Gene length (bp)2371
Transcript length (bp)2148
Coding sequence length (bp)2148
Protein length (aa) 716

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12657 TFIIIC_delta Transcription factor IIIC subunit delta N-term 8.5E-36 11 166
PF12660 zf-TFIIIC Putative zinc-finger of transcription factor IIIC complex 6.5E-31 615 711

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5188.t1
MLNPVTLSLSPSCHDAISWSPDGELAIAAGEYFQILTPKTSRDEDSAPNSTQDWLITRVRANLFTNSEWPNYLPG
NRDDFSVAADLSESNVVGLAWSPAGLGKYRRSVLAVLTSNLVLSLWEPIGLKKQWTRVAITNHVFWSQLQPSQDP
SSHAFRKVNIRSFTWCESLKPSTPTAGASFLHSHESRWGIPLLMVVNDFNEVMLVQVRRSDPTNSPSKPYDLQIL
AFHSLKNPETKDSPFCSGSLFEKAMKERQRTTVLSCGPWQISPATSLGNFGCAVTMIAAVCGTQLRLMKLKVTLG
SELGETSQQYTLSADLTEHPLDQLNEKWAYHNIAGPIRWLHTRSSTTIVLAVGAMAAFIAISMPYDTYTGSVSNS
DAFVFHDYPIYEPQTEDNKGHQARHLEPISAMLTSVNEQSDTCKLYLGTLGGIGLVTELRQLQSNSALQQPKWKR
MIEEFQDDYDLEHDLGGMSVSRIWGLAAYRNMTAAIFTSHPTDMIEYRITSDDRSMVVFSEESGPTINTQALFAA
QIPDDHNQTGEVIRFVLPGEDGNIEPDMESQRLLYAVACRSIVGEEDKSLRLHTRRSLERLAVVTGADLSDEISK
CNSNPVPVSAKTMDQVTGPGGHIYEKCEVCNAGIGWPSAQLAQCANGHLWERCGLSFLAIQGPGISKYCFVCRKE
ALDEELVACMCGGKQGRTFDALFETFDICLHCAAKFQASY*
Coding >Pro_DTO377G3_2|g5188.t1
ATGCTGAACCCTGTGACCCTGTCATTATCTCCGTCTTGCCATGACGCCATTTCTTGGTCCCCGGACGGTGAGCTT
GCTATCGCTGCGGGTGAATACTTTCAAATCCTGACACCAAAAACTAGCAGAGATGAGGACTCTGCCCCCAACTCA
ACCCAAGATTGGCTCATAACTCGTGTTAGAGCCAACTTGTTTACGAACTCTGAATGGCCGAACTACCTTCCGGGA
AATCGAGATGATTTCTCGGTCGCTGCAGACCTTTCAGAAAGCAATGTGGTCGGTCTCGCTTGGTCCCCAGCAGGA
CTAGGCAAATATCGACGTAGTGTCCTAGCCGTGCTGACGTCTAATCTGGTATTGTCCCTCTGGGAGCCCATTGGC
CTTAAGAAGCAATGGACCAGGGTTGCCATCACCAATCATGTATTTTGGTCACAGCTGCAGCCATCACAGGACCCA
AGTAGCCATGCCTTTCGGAAGGTTAACATTCGATCTTTCACTTGGTGCGAGTCTTTGAAGCCATCAACGCCTACC
GCGGGCGCTTCCTTTTTACATTCGCACGAAAGCCGCTGGGGAATTCCACTGCTAATGGTTGTGAACGATTTCAAT
GAAGTCATGCTAGTGCAGGTTCGCAGATCAGACCCAACGAATAGCCCTTCCAAGCCCTATGATCTTCAGATTCTG
GCGTTTCACTCTCTAAAGAACCCGGAAACCAAGGACAGTCCGTTCTGCTCTGGATCGCTCTTCGAGAAGGCAATG
AAAGAGAGACAACGTACTACTGTGCTTTCCTGTGGTCCGTGGCAGATTTCACCCGCGACGAGCCTGGGGAACTTT
GGCTGCGCAGTCACCATGATAGCTGCGGTATGCGGAACGCAGCTTCGGCTAATGAAACTCAAAGTGACTCTCGGG
AGCGAGCTCGGGGAGACTTCACAACAGTACACGTTAAGCGCCGATTTGACAGAGCATCCCCTGGATCAATTGAAT
GAGAAATGGGCATATCACAACATCGCTGGCCCTATTAGATGGCTCCATACCAGATCATCCACAACCATTGTCCTG
GCAGTGGGCGCCATGGCAGCATTCATCGCCATATCTATGCCCTACGATACGTACACAGGTAGCGTTAGCAATTCT
GATGCCTTCGTATTTCATGACTATCCAATCTACGAGCCACAAACCGAGGACAACAAGGGCCATCAAGCAAGGCAC
CTGGAGCCAATTTCGGCAATGCTCACTTCCGTGAATGAACAAAGCGACACATGCAAGCTCTACTTAGGTACACTC
GGTGGAATTGGCTTAGTCACAGAACTTCGCCAACTACAAAGCAACAGCGCTCTGCAACAACCAAAATGGAAACGC
ATGATTGAAGAGTTTCAGGATGACTATGACTTAGAGCACGACTTGGGAGGAATGTCAGTTTCCAGGATTTGGGGA
CTCGCAGCCTATCGCAACATGACTGCGGCTATCTTCACTTCACATCCCACGGACATGATCGAGTATCGCATCACC
TCTGACGACAGGTCTATGGTTGTCTTTTCAGAAGAGAGTGGACCCACGATCAATACCCAAGCCCTATTTGCGGCG
CAAATCCCCGATGATCATAACCAGACAGGAGAAGTGATACGTTTCGTGCTACCTGGTGAGGACGGCAATATTGAA
CCCGACATGGAGAGTCAACGCCTGCTTTATGCCGTAGCTTGTCGTTCCATTGTGGGTGAAGAGGACAAGTCGCTT
CGGCTTCATACTCGGCGGTCTCTAGAGCGTCTAGCAGTAGTAACAGGCGCGGACCTGAGCGATGAGATTTCCAAA
TGCAACAGCAACCCCGTCCCGGTATCTGCGAAGACTATGGATCAGGTCACTGGCCCAGGCGGCCACATTTATGAG
AAGTGCGAAGTTTGTAATGCGGGAATTGGGTGGCCCTCAGCCCAGTTGGCTCAGTGCGCCAATGGCCATCTTTGG
GAACGATGTGGATTGTCCTTCCTTGCCATTCAAGGACCTGGGATATCCAAGTATTGTTTTGTCTGTCGCAAAGAA
GCTCTCGATGAAGAACTCGTGGCATGCATGTGTGGAGGAAAGCAAGGTCGAACATTCGATGCTCTCTTTGAGACG
TTTGATATCTGCTTACACTGCGCAGCCAAATTCCAGGCCAGTTACTAG
Transcript >Pro_DTO377G3_2|g5188.t1
ATGCTGAACCCTGTGACCCTGTCATTATCTCCGTCTTGCCATGACGCCATTTCTTGGTCCCCGGACGGTGAGCTT
GCTATCGCTGCGGGTGAATACTTTCAAATCCTGACACCAAAAACTAGCAGAGATGAGGACTCTGCCCCCAACTCA
ACCCAAGATTGGCTCATAACTCGTGTTAGAGCCAACTTGTTTACGAACTCTGAATGGCCGAACTACCTTCCGGGA
AATCGAGATGATTTCTCGGTCGCTGCAGACCTTTCAGAAAGCAATGTGGTCGGTCTCGCTTGGTCCCCAGCAGGA
CTAGGCAAATATCGACGTAGTGTCCTAGCCGTGCTGACGTCTAATCTGGTATTGTCCCTCTGGGAGCCCATTGGC
CTTAAGAAGCAATGGACCAGGGTTGCCATCACCAATCATGTATTTTGGTCACAGCTGCAGCCATCACAGGACCCA
AGTAGCCATGCCTTTCGGAAGGTTAACATTCGATCTTTCACTTGGTGCGAGTCTTTGAAGCCATCAACGCCTACC
GCGGGCGCTTCCTTTTTACATTCGCACGAAAGCCGCTGGGGAATTCCACTGCTAATGGTTGTGAACGATTTCAAT
GAAGTCATGCTAGTGCAGGTTCGCAGATCAGACCCAACGAATAGCCCTTCCAAGCCCTATGATCTTCAGATTCTG
GCGTTTCACTCTCTAAAGAACCCGGAAACCAAGGACAGTCCGTTCTGCTCTGGATCGCTCTTCGAGAAGGCAATG
AAAGAGAGACAACGTACTACTGTGCTTTCCTGTGGTCCGTGGCAGATTTCACCCGCGACGAGCCTGGGGAACTTT
GGCTGCGCAGTCACCATGATAGCTGCGGTATGCGGAACGCAGCTTCGGCTAATGAAACTCAAAGTGACTCTCGGG
AGCGAGCTCGGGGAGACTTCACAACAGTACACGTTAAGCGCCGATTTGACAGAGCATCCCCTGGATCAATTGAAT
GAGAAATGGGCATATCACAACATCGCTGGCCCTATTAGATGGCTCCATACCAGATCATCCACAACCATTGTCCTG
GCAGTGGGCGCCATGGCAGCATTCATCGCCATATCTATGCCCTACGATACGTACACAGGTAGCGTTAGCAATTCT
GATGCCTTCGTATTTCATGACTATCCAATCTACGAGCCACAAACCGAGGACAACAAGGGCCATCAAGCAAGGCAC
CTGGAGCCAATTTCGGCAATGCTCACTTCCGTGAATGAACAAAGCGACACATGCAAGCTCTACTTAGGTACACTC
GGTGGAATTGGCTTAGTCACAGAACTTCGCCAACTACAAAGCAACAGCGCTCTGCAACAACCAAAATGGAAACGC
ATGATTGAAGAGTTTCAGGATGACTATGACTTAGAGCACGACTTGGGAGGAATGTCAGTTTCCAGGATTTGGGGA
CTCGCAGCCTATCGCAACATGACTGCGGCTATCTTCACTTCACATCCCACGGACATGATCGAGTATCGCATCACC
TCTGACGACAGGTCTATGGTTGTCTTTTCAGAAGAGAGTGGACCCACGATCAATACCCAAGCCCTATTTGCGGCG
CAAATCCCCGATGATCATAACCAGACAGGAGAAGTGATACGTTTCGTGCTACCTGGTGAGGACGGCAATATTGAA
CCCGACATGGAGAGTCAACGCCTGCTTTATGCCGTAGCTTGTCGTTCCATTGTGGGTGAAGAGGACAAGTCGCTT
CGGCTTCATACTCGGCGGTCTCTAGAGCGTCTAGCAGTAGTAACAGGCGCGGACCTGAGCGATGAGATTTCCAAA
TGCAACAGCAACCCCGTCCCGGTATCTGCGAAGACTATGGATCAGGTCACTGGCCCAGGCGGCCACATTTATGAG
AAGTGCGAAGTTTGTAATGCGGGAATTGGGTGGCCCTCAGCCCAGTTGGCTCAGTGCGCCAATGGCCATCTTTGG
GAACGATGTGGATTGTCCTTCCTTGCCATTCAAGGACCTGGGATATCCAAGTATTGTTTTGTCTGTCGCAAAGAA
GCTCTCGATGAAGAACTCGTGGCATGCATGTGTGGAGGAAAGCAAGGTCGAACATTCGATGCTCTCTTTGAGACG
TTTGATATCTGCTTACACTGCGCAGCCAAATTCCAGGCCAGTTACTAG
Gene >Pro_DTO377G3_2|g5188.t1
ATGCTGAACCCTGTGACCCTGTCATTATCTCCGTCTTGCCATGACGCCATTTCTTGGTCCCCGGACGGTGAGCTT
GCTATCGCTGCGGGTGAATACTTTCAAATCCTGGTATTTATCTAGTTATCCGATGAGCTTCAATATAATTGACAT
TTTGATAGACACCAAAAACTAGCAGAGATGAGGACTCTGCCCCCAACTCAACCCAAGATTGGCTCATAACTCGTG
TTAGAGCCAACTTGTTTACGAACTCTGAATGGCCGAACTACCTTCCGGGAAATCGAGATGATTTCTCGGTCGCTG
CAGACCTTTCAGAAAGCAATGTGGTCGGTCTCGCTTGGTCCCCAGCAGGACTAGGCAAATATCGACGTAGTGTCC
TAGCCGTGCTGACGTCTAATCTGGTATTGTCCCTCTGGGAGCCCATTGGCCTTAAGAAGCAATGGACCAGGGTTG
CCATCACCAATCATGTATTTTGGTCACAGCTGCAGCCATCACAGGACCCAAGTAGCCATGCCTTTCGGAAGGTTA
ACATTCGATCTTTCACTTGGTGCGAGTCTTTGAAGCCATCAACGCCTACCGCGGGCGCTTCCTTTTTACATTCGC
ACGAAAGCCGCTGGGGAATTCCACTGCTAATGGTTGTGAACGATTTCAATGAAGTCATGCTAGTGCAGGTTCGCA
GATCAGACCCAACGAATAGCCCTTCCAAGCCCTATGATCTTCAGATTCTGGCGTTTCACTCTCTAAAGAACCCGG
AAACCAAGGACAGTCCGTTCTGCTCTGGATCGCTCTTCGAGAAGGCAATGAAAGAGAGACAACGTACTACTGTGC
TTTCCTGTGGTCCGTGGCAGATTTCACCCGCGACGAGCCTGGGGAACTTTGGCTGCGCAGTCACCATGATAGCTG
CGGTATGCGGAACGCAGCTTCGGCTAATGAAACTCAAAGTGACTCTCGGGAGCGAGCTCGGGGAGACTTCACAAC
AGTACACGTTAAGCGCCGATTTGACAGAGCATCCCCTGGATCAATTGAATGAGAAATGGGCATATCACAACATCG
CTGGCCCTATTAGATGGCTCCATACCGTACGTTCGATTTCTTACATCCATGCTAAAATGCGCCATTTCTCTAATA
AAAGCCTAACAGAGATCATCCACAACCATTGTCCTGGCAGTGGGCGCCATGGCAGCATTCATCGCCATATCTATG
CCCTACGATACGTACACAGGTAGCGTTAGCAATTCTGATGCCTTCGTATTTCATGACTATCCAATCTACGAGCCA
CAAACCGAGGACAACAAGGGCCATCAAGCAAGGCACCTGGAGCCAATTTCGGGTATGTTATTTAAAGACCTATGA
GGCCCTTTCAGCACTTCTGACCAGCTATAGCAATGCTCACTTCCGTGAATGAACAAAGCGACACATGCAAGCTCT
ACTTAGGTACACTCGGTGGAATTGGCTTAGTCACAGAACTTCGCCAACTACAAAGCAACAGCGCTCTGCAACAAC
CAAAATGGAAACGCATGATTGAAGAGTTTCAGGATGACTATGACTTAGAGCACGACTTGGGAGGAATGTCAGTTT
CCAGGATTTGGGGACTCGCAGCCTATCGCAACATGACTGCGGCTATCTTCACTTCACATCCCACGGACATGATCG
AGTATCGCATCACCTCTGACGACAGGTCTATGGTTGTCTTTTCAGAAGAGAGTGGACCCACGATCAATACCCAAG
CCCTATTTGCGGCGCAAATCCCCGATGATCATAACCAGACAGGAGAAGTGATACGTTTCGTGCTACCTGGTGAGG
ACGGCAATATTGAACCCGACATGGAGAGTCAACGCCTGCTTTATGCCGTAGCTTGTCGTTCCATTGTGGGTGAAG
AGGACAAGTCGCTTCGGCTTCATACTCGGCGGTCTCTAGAGCGTCTAGCAGTAGTAACAGGCGCGGACCTGAGCG
ATGAGATTTCCAAATGCAACAGCAACCCCGTCCCGGTATCTGCGAAGACTATGGATCAGGTCACTGGCCCAGGCG
GCCACATTTATGAGAAGTGCGAAGTTTGTAATGCGGGAATTGGGTGGCCCTCAGCCCAGTTGGCTCAGTGCGCCA
ATGGCCATCTTTGGGGTAAGTCACCTCATGGTTTGAATTTGATAGTAACGTGCTGACAGTTTTCATTCATATAGA
ACGATGTGGATTGTCCTTCCTTGCCATTCAAGGACCTGGGATATCCAAGTATTGTTTTGTCTGTCGCAAAGAAGC
TCTCGATGAAGAACTCGTGGCATGCATGTGTGGAGGAAAGCAAGGTCGAACATTCGATGCTCTCTTTGAGACGTT
TGATATCTGCTTACACTGCGCAGCCAAATTCCAGGCCAGTTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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